Literature DB >> 21202741

Bis(5-methyl-pyrazine-2-carboxyl-ato)-diphenyl-tin(IV).

Zhongjun Gao1.   

Abstract

In the mol-ecule of the title compound, [Sn(C(6)H(5))(2)(C(6)H(5)N(2)O(2))(2)], two O and one N atoms from the two 5-methyl-pyrazine-2-carboxyl-ate ligands and one C atom of a phenyl group form a distorted square-planar arrangement in the equatorial plane around the Sn atom, while the distorted octa-hedral coordination is completed by an N atom of one of the 5-methyl-pyrazine-2-carboxyl-ate ligands and a C atom of the other phenyl group in the axial positions. In the crystal structure, inter-molecular C-H⋯O hydrogen bonds link the mol-ecules into centrosymmetric dimers.

Entities:  

Year:  2008        PMID: 21202741      PMCID: PMC2961826          DOI: 10.1107/S1600536808016139

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Gielen et al. (1988 ▶). For related literature, see: Vollano et al. (1984 ▶); Ma et al. (2004 ▶).

Experimental

Crystal data

[Sn(C6H5)2(C6H5N2O2)2] M = 547.13 Monoclinic, a = 12.030 (4) Å b = 14.658 (5) Å c = 13.409 (5) Å β = 91.872 (4)° V = 2363.2 (14) Å3 Z = 4 Mo Kα radiation μ = 1.12 mm−1 T = 298 (2) K 0.45 × 0.43 × 0.18 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.633, T max = 0.824 12010 measured reflections 4166 independent reflections 2732 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.132 S = 1.05 4166 reflections 298 parameters H-atom parameters constrained Δρmax = 0.56 e Å−3 Δρmin = −0.46 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808016139/hk2458sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808016139/hk2458Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Sn(C6H5)2(C6H5N2O2)2]F000 = 1096
Mr = 547.13Dx = 1.538 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3659 reflections
a = 12.030 (4) Åθ = 2.2–24.0º
b = 14.658 (5) ŵ = 1.12 mm1
c = 13.409 (5) ÅT = 298 (2) K
β = 91.872 (4)ºBlock, colorless
V = 2363.2 (14) Å30.45 × 0.43 × 0.18 mm
Z = 4
Bruker SMART CCD area-detector diffractometer4166 independent reflections
Radiation source: fine-focus sealed tube2732 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.039
T = 298(2) Kθmax = 25.0º
φ and ω scansθmin = 2.1º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −12→14
Tmin = 0.633, Tmax = 0.824k = −17→14
12010 measured reflectionsl = −15→15
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.035H-atom parameters constrained
wR(F2) = 0.132  w = 1/[σ2(Fo2) + (0.066P)2 + 2.0808P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
4166 reflectionsΔρmax = 0.56 e Å3
298 parametersΔρmin = −0.46 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Sn10.03995 (3)0.25533 (2)0.90574 (3)0.04317 (17)
N10.0859 (4)0.2891 (3)1.0739 (3)0.0440 (11)
N20.1584 (4)0.3005 (4)1.2707 (4)0.0611 (13)
N3−0.1259 (4)0.2163 (3)0.9852 (3)0.0473 (11)
N4−0.3408 (5)0.1915 (4)1.0421 (5)0.0788 (17)
O10.0994 (3)0.1346 (2)0.9701 (3)0.0517 (10)
O20.1706 (4)0.0621 (3)1.1024 (4)0.0853 (15)
O3−0.0532 (3)0.3752 (2)0.9163 (3)0.0545 (10)
O4−0.2151 (4)0.4402 (3)0.9433 (4)0.0946 (16)
C10.1354 (5)0.1303 (4)1.0620 (5)0.0557 (15)
C20.1298 (5)0.2175 (4)1.1213 (4)0.0450 (13)
C30.1662 (5)0.2249 (4)1.2196 (5)0.0556 (15)
H30.19760.17401.25090.067*
C40.1149 (5)0.3732 (4)1.2234 (4)0.0541 (15)
C50.0804 (5)0.3667 (4)1.1242 (4)0.0488 (14)
H50.05250.41841.09180.059*
C60.1053 (6)0.4589 (4)1.2806 (5)0.082 (2)
H6A0.13370.44961.34760.122*
H6B0.02860.47671.28200.122*
H6C0.14740.50601.24940.122*
C7−0.1548 (5)0.3744 (4)0.9450 (5)0.0570 (16)
C8−0.1966 (5)0.2842 (4)0.9824 (4)0.0513 (14)
C9−0.3049 (6)0.2725 (5)1.0106 (6)0.075 (2)
H9−0.35370.32171.00780.090*
C10−0.2715 (6)0.1230 (5)1.0447 (5)0.0649 (18)
C11−0.1606 (5)0.1348 (4)1.0159 (4)0.0536 (15)
H11−0.11170.08571.01830.064*
C12−0.3116 (6)0.0326 (5)1.0790 (6)0.091 (2)
H12A−0.38850.03711.09530.136*
H12B−0.26850.01381.13690.136*
H12C−0.3037−0.01151.02670.136*
C13−0.0319 (4)0.1966 (4)0.7745 (4)0.0469 (13)
C14−0.0653 (5)0.1070 (4)0.7688 (5)0.0665 (17)
H14−0.05840.07040.82530.080*
C15−0.1086 (6)0.0704 (5)0.6821 (6)0.080 (2)
H15−0.12980.00940.68010.096*
C16−0.1207 (6)0.1231 (7)0.5990 (6)0.088 (2)
H16−0.15140.09830.54050.105*
C17−0.0877 (6)0.2125 (7)0.6012 (5)0.083 (2)
H17−0.09530.24870.54440.100*
C18−0.0427 (5)0.2482 (4)0.6896 (5)0.0645 (18)
H18−0.01940.30870.69110.077*
C190.1901 (5)0.3181 (4)0.8612 (4)0.0556 (15)
C200.2684 (7)0.2621 (5)0.8185 (7)0.084 (2)
H200.25410.19980.81420.101*
C210.3653 (7)0.2945 (8)0.7828 (7)0.111 (3)
H210.41560.25570.75290.134*
C220.3867 (8)0.3866 (7)0.7921 (6)0.104 (2)
H220.45370.40960.77010.124*
C230.3137 (7)0.4438 (6)0.8320 (6)0.090 (2)
H230.32860.50600.83650.108*
C240.2133 (6)0.4077 (5)0.8671 (5)0.0750 (19)
H240.16200.44690.89500.090*
U11U22U33U12U13U23
Sn10.0388 (2)0.0483 (3)0.0423 (2)0.00011 (17)−0.00113 (16)0.00171 (17)
N10.040 (3)0.046 (2)0.046 (3)−0.006 (2)0.001 (2)0.003 (2)
N20.058 (3)0.075 (4)0.050 (3)−0.005 (3)−0.006 (2)0.004 (3)
N30.045 (3)0.049 (3)0.048 (3)0.000 (2)−0.001 (2)−0.003 (2)
N40.068 (4)0.081 (4)0.090 (4)0.002 (3)0.025 (3)−0.005 (3)
O10.054 (2)0.047 (2)0.055 (2)0.0109 (17)−0.0018 (19)−0.0026 (17)
O20.121 (4)0.052 (3)0.081 (3)0.018 (3)−0.015 (3)0.012 (2)
O30.058 (3)0.046 (2)0.059 (2)0.0037 (18)−0.009 (2)0.0066 (17)
O40.080 (4)0.067 (3)0.136 (5)0.030 (3)0.001 (3)0.006 (3)
C10.051 (4)0.053 (4)0.063 (4)0.004 (3)−0.005 (3)0.011 (3)
C20.044 (3)0.049 (3)0.042 (3)−0.003 (3)0.002 (3)0.006 (3)
C30.051 (4)0.063 (4)0.052 (4)0.000 (3)−0.006 (3)0.011 (3)
C40.053 (4)0.063 (4)0.046 (3)−0.008 (3)−0.003 (3)−0.006 (3)
C50.044 (3)0.048 (3)0.053 (3)−0.004 (2)−0.001 (3)0.000 (3)
C60.096 (6)0.081 (5)0.068 (5)−0.004 (4)−0.004 (4)−0.023 (4)
C70.053 (4)0.057 (4)0.061 (4)0.015 (3)−0.005 (3)−0.003 (3)
C80.044 (4)0.059 (3)0.051 (3)0.007 (3)0.004 (3)−0.015 (3)
C90.060 (5)0.080 (5)0.085 (5)0.023 (4)0.008 (4)−0.003 (4)
C100.064 (5)0.075 (5)0.057 (4)−0.014 (4)0.018 (3)−0.013 (3)
C110.054 (4)0.053 (4)0.055 (4)−0.003 (3)0.009 (3)−0.005 (3)
C120.087 (6)0.098 (6)0.090 (6)−0.033 (4)0.032 (4)0.002 (4)
C130.039 (3)0.057 (4)0.045 (3)−0.005 (3)−0.001 (3)−0.003 (3)
C140.065 (4)0.065 (4)0.069 (4)−0.005 (3)−0.015 (3)−0.007 (3)
C150.074 (5)0.071 (5)0.095 (6)−0.006 (4)−0.017 (4)−0.027 (4)
C160.059 (5)0.132 (8)0.072 (5)−0.004 (5)−0.004 (4)−0.036 (5)
C170.062 (5)0.143 (7)0.044 (4)−0.010 (5)−0.001 (3)0.004 (4)
C180.051 (4)0.095 (5)0.047 (4)−0.015 (3)0.002 (3)0.006 (3)
C190.051 (3)0.066 (4)0.050 (3)−0.007 (3)−0.001 (3)0.001 (3)
C200.069 (5)0.089 (5)0.095 (5)−0.006 (4)0.026 (4)0.003 (4)
C210.077 (5)0.147 (6)0.112 (6)−0.008 (5)0.042 (4)−0.001 (5)
C220.082 (5)0.130 (6)0.099 (5)−0.030 (5)0.015 (4)0.003 (5)
C230.097 (5)0.096 (5)0.077 (5)−0.038 (4)0.006 (4)0.002 (4)
C240.073 (4)0.089 (5)0.063 (4)−0.023 (4)0.003 (3)0.007 (3)
Sn1—O12.086 (4)C9—H90.9300
Sn1—O32.091 (4)C10—C111.411 (8)
Sn1—C132.117 (5)C10—C121.488 (9)
Sn1—C192.130 (6)C11—H110.9300
Sn1—N12.357 (4)C12—H12A0.9600
Sn1—N32.363 (5)C12—H12B0.9600
N1—C51.324 (7)C12—H12C0.9600
N1—C21.328 (7)C13—C181.370 (8)
N2—C31.308 (8)C13—C141.375 (8)
N2—C41.338 (7)C14—C151.368 (9)
N3—C81.309 (7)C14—H140.9300
N3—C111.335 (7)C15—C161.360 (10)
N4—C101.305 (8)C15—H150.9300
N4—C91.336 (9)C16—C171.370 (10)
O1—C11.294 (7)C16—H160.9300
O2—C11.207 (6)C17—C181.389 (10)
O3—C71.292 (7)C17—H170.9300
O4—C71.207 (7)C18—H180.9300
C1—C21.508 (8)C19—C241.344 (9)
C2—C31.379 (8)C19—C201.387 (9)
C3—H30.9300C20—C211.361 (11)
C4—C51.384 (7)C20—H200.9300
C4—C61.477 (8)C21—C221.380 (12)
C5—H50.9300C21—H210.9300
C6—H6A0.9600C22—C231.339 (11)
C6—H6B0.9600C22—H220.9300
C6—H6C0.9600C23—C241.413 (9)
C7—C81.506 (9)C23—H230.9300
C8—C91.379 (9)C24—H240.9300
O1—Sn1—O3149.56 (15)N4—C9—C8121.0 (6)
O1—Sn1—C1397.14 (18)N4—C9—H9119.5
O3—Sn1—C13101.11 (18)C8—C9—H9119.5
O1—Sn1—C19101.5 (2)N4—C10—C11120.5 (6)
O3—Sn1—C1996.7 (2)N4—C10—C12118.7 (6)
C13—Sn1—C19105.6 (2)C11—C10—C12120.8 (6)
O1—Sn1—N173.49 (15)N3—C11—C10120.2 (6)
O3—Sn1—N182.40 (15)N3—C11—H11119.9
C13—Sn1—N1163.15 (18)C10—C11—H11119.9
C19—Sn1—N190.17 (18)C10—C12—H12A109.5
O1—Sn1—N383.74 (16)C10—C12—H12B109.5
O3—Sn1—N373.16 (16)H12A—C12—H12B109.5
C13—Sn1—N387.08 (18)C10—C12—H12C109.5
C19—Sn1—N3165.3 (2)H12A—C12—H12C109.5
N1—Sn1—N378.12 (15)H12B—C12—H12C109.5
C5—N1—C2117.4 (5)C18—C13—C14117.5 (6)
C5—N1—Sn1130.8 (4)C18—C13—Sn1119.5 (4)
C2—N1—Sn1111.6 (4)C14—C13—Sn1123.0 (4)
C3—N2—C4117.5 (5)C15—C14—C13121.7 (7)
C8—N3—C11118.7 (5)C15—C14—H14119.2
C8—N3—Sn1111.1 (4)C13—C14—H14119.2
C11—N3—Sn1129.3 (4)C16—C15—C14120.1 (7)
C10—N4—C9118.7 (6)C16—C15—H15119.9
C1—O1—Sn1122.3 (3)C14—C15—H15119.9
C7—O3—Sn1121.8 (3)C15—C16—C17120.2 (7)
O2—C1—O1124.7 (6)C15—C16—H16119.9
O2—C1—C2119.0 (6)C17—C16—H16119.9
O1—C1—C2116.2 (5)C16—C17—C18118.9 (7)
N1—C2—C3120.2 (5)C16—C17—H17120.5
N1—C2—C1116.2 (5)C18—C17—H17120.5
C3—C2—C1123.5 (5)C13—C18—C17121.7 (7)
N2—C3—C2122.7 (6)C13—C18—H18119.2
N2—C3—H3118.6C17—C18—H18119.2
C2—C3—H3118.6C24—C19—C20117.4 (6)
N2—C4—C5120.0 (5)C24—C19—Sn1125.6 (5)
N2—C4—C6117.9 (5)C20—C19—Sn1116.9 (5)
C5—C4—C6122.1 (6)C21—C20—C19122.6 (8)
N1—C5—C4122.0 (5)C21—C20—H20118.7
N1—C5—H5119.0C19—C20—H20118.7
C4—C5—H5119.0C20—C21—C22118.0 (9)
C4—C6—H6A109.5C20—C21—H21121.0
C4—C6—H6B109.5C22—C21—H21121.0
H6A—C6—H6B109.5C23—C22—C21121.8 (9)
C4—C6—H6C109.5C23—C22—H22119.1
H6A—C6—H6C109.5C21—C22—H22119.1
H6B—C6—H6C109.5C22—C23—C24118.5 (8)
O4—C7—O3124.2 (6)C22—C23—H23120.7
O4—C7—C8120.0 (6)C24—C23—H23120.7
O3—C7—C8115.9 (5)C19—C24—C23121.6 (7)
N3—C8—C9121.1 (6)C19—C24—H24119.2
N3—C8—C7116.9 (5)C23—C24—H24119.2
C9—C8—C7122.0 (6)
D—H···AD—HH···AD···AD—H···A
C12—H12C···O2i0.962.513.315 (3)142
C14—H14···O2i0.932.573.298 (3)135
Sn1—O12.086 (4)
Sn1—O32.091 (4)
Sn1—C132.117 (5)
Sn1—C192.130 (6)
Sn1—N12.357 (4)
Sn1—N32.363 (5)
O1—Sn1—O3149.56 (15)
O1—Sn1—C1397.14 (18)
O3—Sn1—C13101.11 (18)
O1—Sn1—C19101.5 (2)
O3—Sn1—C1996.7 (2)
C13—Sn1—C19105.6 (2)
O1—Sn1—N173.49 (15)
O3—Sn1—N182.40 (15)
C13—Sn1—N1163.15 (18)
C19—Sn1—N190.17 (18)
O1—Sn1—N383.74 (16)
O3—Sn1—N373.16 (16)
C13—Sn1—N387.08 (18)
C19—Sn1—N3165.3 (2)
N1—Sn1—N378.12 (15)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C12—H12C⋯O2i0.962.513.315 (3)142
C14—H14⋯O2i0.932.573.298 (3)135

Symmetry code: (i) .

  2 in total

1.  Self-assembly of diorganotin(IV) moieties and 2-pyrazinecarboxylic acid: syntheses, characterizations and crystal structures of monomeric, polymeric or trinuclear macrocyclic compounds.

Authors:  Chunlin Ma; Yinfeng Han; Rufen Zhang; Daqi Wang
Journal:  Dalton Trans       Date:  2004-05-13       Impact factor: 4.390

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  2 in total

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