Literature DB >> 21202738

A new polymorph of magnesium oxalate dihydrate.

Xue-An Chen, Fang-Ping Song, Xin-An Chang, He-Gui Zang, Wei-Qiang Xiao.   

Abstract

In the asymmetric unit of the title compound, catena-poly[[diaqua-magnesium(II)]-μ-oxalato], [Mg(C(2)O(4))(H(2)O)(2)](n), there is one Mg atom in an octa-hedral coordination with site symmetry 222, a unique C atom of the oxalate anion lying on a twofold axis, an O atom of the anion in a general position and a water O atom at a site with imposed twofold rotation symmetry. The Mg(2+) ions are ligated by water mol-ecules and bridged by the anions to form chains that are held together by O-H⋯O hydrogen bonds. The structure of the title compound has already been reported in a different space group [Lagier, Pezerat & Dubernat (1969 ▶). Rev. Chim. Miner.6, 1081-1093; Levy, Perrotey & Visser (1971 ▶). Bull. Soc. Chim. Fr. pp. 757-761].

Entities:  

Year:  2008        PMID: 21202738      PMCID: PMC2961852          DOI: 10.1107/S1600536808015870

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Basso et al. (1997 ▶); Caric (1959 ▶); Deyrieux et al. (1973 ▶); Echigo et al. (2005 ▶); Huang & Mak (1990 ▶); Lagier et al. (1969 ▶); Le Page (1987 ▶); Lethbridge et al. (2003 ▶); Levy et al. (1971 ▶); Neder et al. (1997 ▶); Schefer & Grube (1995 ▶); Tazzoli & Domeneghetti (1980 ▶); Vanhoyland, Bouree et al. (2001 ▶); Vanhoyland, Van Bael et al. (2001 ▶).

Experimental

Crystal data

[Mg(C2O4)(H2O)2] M = 148.36 Orthorhombic, a = 5.3940 (11) Å b = 12.691 (3) Å c = 15.399 (3) Å V = 1054.1 (4) Å3 Z = 8 Mo Kα radiation μ = 0.29 mm−1 T = 290 K 0.30 × 0.20 × 0.15 mm

Data collection

Rigaku AFC-7R diffractometer Absorption correction: ψ scan (Kopfmann & Huber, 1968 ▶) T min = 0.915, T max = 0.962 1110 measured reflections 483 independent reflections 321 reflections with I > 2σ(I) R int = 0.054 3 standard reflections every 150 reflections intensity decay: 1.1%

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.110 S = 0.97 483 reflections 27 parameters All H-atom parameters refined Δρmax = 0.89 e Å−3 Δρmin = −0.48 e Å−3 Data collection: Rigaku/AFC Diffractometer Control Software (Rigaku, 1994 ▶); cell refinement: Rigaku/AFC Diffractometer Control Software; data reduction: Rigaku/AFC Diffractometer Control Software; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ATOMS (Dowty, 1999 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808015870/pv2083sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808015870/pv2083Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mg(C2O4)(H2O)2]F000 = 608
Mr = 148.36Dx = 1.870 Mg m3
Orthorhombic, FdddMo Kα radiation λ = 0.71073 Å
Hall symbol: -F 2uv 2vwCell parameters from 25 reflections
a = 5.3940 (11) Åθ = 13.0–19.6º
b = 12.691 (3) ŵ = 0.29 mm1
c = 15.399 (3) ÅT = 290 K
V = 1054.1 (4) Å3Block, colourless
Z = 80.30 × 0.20 × 0.15 mm
Rigaku AFC-7R diffractometerRint = 0.054
Radiation source: fine-focus sealed tubeθmax = 32.5º
Monochromator: graphiteθmin = 4.2º
T = 290 Kh = 0→8
2θ/ω scansk = 0→19
Absorption correction: ψ scan(Kopfmann & Huber, 1968)l = 0→23
Tmin = 0.915, Tmax = 0.9623 standard reflections
1110 measured reflections every 150 reflections
483 independent reflections intensity decay: 1.1%
321 reflections with I > 2σ(I)
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034All H-atom parameters refined
wR(F2) = 0.110  w = 1/[σ2(Fo2) + (0.0683P)2] where P = (Fo2 + 2Fc2)/3
S = 0.97(Δ/σ)max < 0.001
483 reflectionsΔρmax = 0.89 e Å3
27 parametersΔρmin = −0.48 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mg10.37500.37500.37500.0163 (2)
C10.87500.37500.32406 (10)0.0153 (3)
O10.66783 (15)0.37630 (11)0.28779 (5)0.0202 (3)
O20.37500.53689 (11)0.37500.0343 (4)
H20.399 (6)0.578 (2)0.3335 (16)0.050 (7)*
U11U22U33U12U13U23
Mg10.0117 (4)0.0237 (4)0.0136 (4)0.0000.0000.000
C10.0149 (6)0.0199 (6)0.0110 (6)−0.0001 (8)0.0000.000
O10.0145 (4)0.0342 (5)0.0120 (4)0.0012 (4)−0.0014 (3)−0.0018 (4)
O20.0631 (11)0.0228 (7)0.0169 (6)0.0000.0086 (10)0.000
Mg1—O2i2.0546 (15)Mg1—O12.0734 (9)
Mg1—O22.0546 (15)C1—O11.2494 (11)
Mg1—O1i2.0734 (9)C1—O1iv1.2494 (11)
Mg1—O1ii2.0734 (9)C1—C1v1.569 (3)
Mg1—O1iii2.0734 (9)O2—H20.84 (3)
O2i—Mg1—O2180.0O2i—Mg1—O190.45 (4)
O2i—Mg1—O1i89.55 (4)O2—Mg1—O189.55 (4)
O2—Mg1—O1i90.45 (4)O1i—Mg1—O199.26 (5)
O2i—Mg1—O1ii89.55 (4)O1ii—Mg1—O180.75 (5)
O2—Mg1—O1ii90.45 (4)O1iii—Mg1—O1179.09 (8)
O1i—Mg1—O1ii179.09 (7)O1—C1—O1iv126.89 (14)
O2i—Mg1—O1iii90.45 (4)O1—C1—C1v116.56 (7)
O2—Mg1—O1iii89.55 (4)O1iv—C1—C1v116.56 (7)
O1i—Mg1—O1iii80.75 (5)C1—O1—Mg1113.06 (8)
O1ii—Mg1—O1iii99.26 (5)Mg1—O2—H2128.7 (19)
D—H···AD—HH···AD···AD—H···A
O2—H2···O1vi0.84 (3)1.97 (2)2.761 (1)158 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯O1i0.84 (3)1.97 (2)2.761 (1)158 (2)

Symmetry code: (i) .

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