| Literature DB >> 21202925 |
Andrea Johnston, Alastair J Florence, Francesca J A Fabbiani, Kenneth Shankland, Colin T Bedford.
Abstract
Cytenamide forms a 1:1 solvate with butyric acid [systematic name: 5H-dibenzo[a,d]cyclo-hepta-triene-5-carboxamide-butanoic acid (1/1)], C(16)H(13)NO·C(4)H(8)O(2). The title compound crystallizes with one mol-ecule of cytenamide and one of butyric acid in the asymmetric unit; these mol-ecules are linked by N-H⋯O and O-H⋯O hydrogen bonds to form an R(2) (2)(8) heterodimer motif. Pairs of adjacent motifs are further connected via N-H⋯O inter-actions to form a discrete centrosymmetric assembly.Entities:
Year: 2008 PMID: 21202925 PMCID: PMC2961685 DOI: 10.1107/S1600536808018059
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H13NO·C4H8O2 | |
| Monoclinic, | Melting point: 216.2 K |
| Hall symbol: -P 2yn | Mo |
| Cell parameters from 6486 reflections | |
| θ = 3–29º | |
| µ = 0.09 mm−1 | |
| β = 98.046 (2)º | |
| Block, colourless | |
| 0.35 × 0.15 × 0.12 mm |
| Oxford Diffraction Gemini diffractometer | 4069 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 2928 reflections with |
| Monochromator: graphite | |
| Detector resolution: 15.9745 pixels mm-1 | θmax = 28.7º |
| θmin = 2.6º | |
| ω scans | |
| Absorption correction: multi-scan(CrysAlis RED; Oxford Diffraction, 2007) | |
| 18979 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Hydrogen site location: geom+difmap |
| H atoms treated by a mixture of independent and constrained refinement | |
| Method = Modified Sheldrick
| |
| (Δ/σ)max = 0.001 | |
| 4069 reflections | Δρmax = 0.38 e Å−3 |
| 226 parameters | Δρmin = −0.27 e Å−3 |
| 3 restraints | Extinction correction: none |
| C1 | 0.3604 (2) | 0.32253 (7) | 0.41898 (7) | 0.0261 | |
| C2 | 0.1718 (2) | 0.36489 (8) | 0.38294 (7) | 0.0323 | |
| C3 | 0.1256 (2) | 0.36854 (9) | 0.30423 (8) | 0.0391 | |
| C4 | 0.2687 (2) | 0.33058 (9) | 0.25996 (7) | 0.0392 | |
| C5 | 0.4591 (2) | 0.28990 (8) | 0.29445 (7) | 0.0344 | |
| C6 | 0.5061 (2) | 0.28359 (7) | 0.37441 (7) | 0.0279 | |
| C7 | 0.6996 (2) | 0.23388 (8) | 0.40716 (7) | 0.0304 | |
| C8 | 0.7115 (2) | 0.18488 (8) | 0.46816 (7) | 0.0301 | |
| C9 | 0.5383 (2) | 0.17092 (8) | 0.51782 (6) | 0.0269 | |
| C10 | 0.5251 (2) | 0.09343 (8) | 0.55037 (7) | 0.0341 | |
| C11 | 0.3603 (2) | 0.07491 (9) | 0.59538 (8) | 0.0398 | |
| C12 | 0.2069 (2) | 0.13407 (9) | 0.61005 (8) | 0.0389 | |
| C13 | 0.2205 (2) | 0.21186 (8) | 0.58012 (7) | 0.0321 | |
| C14 | 0.3844 (2) | 0.23123 (7) | 0.53434 (6) | 0.0258 | |
| C15 | 0.4034 (2) | 0.31760 (7) | 0.50530 (6) | 0.0257 | |
| C16 | 0.6242 (2) | 0.35710 (7) | 0.54306 (7) | 0.0276 | |
| C17 | 0.3158 (3) | 0.57421 (11) | 0.16558 (9) | 0.0568 | |
| C18 | 0.5184 (3) | 0.60108 (10) | 0.22080 (8) | 0.0455 | |
| C19 | 0.5957 (2) | 0.53835 (9) | 0.28103 (8) | 0.0371 | |
| C20 | 0.8040 (2) | 0.56040 (8) | 0.33497 (7) | 0.0295 | |
| O1 | 0.70946 (16) | 0.33413 (6) | 0.60746 (5) | 0.0369 | |
| O2 | 0.84351 (15) | 0.53413 (6) | 0.39986 (5) | 0.0346 | |
| N1 | 0.7091 (2) | 0.41860 (7) | 0.50777 (6) | 0.0335 | |
| O3 | 0.94149 (17) | 0.61035 (6) | 0.30567 (5) | 0.0435 | |
| H151 | 0.2828 | 0.3488 | 0.5249 | 0.0293* | |
| H21 | 0.0713 | 0.3916 | 0.4145 | 0.0377* | |
| H81 | 0.8456 | 0.1498 | 0.4786 | 0.0333* | |
| H71 | 0.8293 | 0.2332 | 0.3790 | 0.0372* | |
| H191 | 0.4766 | 0.5266 | 0.3115 | 0.0486* | |
| H192 | 0.6295 | 0.4889 | 0.2564 | 0.0473* | |
| H131 | 0.1155 | 0.2536 | 0.5914 | 0.0383* | |
| H101 | 0.6291 | 0.0526 | 0.5389 | 0.0392* | |
| H41 | 0.2338 | 0.3317 | 0.2057 | 0.0465* | |
| H121 | 0.0935 | 0.1222 | 0.6419 | 0.0464* | |
| H51 | 0.5637 | 0.2636 | 0.2641 | 0.0395* | |
| H111 | 0.3507 | 0.0214 | 0.6150 | 0.0470* | |
| H182 | 0.4770 | 0.6515 | 0.2459 | 0.0609* | |
| H181 | 0.6503 | 0.6120 | 0.1946 | 0.0611* | |
| H31 | −0.0099 | 0.3971 | 0.2794 | 0.0463* | |
| H172 | 0.2712 | 0.6162 | 0.1279 | 0.0868* | |
| H173 | 0.1858 | 0.5625 | 0.1933 | 0.0867* | |
| H171 | 0.3504 | 0.5240 | 0.1402 | 0.0875* | |
| H12 | 0.834 (2) | 0.4432 (9) | 0.5320 (8) | 0.0446* | |
| H11 | 0.652 (2) | 0.4352 (9) | 0.4630 (8) | 0.0433* | |
| H311 | 1.058 (3) | 0.6243 (11) | 0.3395 (9) | 0.0689* |
| C1 | 0.0283 (6) | 0.0234 (6) | 0.0265 (6) | −0.0013 (5) | 0.0032 (5) | −0.0008 (5) |
| C2 | 0.0315 (7) | 0.0305 (7) | 0.0348 (7) | 0.0030 (5) | 0.0040 (5) | 0.0027 (5) |
| C3 | 0.0366 (8) | 0.0396 (8) | 0.0383 (7) | 0.0032 (6) | −0.0041 (6) | 0.0075 (6) |
| C4 | 0.0476 (8) | 0.0422 (8) | 0.0259 (6) | −0.0032 (7) | −0.0010 (6) | 0.0030 (6) |
| C5 | 0.0414 (8) | 0.0345 (8) | 0.0279 (6) | −0.0020 (6) | 0.0075 (6) | −0.0025 (5) |
| C6 | 0.0297 (6) | 0.0258 (7) | 0.0279 (6) | −0.0019 (5) | 0.0031 (5) | −0.0021 (5) |
| C7 | 0.0287 (6) | 0.0318 (7) | 0.0315 (6) | 0.0018 (5) | 0.0065 (5) | −0.0068 (5) |
| C8 | 0.0270 (6) | 0.0295 (7) | 0.0321 (6) | 0.0056 (5) | −0.0016 (5) | −0.0067 (5) |
| C9 | 0.0273 (6) | 0.0284 (7) | 0.0227 (6) | −0.0004 (5) | −0.0051 (5) | −0.0026 (5) |
| C10 | 0.0388 (7) | 0.0291 (7) | 0.0313 (6) | 0.0021 (6) | −0.0057 (6) | −0.0015 (5) |
| C11 | 0.0507 (9) | 0.0310 (8) | 0.0347 (7) | −0.0078 (6) | −0.0051 (6) | 0.0073 (6) |
| C12 | 0.0384 (8) | 0.0448 (9) | 0.0327 (7) | −0.0111 (7) | 0.0021 (6) | 0.0063 (6) |
| C13 | 0.0298 (7) | 0.0379 (8) | 0.0275 (6) | −0.0022 (6) | 0.0010 (5) | −0.0008 (5) |
| C14 | 0.0264 (6) | 0.0277 (7) | 0.0215 (5) | −0.0016 (5) | −0.0027 (5) | −0.0024 (5) |
| C15 | 0.0270 (6) | 0.0256 (7) | 0.0252 (6) | 0.0034 (5) | 0.0055 (5) | −0.0028 (5) |
| C16 | 0.0334 (7) | 0.0245 (6) | 0.0252 (6) | 0.0009 (5) | 0.0059 (5) | −0.0041 (5) |
| C17 | 0.0518 (10) | 0.0666 (12) | 0.0470 (9) | 0.0033 (8) | −0.0109 (7) | −0.0040 (8) |
| C18 | 0.0467 (9) | 0.0430 (9) | 0.0435 (8) | −0.0033 (7) | −0.0052 (7) | 0.0042 (7) |
| C19 | 0.0398 (8) | 0.0347 (8) | 0.0361 (7) | −0.0062 (6) | 0.0026 (6) | −0.0017 (6) |
| C20 | 0.0366 (7) | 0.0246 (7) | 0.0279 (6) | −0.0004 (5) | 0.0066 (5) | −0.0014 (5) |
| O2 | 0.0421 (5) | 0.0326 (5) | 0.0290 (5) | −0.0029 (4) | 0.0045 (4) | 0.0035 (4) |
| N1 | 0.0402 (7) | 0.0304 (6) | 0.0291 (5) | −0.0056 (5) | 0.0024 (5) | 0.0018 (5) |
| O3 | 0.0457 (6) | 0.0529 (7) | 0.0297 (5) | −0.0205 (5) | −0.0027 (4) | 0.0077 (4) |
| O1 | 0.0441 (5) | 0.0373 (5) | 0.0271 (4) | −0.0124 (4) | −0.0027 (4) | 0.0021 (4) |
| C1—C2 | 1.3924 (17) | C12—H121 | 0.956 |
| C1—C6 | 1.4018 (17) | C13—C14 | 1.3860 (17) |
| C1—C15 | 1.5133 (15) | C13—H131 | 0.965 |
| C2—C3 | 1.3811 (18) | C14—C15 | 1.5129 (17) |
| C2—H21 | 0.975 | C15—C16 | 1.5282 (17) |
| C3—C4 | 1.380 (2) | C15—H151 | 0.981 |
| C3—H31 | 0.980 | C16—N1 | 1.3204 (16) |
| C4—C5 | 1.378 (2) | C16—O1 | 1.2376 (14) |
| C4—H41 | 0.952 | C17—C18 | 1.504 (2) |
| C5—C6 | 1.4054 (17) | C17—H172 | 0.968 |
| C5—H51 | 0.976 | C17—H173 | 0.988 |
| C6—C7 | 1.4591 (17) | C17—H171 | 0.971 |
| C7—C8 | 1.3373 (18) | C18—C19 | 1.5034 (19) |
| C7—H71 | 0.974 | C18—H182 | 0.984 |
| C8—C9 | 1.4601 (18) | C18—H181 | 0.980 |
| C8—H81 | 0.977 | C19—C20 | 1.4956 (18) |
| C9—C10 | 1.3988 (18) | C19—H191 | 0.967 |
| C9—C14 | 1.4026 (17) | C19—H192 | 0.954 |
| C10—C11 | 1.3778 (19) | C20—O2 | 1.2165 (14) |
| C10—H101 | 0.950 | C20—O3 | 1.3114 (15) |
| C11—C12 | 1.378 (2) | N1—H12 | 0.899 (14) |
| C11—H111 | 0.946 | N1—H11 | 0.860 (14) |
| C12—C13 | 1.3848 (19) | O3—H311 | 0.880 (14) |
| C2—C1—C6 | 119.25 (11) | C14—C13—H131 | 119.0 |
| C2—C1—C15 | 119.95 (11) | C9—C14—C13 | 119.42 (12) |
| C6—C1—C15 | 120.79 (10) | C9—C14—C15 | 120.31 (11) |
| C1—C2—C3 | 121.06 (12) | C13—C14—C15 | 120.22 (11) |
| C1—C2—H21 | 118.6 | C1—C15—C14 | 112.44 (10) |
| C3—C2—H21 | 120.4 | C1—C15—C16 | 115.54 (10) |
| C2—C3—C4 | 120.03 (13) | C14—C15—C16 | 110.29 (10) |
| C2—C3—H31 | 120.5 | C1—C15—H151 | 107.5 |
| C4—C3—H31 | 119.5 | C14—C15—H151 | 105.8 |
| C3—C4—C5 | 119.87 (12) | C16—C15—H151 | 104.4 |
| C3—C4—H41 | 119.9 | C15—C16—N1 | 118.47 (11) |
| C5—C4—H41 | 120.2 | C15—C16—O1 | 119.24 (11) |
| C4—C5—C6 | 121.01 (12) | N1—C16—O1 | 122.14 (12) |
| C4—C5—H51 | 121.0 | C18—C17—H172 | 110.8 |
| C6—C5—H51 | 118.0 | C18—C17—H173 | 110.1 |
| C5—C6—C1 | 118.72 (11) | H172—C17—H173 | 108.7 |
| C5—C6—C7 | 118.30 (11) | C18—C17—H171 | 110.2 |
| C1—C6—C7 | 122.92 (11) | H172—C17—H171 | 109.7 |
| C6—C7—C8 | 127.14 (12) | H173—C17—H171 | 107.2 |
| C6—C7—H71 | 116.0 | C17—C18—C19 | 113.39 (13) |
| C8—C7—H71 | 116.7 | C17—C18—H182 | 108.1 |
| C7—C8—C9 | 128.04 (12) | C19—C18—H182 | 108.9 |
| C7—C8—H81 | 117.0 | C17—C18—H181 | 111.4 |
| C9—C8—H81 | 114.7 | C19—C18—H181 | 105.9 |
| C8—C9—C10 | 118.27 (11) | H182—C18—H181 | 109.0 |
| C8—C9—C14 | 123.29 (11) | C18—C19—C20 | 115.46 (11) |
| C10—C9—C14 | 118.45 (11) | C18—C19—H191 | 110.9 |
| C9—C10—C11 | 121.46 (13) | C20—C19—H191 | 107.3 |
| C9—C10—H101 | 118.2 | C18—C19—H192 | 108.6 |
| C11—C10—H101 | 120.2 | C20—C19—H192 | 106.7 |
| C10—C11—C12 | 119.67 (13) | H191—C19—H192 | 107.6 |
| C10—C11—H111 | 120.0 | C19—C20—O2 | 123.28 (12) |
| C12—C11—H111 | 120.3 | C19—C20—O3 | 113.77 (11) |
| C11—C12—C13 | 119.87 (13) | O2—C20—O3 | 122.95 (12) |
| C11—C12—H121 | 120.4 | C16—N1—H12 | 117.5 (10) |
| C13—C12—H121 | 119.7 | C16—N1—H11 | 123.2 (10) |
| C12—C13—C14 | 121.09 (13) | H12—N1—H11 | 119.3 (14) |
| C12—C13—H131 | 119.9 | C20—O3—H311 | 111.5 (12) |
| C6—C1—C2—C3 | 0.48 (19) | C14—C9—C10—C11 | 2.43 (18) |
| C15—C1—C2—C3 | −178.34 (12) | C8—C9—C14—C13 | 177.89 (11) |
| C2—C1—C6—C5 | 1.17 (17) | C8—C9—C14—C15 | −4.73 (17) |
| C2—C1—C6—C7 | −176.25 (11) | C10—C9—C14—C13 | −1.96 (17) |
| C15—C1—C6—C5 | 180.00 (12) | C10—C9—C14—C15 | 175.42 (10) |
| C15—C1—C6—C7 | 2.57 (18) | C9—C10—C11—C12 | −1.2 (2) |
| C2—C1—C15—C14 | 114.81 (12) | C10—C11—C12—C13 | −0.6 (2) |
| C2—C1—C15—C16 | −117.37 (12) | C11—C12—C13—C14 | 1.0 (2) |
| C6—C1—C15—C14 | −63.99 (14) | C12—C13—C14—C9 | 0.28 (18) |
| C6—C1—C15—C16 | 63.83 (14) | C12—C13—C14—C15 | −177.10 (11) |
| C1—C2—C3—C4 | −0.7 (2) | C9—C14—C15—C1 | 64.61 (14) |
| C2—C3—C4—C5 | −0.8 (2) | C9—C14—C15—C16 | −65.93 (13) |
| C3—C4—C5—C6 | 2.5 (2) | C13—C14—C15—C1 | −118.03 (12) |
| C4—C5—C6—C1 | −2.67 (18) | C13—C14—C15—C16 | 111.43 (12) |
| C4—C5—C6—C7 | 174.87 (12) | C1—C15—C16—O1 | −156.56 (11) |
| C1—C6—C7—C8 | 36.0 (2) | C1—C15—C16—N1 | 27.97 (15) |
| C5—C6—C7—C8 | −141.46 (14) | C14—C15—C16—O1 | −27.68 (15) |
| C6—C7—C8—C9 | −1.9 (2) | C14—C15—C16—N1 | 156.85 (11) |
| C7—C8—C9—C10 | 147.22 (13) | C17—C18—C19—C20 | 177.01 (13) |
| C7—C8—C9—C14 | −32.6 (2) | C18—C19—C20—O2 | 152.97 (13) |
| C8—C9—C10—C11 | −177.43 (12) | C18—C19—C20—O3 | −27.50 (17) |
| H··· | ||||
| N1—H11···O2 | 0.860 (14) | 2.348 (14) | 2.8761 (15) | 120.0 (10) |
| N1—H12···O2i | 0.898 (13) | 2.146 (13) | 3.0167 (15) | 163.2 (13) |
| O3—H311···O1i | 0.879 (17) | 1.698 (17) | 2.5658 (13) | 168.8 (16) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H11⋯O2 | 0.860 (14) | 2.348 (14) | 2.8761 (15) | 120.0 (10) |
| N1—H12⋯O2i | 0.898 (13) | 2.146 (13) | 3.0167 (15) | 163.2 (13) |
| O3—H311⋯O1i | 0.879 (17) | 1.698 (17) | 2.5658 (13) | 168.8 (16) |
Symmetry code: (i) .