| Literature DB >> 21202846 |
Makuteswaran Sridharan, Karnam J Rajendra Prasad, Aimable Ngendahimana, Matthias Zeller.
Abstract
The title compound, C(14)H(15)NO, was synthesized from 2-hydroxy-methyl-enecyclo-hepta-none via a Japp-Klingemann acid-catalyzed cyclization. The seven-membered ring exhibits a slightly distorted envelope conformation. N-H⋯O hydrogen bonds form a centrosymmetric dimer; C-H⋯O hydrogen bonds and π-π stacking inter-actions (the centers of the atoms involved in the stacking interaction are separated by 3.504 Å) give rise to another type of centrosymmetric dimer. In combination, these inter-actions create a stair-like chain of mol-ecules that inter-acts only loosely with neighboring chains via van der Waals inter-actions and weak C-H⋯π contacts.Entities:
Year: 2008 PMID: 21202846 PMCID: PMC2961774 DOI: 10.1107/S1600536808016498
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H15NO | |
| Monoclinic, | Mo |
| Cell parameters from 1265 reflections | |
| θ = 2.3–24.5° | |
| µ = 0.08 mm−1 | |
| β = 92.310 (4)° | |
| Plate, colourless | |
| 0.48 × 0.10 × 0.08 mm |
| Bruker SMART APEX CCD diffractometer | 2652 independent reflections |
| Radiation source: fine-focus sealed tube | 1581 reflections with |
| graphite | |
| ω scans | θmax = 28.3°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 9984 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2652 reflections | (Δ/σ)max < 0.001 |
| 146 parameters | Δρmax = 0.19 e Å−3 |
| 0 restraints | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.13517 (16) | 0.2801 (3) | 1.08139 (13) | 0.0251 (4) | |
| C2 | 0.21105 (17) | 0.3796 (3) | 1.15581 (13) | 0.0284 (5) | |
| H2A | 0.2532 | 0.2688 | 1.1901 | 0.034* | |
| H2B | 0.1589 | 0.4463 | 1.1998 | 0.034* | |
| C3 | 0.30146 (17) | 0.5391 (3) | 1.12828 (14) | 0.0283 (5) | |
| H3A | 0.3491 | 0.5786 | 1.1841 | 0.034* | |
| H3B | 0.3544 | 0.4750 | 1.0841 | 0.034* | |
| C4 | 0.24910 (17) | 0.7329 (3) | 1.08433 (13) | 0.0280 (5) | |
| H4A | 0.1735 | 0.7618 | 1.1125 | 0.034* | |
| H4B | 0.3018 | 0.8500 | 1.0988 | 0.034* | |
| C5 | 0.22933 (17) | 0.7184 (3) | 0.97993 (13) | 0.0272 (5) | |
| H5A | 0.1874 | 0.8438 | 0.9586 | 0.033* | |
| H5B | 0.3066 | 0.7194 | 0.9516 | 0.033* | |
| C6 | 0.16294 (15) | 0.5361 (3) | 0.94335 (13) | 0.0241 (4) | |
| C7 | 0.12670 (16) | 0.3572 (3) | 0.98660 (13) | 0.0243 (4) | |
| C8 | 0.06994 (16) | 0.3237 (3) | 0.83704 (13) | 0.0244 (4) | |
| C9 | 0.02351 (16) | 0.2566 (3) | 0.75210 (13) | 0.0274 (5) | |
| H9 | −0.0126 | 0.1257 | 0.7455 | 0.033* | |
| C10 | 0.03204 (16) | 0.3877 (3) | 0.67779 (14) | 0.0287 (5) | |
| H10 | −0.0003 | 0.3463 | 0.6192 | 0.034* | |
| C11 | 0.08746 (17) | 0.5823 (3) | 0.68576 (13) | 0.0275 (5) | |
| C12 | 0.13502 (16) | 0.6455 (3) | 0.77013 (14) | 0.0271 (5) | |
| H12 | 0.1734 | 0.7746 | 0.7759 | 0.032* | |
| C13 | 0.12601 (16) | 0.5160 (3) | 0.84787 (13) | 0.0245 (4) | |
| C14 | 0.09470 (18) | 0.7160 (3) | 0.60049 (14) | 0.0339 (5) | |
| H14A | 0.1211 | 0.8539 | 0.6187 | 0.051* | |
| H14B | 0.0175 | 0.7250 | 0.5691 | 0.051* | |
| H14C | 0.1502 | 0.6555 | 0.5584 | 0.051* | |
| N1 | 0.07063 (13) | 0.2311 (2) | 0.92167 (10) | 0.0253 (4) | |
| H1 | 0.0402 | 0.1101 | 0.9332 | 0.030* | |
| O1 | 0.07986 (11) | 0.1233 (2) | 1.10088 (9) | 0.0300 (4) |
| C1 | 0.0207 (10) | 0.0302 (10) | 0.0251 (11) | 0.0036 (8) | 0.0076 (8) | 0.0000 (8) |
| C2 | 0.0258 (10) | 0.0348 (11) | 0.0248 (11) | 0.0005 (9) | 0.0034 (9) | 0.0010 (9) |
| C3 | 0.0240 (10) | 0.0350 (11) | 0.0258 (11) | 0.0028 (9) | 0.0002 (8) | −0.0005 (9) |
| C4 | 0.0233 (10) | 0.0321 (11) | 0.0286 (11) | 0.0013 (9) | 0.0017 (9) | −0.0010 (9) |
| C5 | 0.0260 (10) | 0.0312 (11) | 0.0246 (11) | −0.0014 (9) | 0.0036 (9) | 0.0008 (9) |
| C6 | 0.0183 (9) | 0.0305 (10) | 0.0237 (10) | 0.0030 (8) | 0.0032 (8) | −0.0015 (8) |
| C7 | 0.0196 (10) | 0.0294 (10) | 0.0241 (11) | 0.0012 (8) | 0.0037 (8) | −0.0021 (8) |
| C8 | 0.0182 (10) | 0.0309 (10) | 0.0245 (11) | 0.0007 (8) | 0.0050 (8) | 0.0007 (9) |
| C9 | 0.0228 (10) | 0.0337 (11) | 0.0260 (11) | −0.0034 (9) | 0.0049 (8) | −0.0016 (9) |
| C10 | 0.0206 (10) | 0.0429 (12) | 0.0230 (11) | −0.0005 (9) | 0.0051 (8) | −0.0025 (9) |
| C11 | 0.0210 (10) | 0.0380 (12) | 0.0239 (11) | −0.0015 (9) | 0.0048 (8) | 0.0009 (9) |
| C12 | 0.0204 (10) | 0.0327 (11) | 0.0284 (11) | 0.0000 (9) | 0.0060 (8) | 0.0019 (9) |
| C13 | 0.0170 (9) | 0.0321 (11) | 0.0246 (11) | 0.0008 (8) | 0.0044 (8) | −0.0013 (9) |
| C14 | 0.0297 (12) | 0.0439 (13) | 0.0284 (12) | −0.0028 (10) | 0.0067 (9) | 0.0052 (10) |
| N1 | 0.0226 (9) | 0.0292 (9) | 0.0243 (9) | −0.0015 (7) | 0.0035 (7) | 0.0008 (7) |
| O1 | 0.0311 (8) | 0.0309 (8) | 0.0283 (8) | −0.0012 (6) | 0.0070 (6) | 0.0028 (6) |
| C1—O1 | 1.239 (2) | C7—N1 | 1.385 (2) |
| C1—C7 | 1.459 (3) | C8—N1 | 1.364 (2) |
| C1—C2 | 1.502 (3) | C8—C9 | 1.389 (3) |
| C2—C3 | 1.531 (3) | C8—C13 | 1.412 (3) |
| C2—H2A | 0.9900 | C9—C10 | 1.378 (3) |
| C2—H2B | 0.9900 | C9—H9 | 0.9500 |
| C3—C4 | 1.524 (3) | C10—C11 | 1.420 (3) |
| C3—H3A | 0.9900 | C10—H10 | 0.9500 |
| C3—H3B | 0.9900 | C11—C12 | 1.379 (3) |
| C4—C5 | 1.520 (3) | C11—C14 | 1.514 (3) |
| C4—H4A | 0.9900 | C12—C13 | 1.412 (3) |
| C4—H4B | 0.9900 | C12—H12 | 0.9500 |
| C5—C6 | 1.494 (3) | C14—H14A | 0.9800 |
| C5—H5A | 0.9900 | C14—H14B | 0.9800 |
| C5—H5B | 0.9900 | C14—H14C | 0.9800 |
| C6—C7 | 1.393 (3) | N1—H1 | 0.8800 |
| C6—C13 | 1.434 (3) | ||
| O1—C1—C7 | 118.77 (18) | N1—C7—C6 | 109.23 (17) |
| O1—C1—C2 | 118.56 (17) | N1—C7—C1 | 116.39 (17) |
| C7—C1—C2 | 122.64 (18) | C6—C7—C1 | 134.38 (18) |
| C1—C2—C3 | 118.96 (16) | N1—C8—C9 | 130.00 (18) |
| C1—C2—H2A | 107.6 | N1—C8—C13 | 107.80 (17) |
| C3—C2—H2A | 107.6 | C9—C8—C13 | 122.19 (18) |
| C1—C2—H2B | 107.6 | C10—C9—C8 | 117.27 (19) |
| C3—C2—H2B | 107.6 | C10—C9—H9 | 121.4 |
| H2A—C2—H2B | 107.0 | C8—C9—H9 | 121.4 |
| C4—C3—C2 | 114.21 (16) | C9—C10—C11 | 122.29 (19) |
| C4—C3—H3A | 108.7 | C9—C10—H10 | 118.9 |
| C2—C3—H3A | 108.7 | C11—C10—H10 | 118.9 |
| C4—C3—H3B | 108.7 | C12—C11—C10 | 119.84 (18) |
| C2—C3—H3B | 108.7 | C12—C11—C14 | 121.11 (18) |
| H3A—C3—H3B | 107.6 | C10—C11—C14 | 119.04 (18) |
| C5—C4—C3 | 113.79 (16) | C11—C12—C13 | 119.17 (18) |
| C5—C4—H4A | 108.8 | C11—C12—H12 | 120.4 |
| C3—C4—H4A | 108.8 | C13—C12—H12 | 120.4 |
| C5—C4—H4B | 108.8 | C12—C13—C8 | 119.21 (18) |
| C3—C4—H4B | 108.8 | C12—C13—C6 | 133.15 (18) |
| H4A—C4—H4B | 107.7 | C8—C13—C6 | 107.63 (16) |
| C6—C5—C4 | 116.99 (16) | C11—C14—H14A | 109.5 |
| C6—C5—H5A | 108.1 | C11—C14—H14B | 109.5 |
| C4—C5—H5A | 108.1 | H14A—C14—H14B | 109.5 |
| C6—C5—H5B | 108.1 | C11—C14—H14C | 109.5 |
| C4—C5—H5B | 108.1 | H14A—C14—H14C | 109.5 |
| H5A—C5—H5B | 107.3 | H14B—C14—H14C | 109.5 |
| C7—C6—C13 | 105.92 (16) | C8—N1—C7 | 109.40 (16) |
| C7—C6—C5 | 131.40 (17) | C8—N1—H1 | 125.3 |
| C13—C6—C5 | 122.66 (17) | C7—N1—H1 | 125.3 |
| O1—C1—C2—C3 | 165.37 (17) | C9—C10—C11—C12 | 0.0 (3) |
| C7—C1—C2—C3 | −12.8 (3) | C9—C10—C11—C14 | 179.14 (17) |
| C1—C2—C3—C4 | 64.2 (2) | C10—C11—C12—C13 | −1.0 (3) |
| C2—C3—C4—C5 | −88.3 (2) | C14—C11—C12—C13 | 179.88 (17) |
| C3—C4—C5—C6 | 51.7 (2) | C11—C12—C13—C8 | 0.9 (3) |
| C4—C5—C6—C7 | −9.5 (3) | C11—C12—C13—C6 | −178.67 (19) |
| C4—C5—C6—C13 | 172.25 (17) | N1—C8—C13—C12 | −178.80 (16) |
| C13—C6—C7—N1 | 0.32 (19) | C9—C8—C13—C12 | 0.3 (3) |
| C5—C6—C7—N1 | −178.10 (18) | N1—C8—C13—C6 | 0.8 (2) |
| C13—C6—C7—C1 | −179.5 (2) | C9—C8—C13—C6 | 179.93 (16) |
| C5—C6—C7—C1 | 2.0 (3) | C7—C6—C13—C12 | 178.9 (2) |
| O1—C1—C7—N1 | −9.3 (3) | C5—C6—C13—C12 | −2.5 (3) |
| C2—C1—C7—N1 | 168.83 (16) | C7—C6—C13—C8 | −0.71 (19) |
| O1—C1—C7—C6 | 170.51 (19) | C5—C6—C13—C8 | 177.89 (16) |
| C2—C1—C7—C6 | −11.3 (3) | C9—C8—N1—C7 | −179.65 (18) |
| N1—C8—C9—C10 | 177.61 (18) | C13—C8—N1—C7 | −0.7 (2) |
| C13—C8—C9—C10 | −1.3 (3) | C6—C7—N1—C8 | 0.2 (2) |
| C8—C9—C10—C11 | 1.1 (3) | C1—C7—N1—C8 | −179.91 (15) |
| H··· | ||||
| N1—H1···O1i | 0.88 | 2.09 | 2.890 (2) | 150. |
| C4—H4a···O1ii | 0.99 | 2.59 | 3.211 (3) | 121 |
| C2—H2B···Cg1iii | 0.99 | 2.88 | 3.740 (2) | 146 |
| C5—H5b···C10iv | 0.99 | 2.90 | 3.794 (2) | 151 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1i | 0.88 | 2.09 | 2.890 (2) | 150 |
| C4—H4a⋯O1ii | 0.99 | 2.59 | 3.211 (3) | 121 |
| C2—H2 | 0.99 | 2.88 | 3.740 (2) | 146 |
| C5—H5b⋯C10iv | 0.99 | 2.90 | 3.794 (2) | 151 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) . Cg1 is the centroid of the C8–C13 ring.