| Literature DB >> 21202964 |
B Thimme Gowda, Sabine Foro, B P Sowmya, Hartmut Fuess.
Abstract
Two independent mol-ecules comprise the asymmetric unit in the title compound, C(13)H(8)Cl(3)NO, each with the amide N-H and C=O bonds trans to each other. The mol-ecules are linked into chains through inter-molecular N-H⋯O and N-H⋯Cl hydrogen bonds.Entities:
Year: 2008 PMID: 21202964 PMCID: PMC2961795 DOI: 10.1107/S1600536808018679
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H8Cl3NO | |
| Monoclinic, | Mo |
| Hall symbol: P -2yc | Cell parameters from 3409 reflections |
| θ = 2.6–27.5º | |
| µ = 0.69 mm−1 | |
| β = 111.52 (1)º | Thick plate, colourless |
| 0.75 × 0.75 × 0.18 mm | |
| Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector | 3936 independent reflections |
| Radiation source: fine-focus sealed tube | 3430 reflections with |
| Monochromator: graphite | |
| θmax = 26.4º | |
| Rotation method data acquisition using ω and φ scans | θmin = 2.6º |
| Absorption correction: multi-scan(CrysAlis RED; Oxford Diffraction, 2007) | |
| 5882 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| | |
| (Δ/σ)max = 0.003 | |
| Δρmax = 0.29 e Å−3 | |
| 3936 reflections | Δρmin = −0.28 e Å−3 |
| 326 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 2 restraints | Extinction coefficient: 0.0118 (14) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: (Flack, 1983), 365 Friedel pairs |
| Secondary atom site location: difference Fourier map | Flack parameter: 0.12 (5) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.80355 (8) | −0.16289 (10) | 0.22458 (7) | 0.0542 (2) | |
| Cl2 | 0.53668 (10) | −0.25096 (14) | 0.12596 (9) | 0.0739 (3) | |
| Cl3 | 1.08381 (10) | 0.01157 (12) | 0.38808 (9) | 0.0745 (3) | |
| O1 | 0.8488 (2) | 0.4258 (3) | 0.36026 (18) | 0.0537 (6) | |
| N1 | 0.8566 (2) | 0.2051 (3) | 0.26179 (19) | 0.0411 (6) | |
| H1N | 0.9028 | 0.1426 | 0.2437 | 0.049* | |
| C1 | 0.7362 (3) | 0.1682 (4) | 0.2183 (2) | 0.0359 (6) | |
| C2 | 0.7006 (3) | −0.0018 (4) | 0.1965 (2) | 0.0420 (7) | |
| C3 | 0.5819 (3) | −0.0414 (5) | 0.1521 (3) | 0.0493 (8) | |
| C4 | 0.4996 (3) | 0.0858 (5) | 0.1303 (3) | 0.0566 (9) | |
| H4 | 0.4206 | 0.0589 | 0.1018 | 0.068* | |
| C5 | 0.5342 (4) | 0.2543 (5) | 0.1510 (3) | 0.0597 (10) | |
| H5 | 0.4783 | 0.3403 | 0.1357 | 0.072* | |
| C6 | 0.6515 (3) | 0.2954 (5) | 0.1941 (3) | 0.0498 (8) | |
| H6 | 0.6738 | 0.4091 | 0.2071 | 0.060* | |
| C7 | 0.9063 (3) | 0.3294 (4) | 0.3292 (2) | 0.0388 (7) | |
| C8 | 1.0362 (3) | 0.3540 (4) | 0.3601 (2) | 0.0379 (7) | |
| C9 | 1.1208 (3) | 0.2248 (5) | 0.3829 (3) | 0.0478 (8) | |
| C10 | 1.2384 (4) | 0.2639 (6) | 0.4080 (3) | 0.0613 (10) | |
| H10 | 1.2936 | 0.1769 | 0.4226 | 0.074* | |
| C11 | 1.2727 (3) | 0.4310 (6) | 0.4112 (3) | 0.0629 (10) | |
| H11 | 1.3513 | 0.4569 | 0.4276 | 0.076* | |
| C12 | 1.1924 (4) | 0.5604 (5) | 0.3904 (3) | 0.0576 (9) | |
| H12 | 1.2164 | 0.6735 | 0.3931 | 0.069* | |
| C13 | 1.0746 (3) | 0.5220 (4) | 0.3654 (3) | 0.0455 (7) | |
| H13 | 1.0206 | 0.6104 | 0.3519 | 0.055* | |
| Cl4 | 0.61868 (9) | 0.43793 (11) | −0.06792 (10) | 0.0700 (3) | |
| Cl5 | 0.41892 (8) | 0.16238 (16) | −0.14120 (9) | 0.0747 (3) | |
| Cl6 | 1.22481 (9) | 0.23655 (14) | 0.13296 (10) | 0.0727 (3) | |
| O2 | 0.9822 (2) | 0.1549 (3) | 0.13253 (16) | 0.0436 (5) | |
| N2 | 0.8590 (2) | 0.2974 (3) | −0.00345 (19) | 0.0400 (6) | |
| H2N | 0.8503 | 0.3882 | −0.0390 | 0.048* | |
| C14 | 0.7697 (3) | 0.1737 (4) | −0.0342 (2) | 0.0351 (6) | |
| C15 | 0.6526 (3) | 0.2227 (4) | −0.0670 (2) | 0.0412 (7) | |
| C16 | 0.5648 (3) | 0.1028 (4) | −0.0983 (2) | 0.0422 (7) | |
| C17 | 0.5907 (3) | −0.0713 (5) | −0.0947 (3) | 0.0485 (8) | |
| H17 | 0.5314 | −0.1525 | −0.1133 | 0.058* | |
| C18 | 0.7064 (3) | −0.1199 (4) | −0.0630 (3) | 0.0471 (8) | |
| H18 | 0.7250 | −0.2351 | −0.0618 | 0.056* | |
| C19 | 0.7949 (3) | −0.0002 (4) | −0.0329 (2) | 0.0413 (7) | |
| H19 | 0.8723 | −0.0359 | −0.0115 | 0.050* | |
| C20 | 0.9589 (3) | 0.2819 (4) | 0.0796 (2) | 0.0347 (6) | |
| C21 | 1.0337 (3) | 0.4382 (4) | 0.1036 (2) | 0.0364 (6) | |
| C22 | 1.1550 (3) | 0.4300 (4) | 0.1294 (2) | 0.0432 (7) | |
| C23 | 1.2224 (3) | 0.5764 (6) | 0.1521 (3) | 0.0598 (9) | |
| H23 | 1.3026 | 0.5697 | 0.1680 | 0.072* | |
| C24 | 1.1699 (4) | 0.7327 (5) | 0.1510 (3) | 0.0635 (11) | |
| H24 | 1.2149 | 0.8316 | 0.1656 | 0.076* | |
| C25 | 1.0513 (4) | 0.7428 (5) | 0.1285 (3) | 0.0604 (10) | |
| H25 | 1.0168 | 0.8479 | 0.1297 | 0.072* | |
| C26 | 0.9839 (3) | 0.5976 (4) | 0.1043 (2) | 0.0464 (8) | |
| H26 | 0.9037 | 0.6060 | 0.0882 | 0.056* |
| Cl1 | 0.0515 (5) | 0.0378 (4) | 0.0674 (5) | 0.0092 (4) | 0.0148 (4) | −0.0055 (4) |
| Cl2 | 0.0619 (7) | 0.0521 (5) | 0.0969 (8) | −0.0162 (5) | 0.0164 (6) | −0.0149 (5) |
| Cl3 | 0.0614 (6) | 0.0395 (5) | 0.1037 (8) | 0.0091 (5) | 0.0080 (6) | 0.0133 (5) |
| O1 | 0.0443 (14) | 0.0479 (13) | 0.0663 (14) | 0.0016 (11) | 0.0173 (11) | −0.0199 (12) |
| N1 | 0.0360 (14) | 0.0392 (13) | 0.0486 (14) | 0.0038 (11) | 0.0162 (11) | −0.0078 (11) |
| C1 | 0.0353 (15) | 0.0343 (15) | 0.0375 (15) | 0.0061 (12) | 0.0127 (12) | −0.0007 (12) |
| C2 | 0.0448 (17) | 0.0418 (17) | 0.0389 (16) | 0.0093 (15) | 0.0149 (13) | −0.0026 (13) |
| C3 | 0.0467 (19) | 0.0471 (18) | 0.0511 (19) | −0.0055 (16) | 0.0147 (15) | −0.0106 (15) |
| C4 | 0.0379 (19) | 0.060 (2) | 0.064 (2) | −0.0022 (17) | 0.0095 (15) | −0.0069 (18) |
| C5 | 0.043 (2) | 0.053 (2) | 0.074 (3) | 0.0176 (17) | 0.0104 (17) | −0.0041 (18) |
| C6 | 0.050 (2) | 0.0376 (17) | 0.055 (2) | 0.0071 (15) | 0.0115 (15) | −0.0063 (15) |
| C7 | 0.0414 (17) | 0.0326 (15) | 0.0438 (16) | 0.0041 (13) | 0.0172 (13) | 0.0011 (13) |
| C8 | 0.0400 (17) | 0.0393 (16) | 0.0336 (14) | 0.0029 (13) | 0.0128 (12) | 0.0023 (12) |
| C9 | 0.0426 (19) | 0.0434 (18) | 0.0506 (18) | 0.0012 (15) | 0.0090 (14) | 0.0056 (14) |
| C10 | 0.044 (2) | 0.068 (2) | 0.064 (2) | 0.0131 (18) | 0.0096 (16) | 0.0015 (19) |
| C11 | 0.042 (2) | 0.073 (3) | 0.071 (2) | −0.007 (2) | 0.0159 (17) | 0.003 (2) |
| C12 | 0.054 (2) | 0.055 (2) | 0.065 (2) | −0.0116 (18) | 0.0231 (17) | 0.0018 (18) |
| C13 | 0.0457 (19) | 0.0384 (16) | 0.0527 (19) | −0.0038 (15) | 0.0185 (15) | 0.0002 (14) |
| Cl4 | 0.0492 (5) | 0.0352 (4) | 0.1229 (9) | 0.0110 (4) | 0.0283 (5) | 0.0141 (5) |
| Cl5 | 0.0330 (4) | 0.0743 (7) | 0.1059 (8) | 0.0019 (5) | 0.0126 (4) | 0.0079 (6) |
| Cl6 | 0.0455 (5) | 0.0593 (6) | 0.1157 (9) | 0.0121 (5) | 0.0322 (5) | −0.0116 (6) |
| O2 | 0.0459 (13) | 0.0357 (11) | 0.0453 (11) | 0.0033 (10) | 0.0119 (9) | 0.0058 (9) |
| N2 | 0.0359 (14) | 0.0321 (12) | 0.0449 (14) | 0.0007 (11) | 0.0065 (11) | 0.0086 (10) |
| C14 | 0.0328 (15) | 0.0351 (15) | 0.0367 (14) | −0.0006 (12) | 0.0119 (11) | 0.0055 (12) |
| C15 | 0.0423 (18) | 0.0341 (16) | 0.0485 (17) | 0.0067 (14) | 0.0184 (14) | 0.0075 (13) |
| C16 | 0.0329 (16) | 0.0432 (17) | 0.0510 (18) | −0.0021 (13) | 0.0161 (14) | 0.0028 (14) |
| C17 | 0.047 (2) | 0.0457 (18) | 0.0525 (19) | −0.0114 (16) | 0.0185 (15) | −0.0047 (15) |
| C18 | 0.054 (2) | 0.0301 (15) | 0.0572 (19) | 0.0024 (14) | 0.0201 (16) | −0.0038 (14) |
| C19 | 0.0352 (16) | 0.0394 (16) | 0.0454 (17) | 0.0053 (14) | 0.0101 (13) | 0.0010 (13) |
| C20 | 0.0359 (16) | 0.0339 (14) | 0.0383 (15) | 0.0072 (13) | 0.0184 (12) | 0.0006 (12) |
| C21 | 0.0363 (16) | 0.0335 (15) | 0.0374 (15) | 0.0019 (13) | 0.0111 (12) | −0.0031 (12) |
| C22 | 0.0395 (18) | 0.0407 (17) | 0.0472 (17) | 0.0038 (14) | 0.0133 (13) | −0.0028 (14) |
| C23 | 0.043 (2) | 0.067 (2) | 0.060 (2) | −0.0104 (19) | 0.0078 (16) | −0.0007 (19) |
| C24 | 0.077 (3) | 0.0399 (19) | 0.054 (2) | −0.0137 (19) | −0.0003 (19) | 0.0006 (15) |
| C25 | 0.074 (3) | 0.0357 (17) | 0.0509 (19) | 0.0061 (18) | −0.0013 (17) | −0.0010 (14) |
| C26 | 0.0487 (19) | 0.0397 (16) | 0.0413 (17) | 0.0060 (15) | 0.0052 (14) | 0.0001 (14) |
| Cl1—C2 | 1.728 (3) | Cl4—C15 | 1.735 (3) |
| Cl2—C3 | 1.730 (4) | Cl5—C16 | 1.735 (3) |
| Cl3—C9 | 1.739 (4) | Cl6—C22 | 1.733 (3) |
| O1—C7 | 1.226 (4) | O2—C20 | 1.222 (4) |
| N1—C7 | 1.353 (4) | N2—C20 | 1.371 (4) |
| N1—C1 | 1.411 (4) | N2—C14 | 1.409 (4) |
| N1—H1N | 0.8600 | N2—H2N | 0.8600 |
| C1—C6 | 1.391 (5) | C14—C19 | 1.395 (4) |
| C1—C2 | 1.401 (4) | C14—C15 | 1.396 (4) |
| C2—C3 | 1.397 (5) | C15—C16 | 1.377 (5) |
| C3—C4 | 1.373 (5) | C16—C17 | 1.397 (5) |
| C4—C5 | 1.384 (6) | C17—C18 | 1.380 (5) |
| C4—H4 | 0.9300 | C17—H17 | 0.9300 |
| C5—C6 | 1.384 (6) | C18—C19 | 1.381 (5) |
| C5—H5 | 0.9300 | C18—H18 | 0.9300 |
| C6—H6 | 0.9300 | C19—H19 | 0.9300 |
| C7—C8 | 1.507 (5) | C20—C21 | 1.493 (4) |
| C8—C13 | 1.390 (5) | C21—C26 | 1.393 (4) |
| C8—C9 | 1.402 (5) | C21—C22 | 1.402 (4) |
| C9—C10 | 1.392 (6) | C22—C23 | 1.382 (5) |
| C10—C11 | 1.371 (6) | C23—C24 | 1.382 (6) |
| C10—H10 | 0.9300 | C23—H23 | 0.9300 |
| C11—C12 | 1.370 (6) | C24—C25 | 1.376 (7) |
| C11—H11 | 0.9300 | C24—H24 | 0.9300 |
| C12—C13 | 1.392 (5) | C25—C26 | 1.375 (5) |
| C12—H12 | 0.9300 | C25—H25 | 0.9300 |
| C13—H13 | 0.9300 | C26—H26 | 0.9300 |
| C7—N1—C1 | 126.2 (3) | C20—N2—C14 | 124.1 (3) |
| C7—N1—H1N | 116.9 | C20—N2—H2N | 118.0 |
| C1—N1—H1N | 116.9 | C14—N2—H2N | 118.0 |
| C6—C1—C2 | 118.7 (3) | C19—C14—C15 | 118.0 (3) |
| C6—C1—N1 | 122.2 (3) | C19—C14—N2 | 121.5 (3) |
| C2—C1—N1 | 119.1 (3) | C15—C14—N2 | 120.5 (3) |
| C3—C2—C1 | 120.2 (3) | C16—C15—C14 | 120.8 (3) |
| C3—C2—Cl1 | 119.9 (3) | C16—C15—Cl4 | 120.1 (3) |
| C1—C2—Cl1 | 119.9 (3) | C14—C15—Cl4 | 119.0 (3) |
| C4—C3—C2 | 120.3 (3) | C15—C16—C17 | 120.8 (3) |
| C4—C3—Cl2 | 119.1 (3) | C15—C16—Cl5 | 121.3 (3) |
| C2—C3—Cl2 | 120.6 (3) | C17—C16—Cl5 | 117.9 (3) |
| C3—C4—C5 | 119.9 (3) | C18—C17—C16 | 118.4 (3) |
| C3—C4—H4 | 120.0 | C18—C17—H17 | 120.8 |
| C5—C4—H4 | 120.0 | C16—C17—H17 | 120.8 |
| C6—C5—C4 | 120.4 (4) | C17—C18—C19 | 121.1 (3) |
| C6—C5—H5 | 119.8 | C17—C18—H18 | 119.4 |
| C4—C5—H5 | 119.8 | C19—C18—H18 | 119.4 |
| C5—C6—C1 | 120.6 (4) | C18—C19—C14 | 120.8 (3) |
| C5—C6—H6 | 119.7 | C18—C19—H19 | 119.6 |
| C1—C6—H6 | 119.7 | C14—C19—H19 | 119.6 |
| O1—C7—N1 | 122.3 (3) | O2—C20—N2 | 123.1 (3) |
| O1—C7—C8 | 120.4 (3) | O2—C20—C21 | 122.6 (3) |
| N1—C7—C8 | 117.1 (3) | N2—C20—C21 | 114.2 (2) |
| C13—C8—C9 | 117.5 (3) | C26—C21—C22 | 117.9 (3) |
| C13—C8—C7 | 116.1 (3) | C26—C21—C20 | 120.0 (3) |
| C9—C8—C7 | 126.4 (3) | C22—C21—C20 | 122.0 (3) |
| C10—C9—C8 | 121.0 (3) | C23—C22—C21 | 120.9 (3) |
| C10—C9—Cl3 | 117.6 (3) | C23—C22—Cl6 | 118.0 (3) |
| C8—C9—Cl3 | 121.3 (3) | C21—C22—Cl6 | 121.1 (3) |
| C11—C10—C9 | 119.8 (4) | C22—C23—C24 | 119.7 (4) |
| C11—C10—H10 | 120.1 | C22—C23—H23 | 120.2 |
| C9—C10—H10 | 120.1 | C24—C23—H23 | 120.2 |
| C12—C11—C10 | 120.7 (4) | C25—C24—C23 | 120.3 (4) |
| C12—C11—H11 | 119.6 | C25—C24—H24 | 119.9 |
| C10—C11—H11 | 119.6 | C23—C24—H24 | 119.9 |
| C11—C12—C13 | 119.7 (4) | C26—C25—C24 | 120.1 (4) |
| C11—C12—H12 | 120.1 | C26—C25—H25 | 119.9 |
| C13—C12—H12 | 120.1 | C24—C25—H25 | 119.9 |
| C8—C13—C12 | 121.3 (3) | C25—C26—C21 | 121.1 (3) |
| C8—C13—H13 | 119.4 | C25—C26—H26 | 119.5 |
| C12—C13—H13 | 119.4 | C21—C26—H26 | 119.5 |
| C7—N1—C1—C6 | 36.2 (5) | C20—N2—C14—C19 | −43.2 (4) |
| C7—N1—C1—C2 | −145.3 (3) | C20—N2—C14—C15 | 136.7 (3) |
| C6—C1—C2—C3 | −0.5 (5) | C19—C14—C15—C16 | −0.8 (4) |
| N1—C1—C2—C3 | −179.1 (3) | N2—C14—C15—C16 | 179.2 (3) |
| C6—C1—C2—Cl1 | 179.5 (3) | C19—C14—C15—Cl4 | 179.2 (2) |
| N1—C1—C2—Cl1 | 0.8 (4) | N2—C14—C15—Cl4 | −0.7 (4) |
| C1—C2—C3—C4 | −0.6 (5) | C14—C15—C16—C17 | 2.3 (5) |
| Cl1—C2—C3—C4 | 179.5 (3) | Cl4—C15—C16—C17 | −177.8 (3) |
| C1—C2—C3—Cl2 | −179.4 (3) | C14—C15—C16—Cl5 | −178.9 (2) |
| Cl1—C2—C3—Cl2 | 0.7 (4) | Cl4—C15—C16—Cl5 | 1.1 (4) |
| C2—C3—C4—C5 | 1.0 (6) | C15—C16—C17—C18 | −2.6 (5) |
| Cl2—C3—C4—C5 | 179.9 (3) | Cl5—C16—C17—C18 | 178.5 (3) |
| C3—C4—C5—C6 | −0.5 (6) | C16—C17—C18—C19 | 1.6 (5) |
| C4—C5—C6—C1 | −0.6 (6) | C17—C18—C19—C14 | −0.3 (5) |
| C2—C1—C6—C5 | 1.0 (5) | C15—C14—C19—C18 | −0.1 (5) |
| N1—C1—C6—C5 | 179.6 (3) | N2—C14—C19—C18 | 179.8 (3) |
| C1—N1—C7—O1 | 0.1 (5) | C14—N2—C20—O2 | 3.4 (5) |
| C1—N1—C7—C8 | −175.7 (3) | C14—N2—C20—C21 | −173.0 (3) |
| O1—C7—C8—C13 | −39.9 (4) | O2—C20—C21—C26 | −128.9 (3) |
| N1—C7—C8—C13 | 135.9 (3) | N2—C20—C21—C26 | 47.5 (4) |
| O1—C7—C8—C9 | 140.8 (3) | O2—C20—C21—C22 | 48.7 (4) |
| N1—C7—C8—C9 | −43.4 (4) | N2—C20—C21—C22 | −134.9 (3) |
| C13—C8—C9—C10 | −1.1 (5) | C26—C21—C22—C23 | −1.8 (5) |
| C7—C8—C9—C10 | 178.2 (3) | C20—C21—C22—C23 | −179.4 (3) |
| C13—C8—C9—Cl3 | 175.0 (2) | C26—C21—C22—Cl6 | 178.6 (2) |
| C7—C8—C9—Cl3 | −5.7 (5) | C20—C21—C22—Cl6 | 1.0 (4) |
| C8—C9—C10—C11 | 0.3 (6) | C21—C22—C23—C24 | 1.1 (5) |
| Cl3—C9—C10—C11 | −175.8 (3) | Cl6—C22—C23—C24 | −179.3 (3) |
| C9—C10—C11—C12 | 0.4 (6) | C22—C23—C24—C25 | 0.6 (6) |
| C10—C11—C12—C13 | −0.3 (6) | C23—C24—C25—C26 | −1.7 (6) |
| C9—C8—C13—C12 | 1.2 (5) | C24—C25—C26—C21 | 1.0 (6) |
| C7—C8—C13—C12 | −178.2 (3) | C22—C21—C26—C25 | 0.7 (5) |
| C11—C12—C13—C8 | −0.5 (6) | C20—C21—C26—C25 | 178.4 (3) |
| H··· | ||||
| N1—H1N···O2 | 0.86 | 2.16 | 2.850 (3) | 137 |
| N1—H1N···Cl3 | 0.86 | 2.64 | 3.114 (3) | 116 |
| N2—H2N···O1i | 0.86 | 2.05 | 2.896 (3) | 167 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.16 | 2.850 (3) | 137 |
| N1—H1 | 0.86 | 2.64 | 3.114 (3) | 116 |
| N2—H2 | 0.86 | 2.05 | 2.896 (3) | 167 |
Symmetry code: (i) .