Literature DB >> 21202946

Cucurbit[6]uril p-xylylenediammonium diiodide deca-hydrate inclusion complex.

Wei-Hao Huang1, Peter Y Zavalij, Lyle Isaacs.   

Abstract

The title inclusion complex, C(36)H(36)N(24)O(12)·C(8)H(14)N(2) (2+)·2I(-)·10H(2)O, displays a large ellipsoidal deformation of the cucurbit[6]uril (CB[6]) skeleton upon complex formation. The benzene ring of the cation is rotationally disordered between two orientations in a ratio of 3:1. The solvent H(2)O mol-ecules form a hydrogen-bonded network by inter-action with the carbonyl groups of CB[6] and the I(-) counterions. The crystal studied exhibited non-merohedral twinning. Both CB[6] and the cation are centrosymmetric.

Entities:  

Year:  2008        PMID: 21202946      PMCID: PMC2961735          DOI: 10.1107/S1600536808018412

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Bush et al. (2005 ▶); Freeman et al. (1981 ▶); Freeman (1984 ▶); Henning et al. (2007 ▶); Huang et al. (2007 ▶); Ko et al. (2007 ▶); Lagona et al. (2005 ▶); Liu et al. (2005 ▶); Marquez et al. (2004 ▶); Moon & Kaifer (2004 ▶); Rauwald & Scherman (2008 ▶); Rekharsky et al. (2008 ▶); Samsonenko et al. (2002 ▶); Wheate et al. (2006 ▶).

Experimental

Crystal data

C36H36N24O12·C8H14N2 2+·2I−·10H2O M = 1569.06 Monoclinic, a = 11.9987 (9) Å b = 15.9520 (12) Å c = 15.0517 (11) Å β = 92.8520 (10)° V = 2877.4 (4) Å3 Z = 2 Mo Kα radiation μ = 1.20 mm−1 T = 220 (2) K 0.20 × 0.10 × 0.07 mm

Data collection

Bruker SMART 1000 three-circle diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.798, T max = 0.914 19804 measured reflections 6606 independent reflections 5363 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.083 S = 1.00 6606 reflections 475 parameters 33 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.68 e Å−3 Δρmin = −0.83 e Å−3 Data collection: SMART (Bruker, 1999 ▶); cell refinement: SAINT (Bruker, 1999 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808018412/cv2420sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808018412/cv2420Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C36H36N24O12·C8H14N22+·2I·10H2OF000 = 1596
Mr = 1569.06Dx = 1.811 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 6752 reflections
a = 11.9987 (9) Åθ = 2.1–25.0º
b = 15.9520 (12) ŵ = 1.20 mm1
c = 15.0517 (11) ÅT = 220 (2) K
β = 92.8520 (10)ºPrism, colourless
V = 2877.4 (4) Å30.21 × 0.10 × 0.08 mm
Z = 2
Bruker SMART1000 three-circle diffractometer6606 independent reflections
Radiation source: fine-focus sealed tube5363 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.027
Detector resolution: 8.33 pixels mm-1θmax = 25.0º
T = 220(2) Kθmin = 2.6º
ω scansh = −14→14
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)k = 0→18
Tmin = 0.798, Tmax = 0.914l = 0→17
19804 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.083  w = 1/[σ2(Fo2) + (0.01P)2 + 9.45P], P = (max(Fo2,0) + 2Fc2)/3
S = 1.00(Δ/σ)max = 0.001
6606 reflectionsΔρmax = 1.68 e Å3
475 parametersΔρmin = −0.83 e Å3
33 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.The crystal is non-merohedral twin in about 7:1 ratio with 180° rotation around 100 reciprocal axis.
xyzUiso*/UeqOcc. (<1)
N10.7930 (3)0.5633 (2)0.5760 (2)0.0507 (10)
H1A0.76030.59530.61660.076*
H1B0.86180.58320.56730.076*
H1C0.79790.51010.59580.076*
C10.7258 (3)0.5656 (3)0.4919 (3)0.0443 (10)
H1D0.76410.53310.44730.053*
H1E0.72100.62370.47100.053*
C20.6097 (3)0.5316 (2)0.4984 (3)0.0338 (8)0.75 (2)
C30.5731 (6)0.4915 (8)0.5724 (4)0.042 (2)0.75 (2)
H30.62130.48620.62320.050*0.75 (2)
C40.4658 (7)0.4587 (8)0.5731 (4)0.042 (2)0.75 (2)
H40.44400.42930.62350.051*0.75 (2)
C2A0.6097 (3)0.5316 (2)0.4984 (3)0.0338 (8)0.25 (2)
C3A0.5490 (14)0.538 (3)0.5730 (11)0.048 (7)0.25 (2)
H3A0.58170.56230.62480.058*0.25 (2)
C4A0.4395 (15)0.509 (3)0.5729 (14)0.055 (8)0.25 (2)
H4A0.39830.51750.62360.065*0.25 (2)
N100.3002 (3)0.7278 (2)0.4134 (2)0.0404 (8)
C110.3824 (3)0.7816 (3)0.3748 (3)0.0419 (10)
H110.35610.84020.36940.050*
N120.4926 (3)0.7764 (2)0.4189 (3)0.0514 (10)
C130.2665 (3)0.6641 (3)0.3575 (3)0.0378 (9)
O130.1943 (2)0.61228 (18)0.3720 (2)0.0477 (7)
C140.5705 (4)0.7472 (3)0.3620 (3)0.0492 (11)
O140.6714 (2)0.7448 (2)0.3790 (2)0.0597 (9)
N150.3242 (3)0.6691 (2)0.2818 (2)0.0410 (8)
C160.3977 (3)0.7412 (3)0.2827 (3)0.0417 (10)
H160.37760.78040.23350.050*
N170.5157 (3)0.7200 (2)0.2855 (2)0.0443 (9)
C180.3017 (3)0.6167 (3)0.2047 (3)0.0424 (10)
H18A0.30350.65150.15100.051*
H18B0.22640.59340.20720.051*
C190.5726 (4)0.6914 (3)0.2075 (3)0.0525 (12)
H19A0.65040.71010.21340.063*
H19B0.53810.71890.15490.063*
N200.3804 (2)0.5487 (2)0.1978 (2)0.0369 (8)
C210.4813 (3)0.5542 (2)0.1478 (3)0.0382 (9)
H210.46510.57400.08620.046*
N220.5717 (3)0.6010 (2)0.1919 (2)0.0421 (8)
C230.3496 (3)0.4674 (3)0.2112 (3)0.0393 (10)
O230.2621 (2)0.44348 (18)0.2413 (2)0.0458 (7)
C240.6548 (3)0.5501 (3)0.2251 (3)0.0414 (10)
O240.7409 (2)0.57396 (19)0.2638 (2)0.0554 (8)
N250.4334 (3)0.4166 (2)0.1863 (2)0.0410 (8)
C260.5247 (3)0.4628 (3)0.1501 (3)0.0395 (10)
H260.54250.44240.09030.047*
N270.6246 (3)0.4686 (2)0.2104 (2)0.0414 (8)
C280.4310 (3)0.3270 (3)0.1997 (3)0.0471 (11)
H28A0.46550.29990.14940.056*
H28B0.35300.30880.19880.056*
C290.7032 (3)0.3999 (3)0.2238 (3)0.0474 (11)
H29A0.70300.36630.16930.057*
H29B0.77830.42320.23410.057*
N300.4870 (3)0.2973 (2)0.2816 (2)0.0429 (9)
C310.6038 (3)0.2749 (3)0.2874 (3)0.0438 (10)
H310.62360.23810.23760.053*
N320.6791 (3)0.3455 (2)0.2977 (2)0.0453 (9)
C330.4323 (3)0.2741 (3)0.3553 (3)0.0439 (10)
O330.3330 (2)0.28222 (19)0.3662 (2)0.0543 (8)
C340.7397 (3)0.3437 (3)0.3768 (3)0.0417 (10)
O340.8151 (2)0.39229 (19)0.4000 (2)0.0512 (8)
N350.5085 (3)0.2381 (2)0.4152 (3)0.0455 (9)
C360.6176 (3)0.2293 (3)0.3780 (3)0.0435 (10)
H360.63830.16980.37080.052*
N370.7055 (3)0.2765 (2)0.4248 (2)0.0437 (9)
C380.4791 (4)0.1889 (3)0.4935 (4)0.0598 (13)
H38A0.39840.17910.48920.072*
H38B0.51540.13400.48990.072*
C390.7588 (3)0.2502 (3)0.5088 (3)0.0442 (10)
H39A0.76800.18910.50760.053*
H39B0.83350.27510.51420.053*
I10.78087 (2)0.50257 (2)0.010322 (19)0.05174 (9)
O1W0.9837 (3)0.6263 (3)0.4947 (3)0.0760 (11)
H11W1.035 (3)0.593 (3)0.512 (3)0.114*
H12W0.978 (5)0.619 (4)0.4385 (14)0.114*
O2W0.9547 (3)0.6070 (3)0.3199 (3)0.0937 (14)
H21W0.994 (4)0.571 (3)0.291 (4)0.141*
H22W0.891 (3)0.584 (4)0.310 (5)0.141*
O3W1.0139 (4)0.3995 (3)0.3046 (3)0.0880 (12)
H31W1.019 (6)0.427 (3)0.255 (2)0.132*
H32W0.969 (4)0.433 (3)0.334 (4)0.132*
O4W0.8962 (3)0.7906 (3)0.4916 (3)0.0839 (11)
H41W0.8269 (16)0.790 (4)0.486 (5)0.126*
H42W0.914 (5)0.746 (3)0.467 (4)0.126*
O5W1.0206 (3)0.5122 (4)0.1607 (3)0.0947 (14)
H51W1.073 (3)0.507 (5)0.129 (4)0.142*
H52W0.965 (3)0.495 (5)0.133 (4)0.142*
U11U22U33U12U13U23
N10.0256 (18)0.070 (3)0.056 (2)−0.0157 (17)−0.0027 (16)0.012 (2)
C10.031 (2)0.054 (2)0.048 (3)−0.0075 (19)0.0007 (18)0.005 (2)
C20.0290 (19)0.038 (2)0.034 (2)−0.0021 (15)0.0010 (16)0.0013 (17)
C30.032 (3)0.056 (6)0.037 (3)−0.004 (3)−0.008 (2)0.006 (3)
C40.036 (4)0.054 (6)0.037 (4)−0.007 (4)0.005 (3)0.010 (3)
C2A0.0290 (19)0.038 (2)0.034 (2)−0.0021 (15)0.0010 (16)0.0013 (17)
C3A0.041 (9)0.06 (2)0.043 (11)0.002 (11)0.005 (7)−0.008 (11)
C4A0.042 (9)0.07 (2)0.048 (12)0.008 (11)0.021 (8)−0.007 (13)
N100.0284 (18)0.048 (2)0.045 (2)−0.0041 (15)0.0042 (15)−0.0011 (17)
C110.029 (2)0.042 (2)0.054 (3)−0.0006 (18)0.0004 (18)0.000 (2)
N120.0265 (19)0.064 (3)0.063 (3)−0.0022 (17)−0.0015 (17)−0.022 (2)
C130.024 (2)0.043 (2)0.045 (3)0.0019 (18)−0.0013 (17)0.002 (2)
O130.0295 (15)0.0550 (19)0.059 (2)−0.0099 (14)0.0055 (13)0.0007 (15)
C140.031 (2)0.046 (3)0.072 (3)−0.005 (2)0.009 (2)−0.004 (2)
O140.0255 (17)0.066 (2)0.088 (3)−0.0058 (14)0.0051 (15)−0.0152 (18)
N150.0326 (19)0.046 (2)0.045 (2)−0.0062 (15)0.0072 (15)−0.0025 (17)
C160.029 (2)0.043 (2)0.052 (3)0.0002 (18)0.0034 (18)0.004 (2)
N170.0298 (19)0.054 (2)0.049 (2)−0.0009 (16)0.0088 (16)−0.0014 (18)
C180.030 (2)0.049 (3)0.048 (3)0.0032 (18)−0.0029 (18)0.001 (2)
C190.037 (2)0.059 (3)0.062 (3)−0.010 (2)0.010 (2)0.005 (2)
N200.0228 (17)0.041 (2)0.046 (2)0.0025 (14)−0.0010 (14)0.0019 (16)
C210.033 (2)0.045 (2)0.037 (2)−0.0002 (18)−0.0022 (18)0.0046 (19)
N220.0252 (18)0.044 (2)0.057 (2)−0.0023 (15)0.0012 (15)−0.0032 (17)
C230.026 (2)0.049 (2)0.042 (2)0.0013 (18)−0.0089 (18)0.0041 (19)
O230.0231 (15)0.0559 (18)0.0581 (19)−0.0046 (13)0.0003 (13)0.0063 (15)
C240.029 (2)0.052 (3)0.044 (3)−0.0023 (19)0.0068 (19)−0.006 (2)
O240.0262 (16)0.066 (2)0.073 (2)−0.0050 (14)−0.0053 (14)−0.0117 (17)
N250.0227 (17)0.040 (2)0.059 (2)−0.0004 (14)−0.0019 (15)0.0022 (17)
C260.030 (2)0.049 (2)0.040 (2)0.0006 (18)−0.0002 (18)−0.0031 (19)
N270.0227 (17)0.051 (2)0.051 (2)0.0043 (15)−0.0018 (15)0.0001 (17)
C280.029 (2)0.054 (3)0.057 (3)−0.0015 (19)−0.0060 (19)−0.004 (2)
C290.033 (2)0.058 (3)0.050 (3)0.002 (2)−0.0011 (19)0.004 (2)
N300.0276 (18)0.046 (2)0.054 (2)0.0014 (15)−0.0057 (16)0.0062 (18)
C310.031 (2)0.050 (3)0.050 (3)0.0072 (19)−0.0032 (18)0.002 (2)
N320.0306 (19)0.054 (2)0.050 (2)−0.0072 (16)−0.0067 (16)0.0113 (18)
C330.028 (2)0.037 (2)0.066 (3)−0.0050 (18)−0.003 (2)−0.007 (2)
O330.0269 (17)0.0540 (19)0.082 (2)−0.0067 (14)0.0009 (15)−0.0034 (17)
C340.029 (2)0.048 (3)0.048 (3)0.0038 (19)0.0001 (19)0.006 (2)
O340.0310 (16)0.061 (2)0.061 (2)−0.0100 (14)−0.0080 (14)0.0086 (16)
N350.0333 (19)0.051 (2)0.053 (2)−0.0046 (16)0.0019 (17)0.0059 (18)
C360.033 (2)0.047 (3)0.051 (3)0.0008 (19)−0.0011 (19)0.000 (2)
N370.0318 (18)0.053 (2)0.045 (2)−0.0039 (16)−0.0063 (15)0.0077 (17)
C380.039 (3)0.056 (3)0.084 (4)−0.005 (2)0.002 (3)−0.003 (3)
C390.033 (2)0.051 (3)0.048 (3)0.0045 (18)−0.0021 (19)0.004 (2)
I10.05282 (17)0.05554 (18)0.04705 (16)−0.01189 (15)0.00454 (12)0.00013 (16)
O1W0.0357 (19)0.103 (3)0.089 (3)−0.0053 (18)0.0004 (19)0.021 (3)
O2W0.041 (2)0.119 (4)0.119 (4)−0.004 (2)−0.005 (2)−0.004 (3)
O3W0.074 (3)0.091 (3)0.099 (3)0.006 (2)0.010 (2)0.002 (2)
O4W0.071 (2)0.082 (3)0.100 (3)−0.002 (2)0.005 (2)−0.008 (2)
O5W0.050 (2)0.168 (4)0.066 (2)0.003 (3)0.0075 (18)0.000 (3)
N1—C11.467 (5)C23—N251.359 (5)
N1—H1A0.9000C24—O241.222 (5)
N1—H1B0.9000C24—N271.364 (5)
N1—H1C0.9000N25—C281.445 (5)
C1—C21.503 (5)N25—C261.449 (5)
C1—H1D0.9800C26—N271.470 (5)
C1—H1E0.9800C26—H260.9900
C2—C31.375 (6)N27—C291.453 (5)
C2—C4i1.380 (8)C28—N301.453 (5)
C3—C41.391 (7)C28—H28A0.9800
C3—H30.9400C28—H28B0.9800
C4—C2i1.380 (8)C29—N321.452 (5)
C4—H40.9400C29—H29A0.9800
C3A—C4A1.393 (11)C29—H29B0.9800
C3A—H3A0.9400N30—C331.368 (5)
C4A—C2Ai1.36 (2)N30—C311.444 (5)
C4A—H4A0.9400C31—N321.447 (5)
N10—C131.368 (5)C31—C361.547 (6)
N10—C39i1.441 (5)C31—H310.9900
N10—C111.451 (5)N32—C341.364 (5)
C11—N121.452 (5)C33—O331.218 (5)
C11—C161.549 (6)C33—N351.377 (5)
C11—H110.9900C34—O341.228 (5)
N12—C141.379 (5)C34—N371.367 (5)
N12—C38i1.455 (6)N35—C361.455 (5)
C13—O131.225 (4)N35—C381.474 (6)
C13—N151.365 (5)C36—N371.449 (5)
C14—O141.225 (5)C36—H360.9900
C14—N171.367 (6)N37—C391.450 (5)
N15—C181.445 (5)C38—N12i1.455 (6)
N15—C161.449 (5)C38—H38A0.9800
C16—N171.453 (5)C38—H38B0.9800
C16—H160.9900C39—N10i1.441 (5)
N17—C191.460 (5)C39—H39A0.9800
C18—N201.446 (5)C39—H39B0.9800
C18—H18A0.9800I1—H52W2.80 (4)
C18—H18B0.9800O1W—H11W0.843 (19)
C19—N221.461 (5)O1W—H12W0.852 (19)
C19—H19A0.9800O2W—H21W0.870 (18)
C19—H19B0.9800O2W—H22W0.85 (2)
N20—C231.366 (5)O3W—H31W0.870 (18)
N20—C211.460 (5)O3W—H32W0.892 (19)
C21—N221.450 (5)O4W—H41W0.831 (19)
C21—C261.547 (5)O4W—H42W0.835 (19)
C21—H210.9900O5W—H51W0.82 (2)
N22—C241.361 (5)O5W—H52W0.824 (19)
C23—O231.225 (5)
C1—N1—H1A109.5C24—O24—H22W164.0 (18)
C1—N1—H1B109.5C23—N25—C28122.1 (3)
H1A—N1—H1B109.5C23—N25—C26112.6 (3)
C1—N1—H1C109.5C28—N25—C26125.2 (3)
H1A—N1—H1C109.5N25—C26—N27114.1 (3)
H1B—N1—H1C109.5N25—C26—C21103.2 (3)
N1—C1—C2113.9 (3)N27—C26—C21102.6 (3)
N1—C1—H1D108.8N25—C26—H26112.1
C2—C1—H1D108.8N27—C26—H26112.1
N1—C1—H1E108.8C21—C26—H26112.1
C2—C1—H1E108.8C24—N27—C29122.1 (3)
H1D—C1—H1E107.7C24—N27—C26111.1 (3)
C3—C2—C4i117.4 (4)C29—N27—C26122.8 (3)
C3—C2—C1123.7 (4)N25—C28—N30115.4 (3)
C4i—C2—C1118.9 (4)N25—C28—H28A108.4
C2—C3—C4121.0 (5)N30—C28—H28A108.4
C2—C3—H3119.5N25—C28—H28B108.4
C4—C3—H3119.5N30—C28—H28B108.4
C2i—C4—C3121.6 (5)H28A—C28—H28B107.5
C2i—C4—H4119.2N32—C29—N27113.8 (3)
C3—C4—H4119.2N32—C29—H29A108.8
C4A—C3A—H3A119.6N27—C29—H29A108.8
C2Ai—C4A—C3A122.1 (13)N32—C29—H29B108.8
C2Ai—C4A—H4A119.0N27—C29—H29B108.8
C3A—C4A—H4A119.0H29A—C29—H29B107.7
C13—N10—C39i122.7 (3)C33—N30—C31112.8 (3)
C13—N10—C11112.2 (3)C33—N30—C28123.8 (3)
C39i—N10—C11123.5 (3)C31—N30—C28122.6 (4)
N10—C11—N12113.9 (3)N30—C31—N32114.3 (3)
N10—C11—C16103.1 (3)N30—C31—C36103.3 (3)
N12—C11—C16103.8 (3)N32—C31—C36103.4 (3)
N10—C11—H11111.8N30—C31—H31111.7
N12—C11—H11111.8N32—C31—H31111.7
C16—C11—H11111.8C36—C31—H31111.7
C14—N12—C11111.5 (4)C34—N32—C31112.4 (3)
C14—N12—C38i123.8 (4)C34—N32—C29124.3 (4)
C11—N12—C38i123.9 (3)C31—N32—C29122.0 (3)
O13—C13—N15125.5 (4)O33—C33—N30126.4 (4)
O13—C13—N10125.5 (4)O33—C33—N35125.3 (4)
N15—C13—N10108.9 (3)N30—C33—N35108.3 (3)
O14—C14—N17126.5 (4)O34—C34—N32126.0 (4)
O14—C14—N12125.0 (4)O34—C34—N37125.5 (4)
N17—C14—N12108.5 (4)N32—C34—N37108.4 (4)
C14—O14—H41W145.2 (12)C34—O34—H32W132.1 (14)
C13—N15—C18123.7 (3)C33—N35—C36111.6 (4)
C13—N15—C16111.9 (3)C33—N35—C38124.6 (4)
C18—N15—C16123.7 (3)C36—N35—C38120.8 (3)
N15—C16—N17114.0 (3)N37—C36—N35114.2 (4)
N15—C16—C11103.8 (3)N37—C36—C31103.2 (3)
N17—C16—C11103.2 (3)N35—C36—C31103.6 (3)
N15—C16—H16111.7N37—C36—H36111.8
N17—C16—H16111.7N35—C36—H36111.8
C11—C16—H16111.7C31—C36—H36111.8
C14—N17—C16112.2 (3)C34—N37—C36112.4 (3)
C14—N17—C19123.4 (4)C34—N37—C39123.8 (3)
C16—N17—C19122.8 (4)C36—N37—C39123.5 (3)
N15—C18—N20113.2 (3)N12i—C38—N35117.8 (4)
N15—C18—H18A108.9N12i—C38—H38A107.8
N20—C18—H18A108.9N35—C38—H38A107.8
N15—C18—H18B108.9N12i—C38—H38B107.8
N20—C18—H18B108.9N35—C38—H38B107.8
H18A—C18—H18B107.7H38A—C38—H38B107.2
N17—C19—N22116.0 (4)N10i—C39—N37115.1 (3)
N17—C19—H19A108.3N10i—C39—H39A108.5
N22—C19—H19A108.3N37—C39—H39A108.5
N17—C19—H19B108.3N10i—C39—H39B108.5
N22—C19—H19B108.3N37—C39—H39B108.5
H19A—C19—H19B107.4H39A—C39—H39B107.5
C23—N20—C18121.3 (3)H1B—O1W—H42W97.1
C23—N20—C21111.8 (3)H1B—O1W—H11W99.4
C18—N20—C21123.6 (3)H42W—O1W—H11W154 (4)
N22—C21—N20114.5 (3)H1B—O1W—H12W118.7
N22—C21—C26103.4 (3)H42W—O1W—H12W85 (4)
N20—C21—C26102.6 (3)H11W—O1W—H12W104 (3)
N22—C21—H21111.9H12W—O2W—H21W120 (4)
N20—C21—H21111.9H12W—O2W—H22W109 (5)
C26—C21—H21111.9H21W—O2W—H22W97 (3)
C24—N22—C21112.2 (3)H31W—O3W—H32W101 (3)
C24—N22—C19122.1 (4)H41W—O4W—H42W103 (4)
C21—N22—C19125.5 (3)H31W—O5W—H21W69.1 (15)
O23—C23—N25125.2 (4)H31W—O5W—H51W113 (6)
O23—C23—N20126.4 (4)H21W—O5W—H51W136 (5)
N25—C23—N20108.4 (3)H31W—O5W—H52W96 (6)
O24—C24—N22125.1 (4)H21W—O5W—H52W116 (5)
O24—C24—N27125.8 (4)H51W—O5W—H52W107 (4)
N22—C24—N27109.0 (3)
N1—C1—C2—C3−8.4 (9)O23—C23—N25—C26177.8 (4)
N1—C1—C2—C4i171.1 (7)N20—C23—N25—C26−2.8 (5)
C4i—C2—C3—C42.9 (10)C23—N25—C26—N27105.7 (4)
C1—C2—C3—C4−177.6 (5)C28—N25—C26—N27−71.4 (5)
C2—C3—C4—C2i−3.0 (10)C23—N25—C26—C21−4.8 (4)
C13—N10—C11—N12−112.2 (4)C28—N25—C26—C21178.1 (4)
C39i—N10—C11—N1281.8 (5)N22—C21—C26—N25129.2 (3)
C13—N10—C11—C16−0.4 (4)N20—C21—C26—N259.8 (4)
C39i—N10—C11—C16−166.4 (3)N22—C21—C26—N2710.4 (4)
N10—C11—N12—C14117.8 (4)N20—C21—C26—N27−108.9 (3)
C16—C11—N12—C146.4 (5)O24—C24—N27—C29−13.1 (7)
N10—C11—N12—C38i−72.2 (5)N22—C24—N27—C29168.9 (3)
C16—C11—N12—C38i176.4 (4)O24—C24—N27—C26−171.2 (4)
C39i—N10—C13—O13−10.4 (6)N22—C24—N27—C2610.7 (5)
C11—N10—C13—O13−176.5 (4)N25—C26—N27—C24−124.0 (4)
C39i—N10—C13—N15168.0 (3)C21—C26—N27—C24−13.2 (4)
C11—N10—C13—N151.9 (4)N25—C26—N27—C2978.1 (5)
C11—N12—C14—O14172.2 (4)C21—C26—N27—C29−171.1 (3)
C38i—N12—C14—O142.2 (7)C23—N25—C28—N30−93.7 (5)
C11—N12—C14—N17−9.3 (5)C26—N25—C28—N3083.1 (5)
C38i—N12—C14—N17−179.3 (4)C24—N27—C29—N32112.2 (4)
O13—C13—N15—C184.8 (6)C26—N27—C29—N32−92.2 (5)
N10—C13—N15—C18−173.5 (3)N25—C28—N30—C33102.0 (5)
O13—C13—N15—C16175.6 (4)N25—C28—N30—C31−89.8 (5)
N10—C13—N15—C16−2.7 (5)C33—N30—C31—N32−109.9 (4)
C13—N15—C16—N17114.0 (4)C28—N30—C31—N3280.7 (5)
C18—N15—C16—N17−75.2 (5)C33—N30—C31—C361.7 (5)
C13—N15—C16—C112.4 (4)C28—N30—C31—C36−167.6 (4)
C18—N15—C16—C11173.2 (3)N30—C31—N32—C34116.4 (4)
N10—C11—C16—N15−1.1 (4)C36—C31—N32—C344.8 (5)
N12—C11—C16—N15117.9 (3)N30—C31—N32—C29−76.3 (5)
N10—C11—C16—N17−120.4 (3)C36—C31—N32—C29172.1 (3)
N12—C11—C16—N17−1.3 (4)N27—C29—N32—C34−107.2 (5)
O14—C14—N17—C16−173.1 (4)N27—C29—N32—C3187.1 (5)
N12—C14—N17—C168.4 (5)C31—N30—C33—O33−176.7 (4)
O14—C14—N17—C19−6.7 (7)C28—N30—C33—O33−7.5 (7)
N12—C14—N17—C19174.8 (4)C31—N30—C33—N352.1 (5)
N15—C16—N17—C14−116.1 (4)C28—N30—C33—N35171.3 (4)
C11—C16—N17—C14−4.2 (5)C31—N32—C34—O34174.4 (4)
N15—C16—N17—C1977.4 (5)C29—N32—C34—O347.5 (7)
C11—C16—N17—C19−170.7 (4)C31—N32—C34—N37−3.2 (5)
C13—N15—C18—N20−101.9 (4)C29—N32—C34—N37−170.2 (4)
C16—N15—C18—N2088.4 (5)O33—C33—N35—C36173.4 (4)
C14—N17—C19—N22106.0 (5)N30—C33—N35—C36−5.4 (5)
C16—N17—C19—N22−89.0 (5)O33—C33—N35—C3812.9 (7)
N15—C18—N20—C23109.8 (4)N30—C33—N35—C38−166.0 (4)
N15—C18—N20—C21−92.6 (4)C33—N35—C36—N37117.7 (4)
C23—N20—C21—N22−123.7 (4)C38—N35—C36—N37−80.9 (5)
C18—N20—C21—N2276.8 (5)C33—N35—C36—C316.2 (4)
C23—N20—C21—C26−12.4 (4)C38—N35—C36—C31167.6 (4)
C18—N20—C21—C26−171.9 (3)N30—C31—C36—N37−123.9 (3)
N20—C21—N22—C24105.8 (4)N32—C31—C36—N37−4.5 (4)
C26—C21—N22—C24−5.0 (4)N30—C31—C36—N35−4.6 (4)
N20—C21—N22—C19−69.0 (5)N32—C31—C36—N35114.9 (3)
C26—C21—N22—C19−179.8 (4)O34—C34—N37—C36−177.7 (4)
N17—C19—N22—C24−91.7 (5)N32—C34—N37—C36−0.1 (5)
N17—C19—N22—C2182.6 (5)O34—C34—N37—C39−3.8 (7)
C18—N20—C23—O23−10.6 (7)N32—C34—N37—C39173.8 (4)
C21—N20—C23—O23−170.6 (4)N35—C36—N37—C34−108.8 (4)
C18—N20—C23—N25170.0 (3)C31—C36—N37—C343.0 (4)
C21—N20—C23—N2510.0 (5)N35—C36—N37—C3977.3 (5)
C21—N22—C24—O24178.8 (4)C31—C36—N37—C39−171.0 (4)
C19—N22—C24—O24−6.3 (7)C33—N35—C38—N12i−113.2 (5)
C21—N22—C24—N27−3.2 (5)C36—N35—C38—N12i87.9 (5)
C19—N22—C24—N27171.8 (4)C34—N37—C39—N10i103.4 (4)
O23—C23—N25—C28−5.0 (6)C36—N37—C39—N10i−83.3 (5)
N20—C23—N25—C28174.4 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O23i0.902.252.861 (5)124
N1—H1A···O33i0.902.273.040 (5)143
N1—H1B···O1W0.901.992.833 (5)155
N1—H1B···O3Wii0.902.392.922 (6)118
N1—H1C···O13i0.902.012.910 (5)175
O1W—H11W···O34ii0.843 (19)2.19 (3)2.837 (4)133 (4)
O1W—H12W···O2W0.852 (19)1.80 (2)2.655 (6)175 (6)
O2W—H21W···O5W0.870 (18)2.21 (3)2.973 (6)146 (5)
O2W—H22W···O240.85 (2)1.91 (3)2.712 (5)157 (7)
O3W—H31W···O5W0.870 (18)1.97 (2)2.820 (7)167 (4)
O3W—H32W···O340.892 (19)2.23 (4)2.847 (5)126 (4)
O4W—H41W···O140.831 (19)2.51 (5)3.198 (5)141 (6)
O4W—H42W···O1W0.835 (19)2.11 (5)2.823 (6)143 (7)
O5W—H51W···I1iii0.82 (2)2.80 (3)3.601 (4)167 (6)
O5W—H52W···I10.824 (19)2.80 (4)3.573 (4)157 (7)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O23i0.902.252.861 (5)124
N1—H1A⋯O33i0.902.273.040 (5)143
N1—H1B⋯O1W0.901.992.833 (5)155
N1—H1B⋯O3Wii0.902.392.922 (6)118
N1—H1C⋯O13i0.902.012.910 (5)175
O1W—H11W⋯O34ii0.843 (19)2.19 (3)2.837 (4)133 (4)
O1W—H12W⋯O2W0.852 (19)1.80 (2)2.655 (6)175 (6)
O2W—H21W⋯O5W0.870 (18)2.21 (3)2.973 (6)146 (5)
O2W—H22W⋯O240.85 (2)1.91 (3)2.712 (5)157 (7)
O3W—H31W⋯O5W0.870 (18)1.97 (2)2.820 (7)167 (4)
O3W—H32W⋯O340.892 (19)2.23 (4)2.847 (5)126 (4)
O4W—H41W⋯O140.831 (19)2.51 (5)3.198 (5)141 (6)
O4W—H42W⋯O1W0.835 (19)2.11 (5)2.823 (6)143 (7)
O5W—H51W⋯I1iii0.82 (2)2.80 (3)3.601 (4)167 (6)
O5W—H52W⋯I10.824 (19)2.80 (4)3.573 (4)157 (7)

Symmetry codes: (i) ; (ii) ; (iii) .

  11 in total

1.  Cucurbit[n]uril binding of platinum anticancer complexes.

Authors:  Nial J Wheate; Damian P Buck; Anthony I Day; J Grant Collins
Journal:  Dalton Trans       Date:  2005-11-28       Impact factor: 4.390

Review 2.  The cucurbit[n]uril family.

Authors:  Jason Lagona; Pritam Mukhopadhyay; Sriparna Chakrabarti; Lyle Isaacs
Journal:  Angew Chem Int Ed Engl       Date:  2005-08-05       Impact factor: 15.336

3.  Label-free continuous enzyme assays with macrocycle-fluorescent dye complexes.

Authors:  Andreas Hennig; Hüseyin Bakirci; Werner M Nau
Journal:  Nat Methods       Date:  2007-07-01       Impact factor: 28.547

4.  The cucurbit[n]uril family: prime components for self-sorting systems.

Authors:  Simin Liu; Christian Ruspic; Pritam Mukhopadhyay; Sriparna Chakrabarti; Peter Y Zavalij; Lyle Isaacs
Journal:  J Am Chem Soc       Date:  2005-11-16       Impact factor: 15.419

5.  Supramolecular assemblies built with host-stabilized charge-transfer interactions.

Authors:  Young Ho Ko; Eunju Kim; Ilha Hwang; Kimoon Kim
Journal:  Chem Commun (Camb)       Date:  2006-12-12       Impact factor: 6.222

6.  Charge-mediated recognition of N-terminal tryptophan in aqueous solution by a synthetic host.

Authors:  Meghan E Bush; Nicole D Bouley; Adam R Urbach
Journal:  J Am Chem Soc       Date:  2005-10-19       Impact factor: 15.419

7.  Modes of binding interaction between viologen guests and the cucurbit[7]uril host.

Authors:  Kwangyul Moon; Angel E Kaifer
Journal:  Org Lett       Date:  2004-01-22       Impact factor: 6.005

8.  Supramolecular block copolymers with cucurbit[8]uril in water.

Authors:  Urs Rauwald; Oren A Scherman
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

9.  Mechanism of host-guest complexation by cucurbituril.

Authors:  César Márquez; Robert R Hudgins; Werner M Nau
Journal:  J Am Chem Soc       Date:  2004-05-12       Impact factor: 15.419

10.  Sequence recognition and self-sorting of a dipeptide by cucurbit[6]uril and cucurbit[7]uril.

Authors:  Mikhail V Rekharsky; Hatsuo Yamamura; Young Ho Ko; N Selvapalam; Kimoon Kim; Yoshihisa Inoue
Journal:  Chem Commun (Camb)       Date:  2008-03-10       Impact factor: 6.222

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  1 in total

1.  Molecular recognition of organic ammonium ions in solution using synthetic receptors.

Authors:  Andreas Späth; Burkhard König
Journal:  Beilstein J Org Chem       Date:  2010-04-06       Impact factor: 2.883

  1 in total

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