Literature DB >> 21202904

2-[(E)-(5-Amino-2,3-diphenyl-quinoxalin-6-yl)imino-meth-yl]-4-bromo-phenol.

Hoong-Kun Fun, Reza Kia, Paul R Raithby.   

Abstract

The title compound, C(27)H(19)BrN(4)O, is a mono-anil Schiff base ligand. Three intra-molecular O-H⋯N and N-H⋯N hydrogen bonds involving the hydr-oxy and amino groups generate S(6) and S(5) ring motifs, respectively. In the crystal structure, weak inter-molecular N-H⋯O and C-H⋯O hydrogen bonds together with π-π inter-actions [centroid-centroid distances = 3.628 (3)-3.729 (3) Å] link neighboring mol-ecules.

Entities:  

Year:  2008        PMID: 21202904      PMCID: PMC2961755          DOI: 10.1107/S1600536808017716

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For bond-length data, see: Allen et al. (1987 ▶). For related structures see, for example: Corden et al. (1996 ▶); Govindasamy et al. (1999 ▶). For applications and bioactivities see, for example: Blower (1998 ▶); Cohen & Schmidt (1964 ▶); Granovski et al. (1993 ▶); Kia et al. (2004 ▶); Li & Chang (1991 ▶); Shahrokhian et al. (2000 ▶); Uhlenbrock et al. (1996 ▶); Unaleroglu & Hokelek (2002 ▶). For related literature, see: Anderson et al. (1997 ▶); Blower (1998 ▶).

Experimental

Crystal data

C27H19BrN4O M = 495.37 Monoclinic, a = 22.923 (5) Å b = 7.344 (5) Å c = 12.573 (5) Å β = 92.070 (5)° V = 2115.2 (17) Å3 Z = 4 Mo Kα radiation μ = 1.97 mm−1 T = 100.0 (1) K 0.39 × 0.37 × 0.08 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.510, T max = 0.853 22554 measured reflections 6205 independent reflections 3722 reflections with I > 2σ(I) R int = 0.070

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.142 S = 1.06 6205 reflections 305 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.61 e Å−3 Δρmin = −1.07 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808017716/sj2516sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808017716/sj2516Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C27H19BrN4OF000 = 1008
Mr = 495.37Dx = 1.556 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71069 Å
Hall symbol: -P 2ybcCell parameters from 4509 reflections
a = 22.923 (5) Åθ = 2.9–28.3º
b = 7.344 (5) ŵ = 1.97 mm1
c = 12.573 (5) ÅT = 100.0 (1) K
β = 92.070 (5)ºBlock, yellow
V = 2115.2 (17) Å30.39 × 0.37 × 0.08 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer6205 independent reflections
Radiation source: fine-focus sealed tube3722 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.070
T = 100.0(1) Kθmax = 30.1º
φ and ω scansθmin = 0.9º
Absorption correction: multi-scan(SADABS; Bruker, 2005)h = −32→32
Tmin = 0.510, Tmax = 0.853k = −10→8
22554 measured reflectionsl = −16→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.045H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.142  w = 1/[σ2(Fo2) + (0.0698P)2] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.001
6205 reflectionsΔρmax = 0.62 e Å3
305 parametersΔρmin = −1.07 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.259515 (13)0.53134 (5)0.59180 (3)0.02170 (12)
N10.52495 (11)0.6363 (4)0.7764 (2)0.0171 (6)
N20.60814 (13)0.5339 (4)0.9285 (2)0.0186 (6)
N40.72399 (11)0.5294 (4)0.8819 (2)0.0154 (6)
N30.76064 (11)0.6677 (4)0.6873 (2)0.0169 (6)
O10.44969 (9)0.7345 (3)0.91363 (18)0.0206 (5)
H1O10.48130.71010.88770.025*
C10.40804 (13)0.6934 (4)0.8389 (3)0.0177 (7)
C20.34965 (14)0.7191 (4)0.8608 (3)0.0188 (7)
H20.33980.76940.92560.023*
C30.30643 (13)0.6715 (5)0.7882 (3)0.0205 (8)
H30.26750.68830.80440.025*
C40.32022 (13)0.5985 (5)0.6910 (3)0.0183 (7)
C50.37775 (13)0.5769 (4)0.6645 (3)0.0176 (7)
H50.38660.53050.59820.021*
C60.42273 (13)0.6246 (4)0.7373 (3)0.0162 (7)
C70.48319 (13)0.6048 (5)0.7087 (3)0.0166 (7)
H70.49170.56880.64000.010 (8)*
C80.58402 (12)0.6335 (4)0.7490 (3)0.0146 (7)
C90.60282 (13)0.6891 (4)0.6473 (3)0.0174 (7)
H90.57520.72030.59450.021*
C100.66057 (13)0.6973 (4)0.6258 (3)0.0170 (7)
H100.67210.73440.55910.020*
C110.70293 (13)0.6494 (4)0.7053 (3)0.0159 (7)
C140.68498 (13)0.5891 (4)0.8062 (3)0.0135 (6)
C150.62412 (13)0.5842 (4)0.8283 (3)0.0157 (7)
C120.79874 (13)0.6218 (5)0.7641 (3)0.0165 (7)
C130.78033 (13)0.5390 (4)0.8603 (3)0.0161 (7)
C160.82122 (13)0.4561 (5)0.9406 (3)0.0174 (7)
C170.81113 (14)0.4750 (5)1.0488 (3)0.0185 (7)
H170.77930.54281.07020.022*
C180.84782 (13)0.3944 (5)1.1246 (3)0.0199 (7)
H180.84080.40861.19650.024*
C190.89531 (14)0.2918 (5)1.0935 (3)0.0223 (8)
H190.92050.23931.14440.027*
C200.90483 (14)0.2686 (5)0.9858 (3)0.0224 (8)
H200.93580.19700.96450.027*
C210.86863 (13)0.3509 (5)0.9104 (3)0.0196 (7)
H210.87580.33640.83860.024*
C220.86036 (13)0.6776 (4)0.7467 (3)0.0166 (7)
C230.89337 (13)0.7640 (5)0.8263 (3)0.0198 (7)
H230.87860.77580.89390.024*
C240.94824 (14)0.8330 (5)0.8060 (3)0.0220 (8)
H240.97010.89160.85950.026*
C250.97015 (14)0.8138 (5)0.7048 (3)0.0215 (8)
H251.00680.86030.69060.026*
C260.93829 (14)0.7271 (5)0.6262 (3)0.0215 (8)
H260.95350.71370.55900.026*
C270.88320 (13)0.6588 (5)0.6463 (3)0.0198 (7)
H270.86150.60040.59250.024*
H2N20.6362 (17)0.487 (5)0.970 (3)0.024*
H1N20.5740 (17)0.479 (5)0.925 (3)0.024*
U11U22U33U12U13U23
Br10.01741 (16)0.02067 (18)0.0269 (2)−0.00067 (13)−0.00060 (13)0.00133 (17)
N10.0177 (13)0.0150 (15)0.0187 (16)0.0014 (10)0.0023 (11)0.0015 (12)
N20.0185 (13)0.0240 (15)0.0134 (15)−0.0013 (12)0.0037 (11)0.0011 (13)
N40.0168 (12)0.0141 (13)0.0152 (15)−0.0001 (10)0.0007 (10)−0.0019 (12)
N30.0178 (13)0.0166 (15)0.0163 (15)−0.0007 (10)0.0011 (11)−0.0018 (12)
O10.0200 (11)0.0251 (14)0.0169 (13)−0.0002 (9)0.0033 (10)−0.0002 (11)
C10.0213 (16)0.0129 (17)0.0190 (19)−0.0012 (12)0.0019 (14)0.0034 (14)
C20.0228 (16)0.0151 (17)0.0189 (19)0.0015 (12)0.0044 (14)0.0051 (14)
C30.0166 (15)0.0174 (18)0.028 (2)0.0021 (12)0.0043 (14)0.0079 (15)
C40.0191 (15)0.0133 (16)0.022 (2)−0.0001 (12)0.0016 (13)0.0046 (15)
C50.0197 (15)0.0155 (17)0.0178 (19)0.0018 (12)0.0028 (13)0.0011 (13)
C60.0186 (15)0.0131 (17)0.0168 (18)−0.0003 (12)0.0026 (13)0.0018 (14)
C70.0198 (15)0.0130 (16)0.0171 (19)0.0009 (12)0.0010 (13)0.0022 (14)
C80.0155 (14)0.0128 (16)0.0156 (18)−0.0012 (11)0.0012 (12)−0.0013 (13)
C90.0194 (15)0.0153 (17)0.0174 (19)−0.0003 (12)0.0001 (13)0.0022 (14)
C100.0190 (15)0.0168 (17)0.0155 (18)−0.0007 (12)0.0027 (13)0.0025 (14)
C110.0179 (15)0.0135 (16)0.0163 (18)−0.0003 (11)0.0034 (13)−0.0002 (13)
C140.0181 (15)0.0085 (14)0.0137 (17)0.0002 (11)−0.0012 (12)−0.0002 (13)
C150.0216 (15)0.0112 (15)0.0145 (18)−0.0016 (12)0.0027 (13)−0.0036 (13)
C120.0154 (14)0.0182 (17)0.0161 (18)0.0002 (12)0.0028 (13)−0.0020 (14)
C130.0164 (14)0.0151 (16)0.0169 (18)0.0011 (12)0.0021 (12)−0.0046 (15)
C160.0155 (14)0.0176 (17)0.0192 (19)−0.0021 (12)0.0018 (12)0.0008 (15)
C170.0195 (15)0.0181 (16)0.0180 (19)−0.0017 (13)0.0024 (13)−0.0013 (15)
C180.0201 (16)0.0218 (18)0.0179 (19)−0.0010 (13)0.0003 (13)0.0030 (15)
C190.0174 (16)0.025 (2)0.024 (2)0.0000 (13)−0.0026 (14)0.0043 (16)
C200.0173 (15)0.0227 (19)0.028 (2)0.0054 (13)0.0036 (14)0.0021 (16)
C210.0201 (16)0.0191 (18)0.0198 (19)0.0015 (12)0.0037 (14)0.0013 (15)
C220.0160 (14)0.0162 (17)0.0180 (18)0.0006 (12)0.0034 (13)−0.0004 (14)
C230.0188 (15)0.0250 (19)0.0158 (19)−0.0009 (13)0.0034 (13)−0.0012 (15)
C240.0202 (16)0.0253 (19)0.020 (2)−0.0019 (13)0.0001 (14)0.0012 (16)
C250.0162 (15)0.027 (2)0.022 (2)0.0006 (13)0.0034 (14)0.0050 (16)
C260.0203 (16)0.028 (2)0.0165 (19)0.0026 (13)0.0049 (14)0.0002 (16)
C270.0210 (16)0.0221 (19)0.0164 (19)0.0029 (13)0.0015 (13)−0.0019 (15)
Br1—C41.900 (4)C10—H100.9300
N1—C71.279 (4)C11—C141.418 (4)
N1—C81.409 (3)C14—C151.433 (4)
N2—C151.376 (4)C12—C131.431 (4)
N2—H2N20.88 (4)C12—C221.495 (4)
N2—H1N20.88 (4)C13—C161.483 (5)
N4—C131.331 (4)C16—C171.396 (5)
N4—C141.355 (4)C16—C211.397 (4)
N3—C121.322 (4)C17—C181.382 (5)
N3—C111.357 (4)C17—H170.9300
O1—C11.350 (4)C18—C191.391 (4)
O1—H1O10.8254C18—H180.9300
C1—C21.389 (4)C19—C201.390 (5)
C1—C61.425 (5)C19—H190.9300
C2—C31.368 (5)C20—C211.377 (5)
C2—H20.9300C20—H200.9300
C3—C41.382 (5)C21—H210.9300
C3—H30.9300C22—C231.386 (5)
C4—C51.381 (4)C22—C271.391 (4)
C5—C61.398 (5)C23—C241.388 (4)
C5—H50.9300C23—H230.9300
C6—C71.452 (4)C24—C251.392 (5)
C7—H70.9300C24—H240.9300
C8—C151.380 (5)C25—C261.365 (5)
C8—C91.424 (4)C25—H250.9300
C9—C101.362 (4)C26—C271.390 (4)
C9—H90.9300C26—H260.9300
C10—C111.413 (5)C27—H270.9300
C7—N1—C8122.5 (3)N2—C15—C14118.5 (3)
C15—N2—H2N2116 (3)C8—C15—C14118.8 (3)
C15—N2—H1N2110 (3)N3—C12—C13121.2 (3)
H2N2—N2—H1N2118 (4)N3—C12—C22115.2 (3)
C13—N4—C14117.4 (3)C13—C12—C22123.3 (3)
C12—N3—C11118.3 (3)N4—C13—C12120.8 (3)
C1—O1—H1O1106.6N4—C13—C16115.7 (3)
O1—C1—C2119.6 (3)C12—C13—C16123.4 (3)
O1—C1—C6121.3 (3)C17—C16—C21118.5 (3)
C2—C1—C6119.1 (3)C17—C16—C13120.0 (3)
C3—C2—C1120.9 (3)C21—C16—C13121.4 (3)
C3—C2—H2119.6C18—C17—C16120.8 (3)
C1—C2—H2119.6C18—C17—H17119.6
C2—C3—C4120.4 (3)C16—C17—H17119.6
C2—C3—H3119.8C17—C18—C19120.0 (3)
C4—C3—H3119.8C17—C18—H18120.0
C5—C4—C3120.6 (3)C19—C18—H18120.0
C5—C4—Br1119.7 (3)C20—C19—C18119.5 (3)
C3—C4—Br1119.7 (2)C20—C19—H19120.2
C4—C5—C6120.1 (3)C18—C19—H19120.2
C4—C5—H5119.9C21—C20—C19120.3 (3)
C6—C5—H5119.9C21—C20—H20119.8
C5—C6—C1118.9 (3)C19—C20—H20119.8
C5—C6—C7120.0 (3)C20—C21—C16120.8 (3)
C1—C6—C7121.1 (3)C20—C21—H21119.6
N1—C7—C6121.0 (3)C16—C21—H21119.6
N1—C7—H7119.5C23—C22—C27119.1 (3)
C6—C7—H7119.5C23—C22—C12121.0 (3)
C15—C8—N1116.6 (3)C27—C22—C12119.6 (3)
C15—C8—C9120.6 (3)C22—C23—C24120.6 (3)
N1—C8—C9122.7 (3)C22—C23—H23119.7
C10—C9—C8121.2 (3)C24—C23—H23119.7
C10—C9—H9119.4C23—C24—C25119.3 (3)
C8—C9—H9119.4C23—C24—H24120.3
C9—C10—C11119.8 (3)C25—C24—H24120.3
C9—C10—H10120.1C26—C25—C24120.5 (3)
C11—C10—H10120.1C26—C25—H25119.7
N3—C11—C10120.4 (3)C24—C25—H25119.7
N3—C11—C14119.8 (3)C25—C26—C27120.2 (3)
C10—C11—C14119.8 (3)C25—C26—H26119.9
N4—C14—C11121.6 (3)C27—C26—H26119.9
N4—C14—C15118.6 (3)C26—C27—C22120.2 (3)
C11—C14—C15119.8 (3)C26—C27—H27119.9
N2—C15—C8122.7 (3)C22—C27—H27119.9
O1—C1—C2—C3−177.3 (3)C11—C14—C15—N2−176.8 (3)
C6—C1—C2—C33.1 (5)N4—C14—C15—C8−175.8 (3)
C1—C2—C3—C4−0.7 (5)C11—C14—C15—C82.0 (5)
C2—C3—C4—C5−1.7 (5)C11—N3—C12—C135.7 (5)
C2—C3—C4—Br1179.5 (2)C11—N3—C12—C22−169.0 (3)
C3—C4—C5—C61.6 (5)C14—N4—C13—C124.5 (4)
Br1—C4—C5—C6−179.5 (2)C14—N4—C13—C16−174.3 (3)
C4—C5—C6—C10.7 (5)N3—C12—C13—N4−9.6 (5)
C4—C5—C6—C7−178.9 (3)C22—C12—C13—N4164.7 (3)
O1—C1—C6—C5177.3 (3)N3—C12—C13—C16169.1 (3)
C2—C1—C6—C5−3.1 (5)C22—C12—C13—C16−16.6 (5)
O1—C1—C6—C7−3.1 (5)N4—C13—C16—C17−39.1 (4)
C2—C1—C6—C7176.6 (3)C12—C13—C16—C17142.2 (3)
C8—N1—C7—C6−174.5 (3)N4—C13—C16—C21137.8 (3)
C5—C6—C7—N1−175.3 (3)C12—C13—C16—C21−40.9 (5)
C1—C6—C7—N15.0 (5)C21—C16—C17—C181.2 (5)
C7—N1—C8—C15−150.5 (3)C13—C16—C17—C18178.1 (3)
C7—N1—C8—C933.4 (5)C16—C17—C18—C19−0.4 (5)
C15—C8—C9—C10−0.8 (5)C17—C18—C19—C20−1.2 (5)
N1—C8—C9—C10175.2 (3)C18—C19—C20—C212.0 (5)
C8—C9—C10—C110.3 (5)C19—C20—C21—C16−1.2 (5)
C12—N3—C11—C10179.8 (3)C17—C16—C21—C20−0.4 (5)
C12—N3—C11—C142.5 (4)C13—C16—C21—C20−177.3 (3)
C9—C10—C11—N3−175.9 (3)N3—C12—C22—C23132.1 (3)
C9—C10—C11—C141.4 (5)C13—C12—C22—C23−42.5 (5)
C13—N4—C14—C113.7 (5)N3—C12—C22—C27−41.7 (4)
C13—N4—C14—C15−178.6 (3)C13—C12—C22—C27143.7 (3)
N3—C11—C14—N4−7.5 (5)C27—C22—C23—C240.8 (5)
C10—C11—C14—N4175.2 (3)C12—C22—C23—C24−173.0 (3)
N3—C11—C14—C15174.8 (3)C22—C23—C24—C25−0.4 (5)
C10—C11—C14—C15−2.5 (5)C23—C24—C25—C26−0.4 (5)
N1—C8—C15—N22.1 (5)C24—C25—C26—C270.7 (5)
C9—C8—C15—N2178.4 (3)C25—C26—C27—C22−0.3 (5)
N1—C8—C15—C14−176.6 (3)C23—C22—C27—C26−0.4 (5)
C9—C8—C15—C14−0.3 (5)C12—C22—C27—C26173.4 (3)
N4—C14—C15—N25.5 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1O1···N10.831.832.586 (4)151
N2—H2N2···N40.88 (4)2.35 (4)2.740 (4)107 (3)
N2—H1N2···N10.88 (4)2.44 (4)2.756 (4)102 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1O1⋯N10.831.832.586 (4)151
N2—H2N2⋯N40.88 (4)2.35 (4)2.740 (4)107 (3)
N2—H1N2⋯N10.88 (4)2.44 (4)2.756 (4)102 (3)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Salicylate-selective electrodes based on AI(III) and Sn(IV) salophens

Authors: 
Journal:  Anal Chem       Date:  2000-03-01       Impact factor: 6.986

  2 in total
  1 in total

1.  2-[(E)-(5-Amino-2,3-diphenyl-quinoxalin-6-yl)imino-meth-yl]-4-chloro-phenol.

Authors:  Hoong-Kun Fun; Reza Kia; Paul R Raithby
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-05
  1 in total

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