Literature DB >> 21202737

Poly[bis-(N,N-dimethyl-formamide)tris-(μ(4)-trans-stilbene-4,4'-dicarboxyl-ato)-tricadmium(II)]: a two-dimensional network with an unusual 3 topology.

Dong-Heon Lee, Gyungse Park.   

Abstract

In the title compound, [Cd(3)(C(16)H(10)O(4))(3)(C(3)H(7)NO)(2)](n) or [n class="Chemical">Cd(3)(SDA)(3)(DMF)(2)](n) (H(2)SDA is trans-stilbene-4,4'-dicarboxylic acid and DMF is dimethyl-formamide), the linear dicarboxylate ligand forms a two-dimensionally layered metal-organic network with the relatively uncommon 3(6) topology. The structure reveals trinuclear secondary building units and has an octa-hedral geometry at a central metal ion (occupying a symmetry site) and tetra-hedral geometries at two surrounding symmetrically equivalent metal ions lying on a threefold axis. The six-connected planar trinuclear Cd(II) centers, Cd(3)(O(2)CR)(6), play a role as potential nodes in generation of the relatively uncommon 3(6) topology. The coordinated DMF unit is disordered around the threefold axis.

Entities:  

Year:  2008        PMID: 21202737      PMCID: PMC2961861          DOI: 10.1107/S1600536808016267

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Chi et al. (2006 ▶); Dincâ & Long (2005 ▶); Dybtsev et al. (2004 ▶); Eddaoudi et al. (2002 ▶); Edgar et al. (2001 ▶); Hawxwell et al. (2006 ▶); Hill et al. (2005 ▶); Luan et al. (2006 ▶); Park et al. (2006 ▶); Rosi et al. (2003 ▶); Saalfrank et al. (2001 ▶); Seo et al. (2000 ▶); Wang et al. (2006 ▶); Williams et al. (2005 ▶).

Experimental

Crystal data

[Cd3(C16H10O4)3(C3H7NO)2] M = 1282.11 Trigonal, a = 16.4881 (5) Å c = 16.7919 (10) Å V = 3953.4 (3) Å3 Z = 3 Mo Kα radiation μ = 1.27 mm−1 T = 223 (2) K 0.30 × 0.30 × 0.30 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.69, T max = 0.69 6604 measured reflections 2105 independent reflections 1782 reflections with I > 2σ(I) R int = 0.104

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.181 S = 1.18 2105 reflections 136 parameters 92 restraints H-atom parameters constrained Δρmax = 1.70 e Å−3 Δρmin = −1.53 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808016267/n class="CellLine">bg2189sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808016267/bg2189Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cd3(C16H10O4)3(C3H7N1O1)2]Z = 3
Mr = 1282.11F000 = 1914
Trigonal, R3Dx = 1.616 Mg m3
Hall symbol: -R 3Mo Kα radiation λ = 0.71073 Å
a = 16.4881 (5) ÅCell parameters from 6604 reflections
b = 16.4881 (5) Åθ = 1.9–28.4º
c = 16.7919 (10) ŵ = 1.27 mm1
α = 90ºT = 223 (2) K
β = 90ºCubic, colourless
γ = 120º0.30 × 0.30 × 0.30 mm
V = 3953.4 (3) Å3
Siemens SMART CCD diffractometer2105 independent reflections
Radiation source: fine-focus sealed tube1782 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.104
T = 223(2) Kθmax = 28.4º
ω scansθmin = 1.9º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −21→21
Tmin = 0.69, Tmax = 0.69k = −21→18
6604 measured reflectionsl = −21→22
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.057H-atom parameters constrained
wR(F2) = 0.181  w = 1/[σ2(Fo2) + (0.0995P)2 + 4.8382P] where P = (Fo2 + 2Fc2)/3
S = 1.18(Δ/σ)max = 0.001
2105 reflectionsΔρmax = 1.70 e Å3
136 parametersΔρmin = −1.53 e Å3
92 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Cd10.00001.00001.00000.0302 (2)
Cd20.00001.00000.79310 (3)0.0424 (2)
O10.1245 (2)1.0679 (2)0.9162 (2)0.0521 (7)
O20.1222 (2)1.1401 (2)0.8067 (2)0.0599 (9)
C10.1562 (3)1.1402 (3)0.8740 (3)0.0458 (9)
C20.2391 (3)1.2283 (3)0.9015 (3)0.0579 (12)
C30.2624 (5)1.3134 (4)0.8665 (4)0.0748 (17)
H3A0.22591.31420.82380.090*
C40.3368 (6)1.3965 (5)0.8918 (5)0.109 (3)
H4A0.34961.45310.86770.131*
C50.3911 (6)1.3967 (5)0.9510 (5)0.112 (3)
C60.4698 (8)1.4929 (7)0.9730 (7)0.138 (4)
H60.47481.54490.94560.166*
C70.3714 (7)1.3114 (7)0.9864 (6)0.133 (4)
H7A0.40951.31201.02830.159*
C80.2968 (5)1.2260 (5)0.9610 (4)0.099 (3)
H8A0.28591.16900.98310.118*
O1S0.00001.00000.6625 (11)0.186 (4)
N1S0.106 (2)1.082 (2)0.5571 (18)0.188 (5)0.33
C1S0.067 (4)1.086 (4)0.625 (2)0.190 (6)0.33
H1S0.08251.14360.64790.228*0.33
C2S0.136 (3)1.014 (3)0.547 (3)0.188 (5)0.33
H2S10.14260.99160.59850.282*0.33
H2S20.19581.04290.51940.282*0.33
H2S30.08990.96160.51560.282*0.33
C3S0.144 (3)1.160 (3)0.502 (2)0.190 (5)0.33
H3S10.09641.17710.49090.284*0.33
H3S20.16151.14200.45310.284*0.33
H3S30.19801.21290.52570.284*0.33
U11U22U33U12U13U23
Cd10.0307 (3)0.0307 (3)0.0291 (4)0.01536 (14)0.0000.000
Cd20.0414 (3)0.0414 (3)0.0443 (4)0.02070 (14)0.0000.000
O10.0407 (15)0.0402 (15)0.068 (2)0.0147 (13)0.0172 (14)0.0081 (13)
O20.0493 (17)0.061 (2)0.0463 (17)0.0106 (15)0.0029 (13)0.0043 (14)
C10.0361 (19)0.044 (2)0.047 (2)0.0117 (16)0.0112 (16)0.0003 (16)
C20.052 (3)0.048 (2)0.048 (2)0.006 (2)0.0016 (19)0.0048 (18)
C30.062 (3)0.047 (3)0.090 (4)0.008 (3)−0.004 (3)0.013 (3)
C40.093 (5)0.045 (3)0.134 (7)−0.006 (3)−0.026 (5)0.008 (4)
C50.108 (6)0.067 (4)0.091 (5)−0.008 (4)−0.016 (4)−0.006 (4)
C60.137 (8)0.095 (6)0.130 (8)0.018 (5)−0.037 (6)0.024 (5)
C70.113 (7)0.112 (7)0.094 (5)−0.003 (5)−0.057 (5)0.013 (5)
C80.090 (4)0.075 (4)0.075 (4)−0.001 (3)−0.032 (3)0.025 (3)
O1S0.192 (4)0.192 (4)0.174 (6)0.096 (2)0.0000.000
N1S0.186 (6)0.190 (6)0.181 (6)0.089 (4)0.000 (4)0.000 (4)
C1S0.192 (8)0.191 (7)0.178 (7)0.088 (6)−0.002 (5)−0.006 (5)
C2S0.186 (6)0.190 (6)0.183 (6)0.090 (4)−0.001 (4)0.001 (4)
C3S0.189 (6)0.190 (6)0.184 (6)0.090 (4)0.000 (4)0.001 (4)
Cd1—O1i2.269 (3)C5—C71.408 (13)
Cd1—O1ii2.269 (3)C5—C61.509 (12)
Cd1—O1iii2.269 (3)C6—C6vi1.279 (19)
Cd1—O12.269 (3)C6—H60.9400
Cd1—O1iv2.269 (3)C7—C81.395 (10)
Cd1—O1v2.269 (3)C7—H7A0.9400
Cd1—Cd2v3.4742 (5)C8—H8A0.9400
Cd1—Cd23.4742 (5)O1S—C1Siii1.43 (4)
Cd2—O22.189 (3)O1S—C1Si1.43 (4)
Cd2—O2iii2.189 (3)O1S—C1S1.43 (4)
Cd2—O2i2.189 (3)N1S—C1S1.323 (9)
Cd2—O1S2.193 (19)N1S—C3S1.445 (9)
O1—C11.255 (5)N1S—C2S1.448 (9)
O2—C11.262 (6)C1S—H1S0.9400
C1—C21.484 (6)C2S—H2S10.9700
C2—C31.386 (8)C2S—H2S20.9700
C2—C81.394 (8)C2S—H2S30.9700
C3—C41.373 (9)C3S—H3S10.9700
C3—H3A0.9400C3S—H3S20.9700
C4—C51.336 (12)C3S—H3S30.9700
C4—H4A0.9400
O1i—Cd1—O1ii180.00 (13)C3—C2—C1120.9 (5)
O1i—Cd1—O1iii85.62 (14)C8—C2—C1120.1 (5)
O1ii—Cd1—O1iii94.38 (14)C4—C3—C2122.4 (7)
O1i—Cd1—O185.62 (14)C4—C3—H3A118.8
O1ii—Cd1—O194.38 (14)C2—C3—H3A118.8
O1iii—Cd1—O185.62 (14)C5—C4—C3119.8 (7)
O1i—Cd1—O1iv94.38 (14)C5—C4—H4A120.1
O1ii—Cd1—O1iv85.62 (14)C3—C4—H4A120.1
O1iii—Cd1—O1iv180.000 (1)C4—C5—C7119.5 (6)
O1—Cd1—O1iv94.38 (14)C4—C5—C6114.1 (8)
O1i—Cd1—O1v94.38 (14)C7—C5—C6126.4 (8)
O1ii—Cd1—O1v85.62 (14)C6vi—C6—C5123.3 (13)
O1iii—Cd1—O1v94.38 (14)C6vi—C6—H6118.4
O1—Cd1—O1v180.000 (1)C5—C6—H6118.4
O1iv—Cd1—O1v85.62 (14)C8—C7—C5121.7 (7)
O1i—Cd1—Cd2v128.30 (9)C8—C7—H7A119.1
O1ii—Cd1—Cd2v51.70 (9)C5—C7—H7A119.1
O1iii—Cd1—Cd2v128.30 (9)C7—C8—C2117.4 (7)
O1—Cd1—Cd2v128.30 (9)C7—C8—H8A121.3
O1iv—Cd1—Cd2v51.70 (9)C2—C8—H8A121.3
O1v—Cd1—Cd2v51.70 (9)C1Siii—O1S—C1Si102 (3)
O1i—Cd1—Cd251.70 (9)C1Siii—O1S—C1S102 (3)
O1ii—Cd1—Cd2128.30 (9)C1Si—O1S—C1S102 (3)
O1iii—Cd1—Cd251.70 (9)C1Siii—O1S—Cd2116 (2)
O1—Cd1—Cd251.70 (9)C1Si—O1S—Cd2116 (2)
O1iv—Cd1—Cd2128.30 (9)C1S—O1S—Cd2116 (2)
O1v—Cd1—Cd2128.30 (9)C1S—N1S—C3S120.7 (11)
Cd2v—Cd1—Cd2180.0C1S—N1S—C2S120.1 (11)
O2—Cd2—O2iii118.93 (3)C3S—N1S—C2S116.8 (10)
O2—Cd2—O2i118.93 (3)N1S—C1S—O1S119 (4)
O2iii—Cd2—O2i118.93 (3)N1S—C1S—H1S120.4
O2—Cd2—O1S95.98 (9)O1S—C1S—H1S120.4
O2iii—Cd2—O1S95.98 (9)N1S—C2S—H2S1109.5
O2i—Cd2—O1S95.98 (9)N1S—C2S—H2S2109.5
O2—Cd2—Cd184.02 (9)H2S1—C2S—H2S2109.5
O2iii—Cd2—Cd184.02 (9)N1S—C2S—H2S3109.5
O2i—Cd2—Cd184.02 (9)H2S1—C2S—H2S3109.5
O1S—Cd2—Cd1180.000 (4)H2S2—C2S—H2S3109.5
C1—O1—Cd1131.5 (3)N1S—C3S—H3S1109.5
C1—O2—Cd2105.6 (3)N1S—C3S—H3S2109.5
O1—C1—O2122.1 (4)H3S1—C3S—H3S2109.5
O1—C1—C2119.8 (4)N1S—C3S—H3S3109.5
O2—C1—C2118.1 (4)H3S1—C3S—H3S3109.5
C3—C2—C8119.0 (5)H3S2—C3S—H3S3109.5
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