Literature DB >> 21202934

Semisynthetic roxburghin tetra-methyl ether.

Alex Saez, Carmen Ramirez de Arellano, Noureddine El Aouad, Silvia Rodriguez, Felipe Otalvaro, Diego Cortes, Jairo Saez.   

Abstract

The title mol-ecule, (E)-2,3',4,5-tetra-methoxy-stilbene, C(18)H(20)O(4), is virtually planar. The angle between the two benzene rings is 4.06 (6)°. The inter-molecular inter-actions present in the structure are weak. There are C-H⋯O hydrogen bonds and C-H⋯π-electron ring inter-actions. The mol-ecules are ordered into planes that are parallel to (01). The distance between adjacent planes is about 3.3 Å and therefore π-π electron inter-actions between the aromatic planes are also plausible.

Entities:  

Year:  2008        PMID: 21202934      PMCID: PMC2961722          DOI: 10.1107/S1600536808018266

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the importance and useful applications of stilbenoid compounds, see: Cushman et al. (1991 ▶); Nakamura et al. (2006 ▶). For the precursors of the title compound, see: Krishnamurty & Maheshwari (1988 ▶); Anjaneyulu et al. (1990 ▶); Wang et al. (1988 ▶); Murillo (2001 ▶).

Experimental

Crystal data

C18H20O4 M = 300.34 Triclinic, a = 7.9633 (4) Å b = 9.2454 (5) Å c = 11.6194 (5) Å α = 73.400 (2)° β = 75.479 (3)° γ = 70.335 (2)° V = 760.59 (7) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 150 (2) K 0.35 × 0.10 × 0.04 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: none 8260 measured reflections 4391 independent reflections 2785 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.136 S = 0.98 4391 reflections 203 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.23 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL/PC (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808018266/fb2091sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808018266/fb2091Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H20O4Z = 2
Mr = 300.34F000 = 320
Triclinic, P1Dx = 1.311 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 7.9633 (4) ÅCell parameters from 46078 reflections
b = 9.2454 (5) Åθ = 1.0–30.0º
c = 11.6194 (5) ŵ = 0.09 mm1
α = 73.400 (2)ºT = 150 (2) K
β = 75.479 (3)ºNeedle, yellow
γ = 70.335 (2)º0.35 × 0.10 × 0.04 mm
V = 760.59 (7) Å3
Nonius KappaCCD diffractometer4391 independent reflections
Radiation source: fine-focus sealed tube2785 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.025
Detector resolution: 9 pixels mm-1θmax = 30.0º
T = 150(2) Kθmin = 2.7º
ω scansh = −11→11
Absorption correction: nonek = −13→12
8260 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047H-atom parameters constrained
wR(F2) = 0.136  w = 1/[σ2(Fo2) + (0.0789P)2] where P = (Fo2 + 2Fc2)/3
S = 0.98(Δ/σ)max < 0.001
4391 reflectionsΔρmax = 0.29 e Å3
203 parametersΔρmin = −0.23 e Å3
76 constraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F^2^ against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F^2^, conventional R-factors R are based on F, with F set to zero for negative F^2^. The threshold expression of F^2^ > σ(F^2^) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F^2^ are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.35419 (11)0.13391 (9)0.41479 (8)0.0342 (2)
O20.16009 (11)0.25274 (9)0.59974 (7)0.0302 (2)
O30.31164 (11)0.74440 (9)0.41175 (7)0.0322 (2)
O40.83171 (12)1.06354 (9)−0.08834 (8)0.0352 (2)
C10.34968 (15)0.28542 (12)0.40914 (10)0.0257 (2)
C20.24495 (14)0.34919 (12)0.50941 (9)0.0242 (2)
C30.23241 (14)0.50121 (12)0.51169 (10)0.0252 (2)
H30.16200.54410.57960.030*
C40.32276 (14)0.59219 (12)0.41457 (10)0.0242 (2)
C50.42856 (14)0.53130 (12)0.31388 (10)0.0237 (2)
C60.43875 (15)0.37648 (12)0.31392 (10)0.0260 (2)
H60.50920.33300.24630.031*
C70.52275 (15)0.62808 (13)0.21313 (10)0.0255 (2)
H70.50080.73400.21760.031*
C80.63618 (15)0.58230 (13)0.11577 (10)0.0286 (2)
H80.65830.47620.11160.034*
C110.73066 (15)0.67918 (13)0.01411 (10)0.0266 (2)
C120.72987 (14)0.83038 (13)0.01567 (10)0.0257 (2)
H120.66610.87410.08440.031*
C130.82170 (15)0.91678 (13)−0.08266 (10)0.0275 (3)
C140.91383 (17)0.85479 (15)−0.18482 (11)0.0352 (3)
H140.97540.9144−0.25240.042*
C150.91459 (18)0.70674 (15)−0.18674 (11)0.0400 (3)
H150.97700.6642−0.25620.048*
C160.82497 (17)0.61818 (14)−0.08813 (11)0.0348 (3)
H160.82810.5154−0.09060.042*
C170.48206 (17)0.05869 (13)0.32371 (12)0.0372 (3)
H17A0.44830.11270.24350.056*
H17B0.4825−0.05160.34110.056*
H17C0.60300.06340.32410.056*
C180.06092 (16)0.31142 (13)0.70597 (10)0.0303 (3)
H18A0.14280.33480.74390.046*
H18B0.00740.23190.76400.046*
H18C−0.03530.40770.68280.046*
C190.19201 (16)0.81424 (13)0.50742 (11)0.0329 (3)
H19A0.06890.81240.50970.049*
H19B0.19390.92350.49300.049*
H19C0.23090.75500.58540.049*
C200.75180 (17)1.12894 (14)0.01691 (11)0.0349 (3)
H20A0.62081.14490.03260.052*
H20B0.77621.23020.00290.052*
H20C0.80361.05660.08750.052*
U11U22U33U12U13U23
O10.0446 (5)0.0235 (4)0.0337 (5)−0.0156 (3)0.0077 (4)−0.0104 (3)
O20.0344 (4)0.0262 (4)0.0267 (4)−0.0133 (3)0.0047 (3)−0.0040 (3)
O30.0395 (5)0.0247 (4)0.0317 (4)−0.0148 (3)0.0080 (4)−0.0108 (3)
O40.0432 (5)0.0296 (4)0.0328 (5)−0.0187 (4)0.0041 (4)−0.0064 (4)
C10.0290 (6)0.0202 (5)0.0279 (6)−0.0089 (4)−0.0023 (5)−0.0054 (4)
C20.0240 (5)0.0245 (5)0.0221 (5)−0.0092 (4)−0.0019 (4)−0.0015 (4)
C30.0251 (5)0.0255 (5)0.0243 (5)−0.0078 (4)−0.0008 (4)−0.0066 (4)
C40.0256 (5)0.0212 (5)0.0264 (6)−0.0083 (4)−0.0024 (4)−0.0062 (4)
C50.0231 (5)0.0239 (5)0.0242 (5)−0.0089 (4)−0.0024 (4)−0.0040 (4)
C60.0278 (6)0.0255 (5)0.0244 (5)−0.0095 (4)0.0002 (4)−0.0069 (4)
C70.0272 (6)0.0238 (5)0.0255 (6)−0.0097 (4)−0.0024 (5)−0.0045 (4)
C80.0339 (6)0.0233 (5)0.0279 (6)−0.0116 (4)0.0006 (5)−0.0056 (4)
C110.0261 (5)0.0276 (6)0.0244 (5)−0.0091 (4)−0.0007 (4)−0.0046 (4)
C120.0259 (5)0.0282 (5)0.0217 (5)−0.0089 (4)0.0002 (4)−0.0059 (4)
C130.0274 (6)0.0281 (6)0.0266 (6)−0.0105 (5)−0.0020 (5)−0.0048 (5)
C140.0397 (7)0.0398 (7)0.0259 (6)−0.0210 (6)0.0055 (5)−0.0051 (5)
C150.0488 (8)0.0436 (7)0.0278 (6)−0.0192 (6)0.0094 (6)−0.0149 (6)
C160.0434 (7)0.0302 (6)0.0309 (6)−0.0158 (5)0.0058 (5)−0.0112 (5)
C170.0439 (7)0.0279 (6)0.0381 (7)−0.0126 (5)0.0071 (6)−0.0141 (5)
C180.0343 (6)0.0345 (6)0.0211 (5)−0.0152 (5)0.0019 (5)−0.0038 (5)
C190.0353 (6)0.0276 (6)0.0358 (7)−0.0111 (5)0.0055 (5)−0.0142 (5)
C200.0374 (7)0.0310 (6)0.0373 (7)−0.0134 (5)0.0003 (5)−0.0104 (5)
O1—C11.3720 (12)C11—C121.4011 (15)
O1—C171.4298 (13)C12—C131.3896 (15)
O2—C21.3670 (13)C12—H120.9500
O2—C181.4308 (13)C13—C141.3945 (16)
O3—C41.3713 (12)C14—C151.3733 (16)
O3—C191.4231 (13)C14—H140.9500
O4—C131.3677 (13)C15—C161.3927 (17)
O4—C201.4281 (13)C15—H150.9500
C1—C61.3828 (15)C16—H160.9500
C1—C21.4052 (14)C17—H17A0.9800
C2—C31.3826 (14)C17—H17B0.9800
C3—C41.3988 (15)C17—H17C0.9800
C3—H30.9500C18—H18A0.9800
C4—C51.3994 (14)C18—H18B0.9800
C5—C61.4060 (14)C18—H18C0.9800
C5—C71.4651 (15)C19—H19A0.9800
C6—H60.9500C19—H19B0.9800
C7—C81.3336 (16)C19—H19C0.9800
C7—H70.9500C20—H20A0.9800
C8—C111.4721 (15)C20—H20B0.9800
C8—H80.9500C20—H20C0.9800
C11—C161.3942 (15)
C1—O1—C17116.35 (8)O4—C13—C14115.01 (9)
C2—O2—C18117.08 (8)C12—C13—C14120.36 (10)
C4—O3—C19117.81 (8)C15—C14—C13119.33 (10)
C13—O4—C20117.84 (8)C15—C14—H14120.3
O1—C1—C6125.08 (10)C13—C14—H14120.3
O1—C1—C2115.75 (9)C14—C15—C16120.85 (11)
C6—C1—C2119.18 (9)C14—C15—H15119.6
O2—C2—C3124.25 (10)C16—C15—H15119.6
O2—C2—C1115.93 (9)C15—C16—C11120.49 (10)
C3—C2—C1119.82 (9)C15—C16—H16119.8
C2—C3—C4120.40 (10)C11—C16—H16119.8
C2—C3—H3119.8O1—C17—H17A109.5
C4—C3—H3119.8O1—C17—H17B109.5
O3—C4—C3122.49 (9)H17A—C17—H17B109.5
O3—C4—C5116.58 (9)O1—C17—H17C109.5
C3—C4—C5120.93 (9)H17A—C17—H17C109.5
C4—C5—C6117.45 (9)H17B—C17—H17C109.5
C4—C5—C7120.20 (9)O2—C18—H18A109.5
C6—C5—C7122.35 (10)O2—C18—H18B109.5
C1—C6—C5122.22 (10)H18A—C18—H18B109.5
C1—C6—H6118.9O2—C18—H18C109.5
C5—C6—H6118.9H18A—C18—H18C109.5
C8—C7—C5126.52 (10)H18B—C18—H18C109.5
C8—C7—H7116.7O3—C19—H19A109.5
C5—C7—H7116.7O3—C19—H19B109.5
C7—C8—C11126.74 (10)H19A—C19—H19B109.5
C7—C8—H8116.6O3—C19—H19C109.5
C11—C8—H8116.6H19A—C19—H19C109.5
C16—C11—C12118.51 (10)H19B—C19—H19C109.5
C16—C11—C8118.73 (10)O4—C20—H20A109.5
C12—C11—C8122.76 (10)O4—C20—H20B109.5
C13—C12—C11120.45 (10)H20A—C20—H20B109.5
C13—C12—H12119.8O4—C20—H20C109.5
C11—C12—H12119.8H20A—C20—H20C109.5
O4—C13—C12124.63 (10)H20B—C20—H20C109.5
D—H···AD—HH···AD···AD—H···A
C7—H7···O30.952.392.7504 (14)102
C17—H17B···O3i0.982.523.4046 (16)150
C18—H18B···O4ii0.982.463.4342 (15)172
C19—H19B···O1iii0.982.513.4082 (15)152
C17—H17A···Cg2iv0.982.913.7863 (15)149
C18—H18C···Cg1v0.982.673.5578 (14)151
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C7—H7⋯O30.952.392.7504 (14)102
C17—H17B⋯O3i0.982.523.4046 (16)150
C18—H18B⋯O4ii0.982.463.4342 (15)172
C19—H19B⋯O1iii0.982.513.4082 (15)152
C17—H17ACg2iv0.982.913.7863 (15)149
C18—H18CCg1v0.982.673.5578 (14)151

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) . Cg1 is the centroid of the C1–C6 ring and Cg2 is the centroid of the C11–C16 ring.

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