| Literature DB >> 21202902 |
Hai Wang, Hua-Ze Dong, Ning Lu, Hai-Bin Zhu.
Abstract
The mol-ecule of the title compound, C(12)H(10)N(6), which is V-shaped due to the boat conformation of the dihydro-tetra-zine ring, has crystallographic C(2) symmetry. The dihedral angle between the planes of the two pyridine rings is 31.57 (3)°. Mol-ecules are linked by weak N-H⋯N and C-H⋯N hydrogen bonds, forming a two-dimensional polymeric structure.Entities:
Year: 2008 PMID: 21202902 PMCID: PMC2961757 DOI: 10.1107/S160053680801742X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H10N6 | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ab 2ac | Cell parameters from 820 reflections |
| θ = 2.5–28.0º | |
| µ = 0.09 mm−1 | |
| Block, red | |
| 0.50 × 0.10 × 0.10 mm |
| Bruker SMART CCD area-detector diffractometer | 1105 independent reflections |
| Radiation source: fine-focus sealed tube | 938 reflections with |
| Monochromator: graphite | |
| Detector resolution: 0 pixels mm-1 | θmax = 26.0º |
| θmin = 2.8º | |
| φ and ω scans | |
| Absorption correction: multi-scan(SADABS; Bruker, 2000) | |
| 4214 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 1105 reflections | Δρmax = 0.20 e Å−3 |
| 86 parameters | Δρmin = −0.14 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.56160 (17) | 0.17370 (13) | 0.1811 (4) | 0.0589 (7) | |
| H1A | 0.5769 | 0.2351 | 0.1500 | 0.071* | |
| C2 | 0.65246 (19) | 0.11530 (16) | 0.2327 (4) | 0.0683 (8) | |
| H2A | 0.7286 | 0.1397 | 0.2370 | 0.082* | |
| C3 | 0.52968 (17) | −0.00510 (13) | 0.2686 (3) | 0.0463 (5) | |
| H3A | 0.5172 | −0.0671 | 0.2971 | 0.056* | |
| C4 | 0.43215 (16) | 0.04780 (12) | 0.2202 (3) | 0.0390 (5) | |
| H4A | 0.3571 | 0.0214 | 0.2176 | 0.047* | |
| C5 | 0.44678 (15) | 0.13961 (11) | 0.1762 (3) | 0.0322 (4) | |
| C6 | 0.34693 (13) | 0.20078 (11) | 0.1238 (2) | 0.0296 (4) | |
| N1 | 0.63928 (15) | 0.02634 (11) | 0.2770 (3) | 0.0526 (5) | |
| N2 | 0.36287 (11) | 0.28776 (9) | 0.1283 (2) | 0.0331 (4) | |
| N3 | 0.26087 (12) | 0.33789 (10) | 0.0671 (2) | 0.0332 (4) | |
| H3B | 0.2708 (17) | 0.3931 (14) | 0.097 (3) | 0.047 (6)* |
| C1 | 0.0310 (11) | 0.0379 (11) | 0.108 (2) | −0.0006 (8) | −0.0039 (11) | 0.0119 (11) |
| C2 | 0.0282 (11) | 0.0536 (13) | 0.123 (2) | 0.0004 (9) | −0.0073 (12) | 0.0094 (14) |
| C3 | 0.0396 (13) | 0.0355 (10) | 0.0639 (14) | 0.0077 (8) | −0.0012 (9) | 0.0042 (9) |
| C4 | 0.0294 (10) | 0.0324 (9) | 0.0553 (12) | 0.0011 (7) | −0.0008 (8) | 0.0023 (8) |
| C5 | 0.0273 (9) | 0.0314 (9) | 0.0379 (9) | 0.0025 (7) | 0.0029 (7) | −0.0026 (7) |
| C6 | 0.0255 (9) | 0.0272 (8) | 0.0360 (9) | −0.0013 (6) | 0.0027 (7) | −0.0009 (7) |
| N1 | 0.0357 (10) | 0.0463 (10) | 0.0756 (13) | 0.0111 (7) | −0.0021 (8) | 0.0028 (9) |
| N2 | 0.0238 (8) | 0.0283 (7) | 0.0471 (9) | 0.0007 (6) | 0.0036 (6) | 0.0006 (6) |
| N3 | 0.0270 (8) | 0.0239 (7) | 0.0487 (9) | 0.0011 (6) | 0.0019 (6) | 0.0030 (6) |
| C1—C2 | 1.376 (3) | C4—C5 | 1.374 (2) |
| C1—C5 | 1.387 (2) | C4—H4A | 0.9300 |
| C1—H1A | 0.9300 | C5—C6 | 1.478 (2) |
| C2—N1 | 1.332 (3) | C6—N2 | 1.273 (2) |
| C2—H2A | 0.9300 | C6—N3i | 1.395 (2) |
| C3—N1 | 1.319 (2) | N2—N3 | 1.4249 (18) |
| C3—C4 | 1.382 (3) | N3—C6i | 1.395 (2) |
| C3—H3A | 0.9300 | N3—H3B | 0.83 (2) |
| C2—C1—C5 | 118.94 (18) | C4—C5—C1 | 116.82 (16) |
| C2—C1—H1A | 120.5 | C4—C5—C6 | 122.84 (15) |
| C5—C1—H1A | 120.5 | C1—C5—C6 | 120.33 (16) |
| N1—C2—C1 | 124.8 (2) | N2—C6—N3i | 121.83 (14) |
| N1—C2—H2A | 117.6 | N2—C6—C5 | 118.64 (15) |
| C1—C2—H2A | 117.6 | N3i—C6—C5 | 119.51 (14) |
| N1—C3—C4 | 124.48 (18) | C3—N1—C2 | 115.36 (17) |
| N1—C3—H3A | 117.8 | C6—N2—N3 | 112.51 (13) |
| C4—C3—H3A | 117.8 | C6i—N3—N2 | 114.66 (12) |
| C5—C4—C3 | 119.61 (17) | C6i—N3—H3B | 115.7 (14) |
| C5—C4—H4A | 120.2 | N2—N3—H3B | 107.9 (14) |
| C3—C4—H4A | 120.2 |
| H··· | ||||
| N3—H3B···N1ii | 0.83 (2) | 2.35 (2) | 3.142 (2) | 159.8 (18) |
| C3—H3A···N2iii | 0.93 | 2.55 | 3.312 (2) | 139 |
| C4—H4A···N1iv | 0.93 | 2.55 | 3.475 (3) | 171 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H3 | 0.83 (2) | 2.35 (2) | 3.142 (2) | 159.8 (18) |
| C3—H3 | 0.93 | 2.55 | 3.312 (2) | 139 |
| C4—H4 | 0.93 | 2.55 | 3.475 (3) | 171 |
Symmetry codes: (i) ; (ii) ; (iii) .