Literature DB >> 21202732

(5,5'-Dicarboxy-biphenyl-2,2'-dicarboxyl-ato-κO,O)bis-(1,10-phenanthroline-κN,N')zinc(II) dihydrate.

Rui-Zhan Chen, Fei-Jun Guo, Fan-Lei Meng.   

Abstract

In the title compound, [Zn(C(16)H(8)O(8))(C(12)H(8)N(2))(2)]·2H(2)O, the Zn(II) atom is located on a twofold rotation axis and is six-coordinated by two O atoms from a 5,5'-dicarboxy-biphenyl-2,2'-dicarboxyl-ate ligand and four N atoms from two 1,10-phenanthroline mol-ecules in a distorted octa-hedral geometry. The crystal structure involves O-H⋯O hydrogen bonds.

Entities:  

Year:  2008        PMID: 21202732      PMCID: PMC2961799          DOI: 10.1107/S1600536808015742

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Che et al. (2006 ▶); Chen et al. (2008 ▶); Lehn (1990 ▶); Zang et al. (2006 ▶).

Experimental

Crystal data

[Zn(C16H8O8)(C12H8N2)2]·2H2O M = 790.03 Monoclinic, a = 16.901 (5) Å b = 9.473 (3) Å c = 22.126 (7) Å β = 96.429 (5)° V = 3520.4 (19) Å3 Z = 4 Mo Kα radiation μ = 0.77 mm−1 T = 293 (2) K 0.26 × 0.22 × 0.20 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.817, T max = 0.853 9664 measured reflections 3487 independent reflections 2437 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.124 S = 1.04 3487 reflections 255 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808015742/hy2133sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808015742/hy2133Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C16H8O8)(C12H8N2)2]·2H2OF000 = 1624
Mr = 790.03Dx = 1.491 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 3487 reflections
a = 16.901 (5) Åθ = 2.0–26.0º
b = 9.473 (3) ŵ = 0.77 mm1
c = 22.126 (7) ÅT = 293 (2) K
β = 96.429 (5)ºBlock, colorless
V = 3520.4 (19) Å30.26 × 0.22 × 0.20 mm
Z = 4
Bruker SMART APEX CCD area-detector diffractometer3487 independent reflections
Radiation source: fine-focus sealed tube2437 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.049
T = 293(2) Kθmax = 26.2º
φ and ω scansθmin = 1.9º
Absorption correction: multi-scan(SADABS; Bruker, 2001)h = −20→18
Tmin = 0.817, Tmax = 0.853k = −11→11
9664 measured reflectionsl = −21→27
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.057H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.125  w = 1/[σ2(Fo2) + (0.0505P)2 + 0.8309P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
3487 reflectionsΔρmax = 0.31 e Å3
255 parametersΔρmin = −0.22 e Å3
2 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.3739 (2)0.3651 (5)0.63923 (18)0.0637 (11)
H10.35430.29580.66340.076*
C20.3354 (3)0.3873 (6)0.5804 (2)0.0880 (16)
H20.29130.33370.56560.106*
C30.3645 (3)0.4896 (6)0.5454 (2)0.0926 (17)
H30.33900.50770.50670.111*
C40.4311 (3)0.5664 (5)0.5667 (2)0.0762 (14)
C50.4663 (4)0.6727 (6)0.5317 (2)0.0988 (19)
H50.44240.69480.49290.119*
C60.5326 (4)0.7401 (6)0.5538 (3)0.106 (2)
H60.55420.80740.52980.127*
C70.5713 (3)0.7116 (4)0.6134 (2)0.0776 (14)
C80.6414 (4)0.7740 (5)0.6377 (3)0.098 (2)
H80.66590.84080.61520.117*
C90.6744 (3)0.7386 (5)0.6936 (3)0.0906 (17)
H90.72220.77930.70980.109*
C100.6361 (3)0.6400 (4)0.7274 (2)0.0722 (13)
H100.65930.61640.76610.087*
C110.5368 (3)0.6116 (4)0.6493 (2)0.0600 (11)
C120.4662 (3)0.5378 (4)0.62567 (18)0.0588 (11)
C130.40756 (18)0.1983 (3)0.81456 (14)0.0328 (7)
C140.47901 (16)0.1060 (3)0.82887 (12)0.0264 (7)
C150.51756 (16)0.0460 (3)0.78249 (12)0.0240 (6)
C160.58975 (17)−0.0230 (3)0.79802 (13)0.0299 (7)
H160.6169−0.06130.76760.036*
C170.62178 (18)−0.0353 (3)0.85843 (14)0.0335 (7)
C180.58141 (19)0.0192 (4)0.90393 (14)0.0421 (9)
H180.60210.00940.94450.051*
C190.51007 (18)0.0882 (3)0.88893 (13)0.0383 (8)
H190.48240.12350.91970.046*
C200.6999 (2)−0.1096 (4)0.87475 (16)0.0460 (9)
N10.43688 (18)0.4390 (3)0.66158 (13)0.0510 (8)
N20.5682 (2)0.5791 (3)0.70633 (15)0.0563 (8)
O10.40798 (12)0.2849 (2)0.77191 (9)0.0370 (5)
O20.35134 (14)0.1861 (3)0.84667 (11)0.0646 (8)
O1W0.33466 (18)0.0544 (3)0.95823 (12)0.0704 (8)
O30.73266 (15)−0.1494 (3)0.82746 (11)0.0707 (9)
H3A0.7749−0.18930.83840.106*
O40.72855 (15)−0.1289 (3)0.92612 (11)0.0786 (10)
Zn10.50000.41820 (6)0.75000.0430 (2)
H1B0.315 (2)0.112 (3)0.9823 (14)0.064*
H1A0.333 (2)0.110 (3)0.9282 (12)0.064*
U11U22U33U12U13U23
C10.053 (3)0.081 (3)0.058 (3)0.011 (2)0.009 (2)0.017 (2)
C20.054 (3)0.135 (5)0.074 (3)0.021 (3)0.002 (2)0.021 (3)
C30.085 (4)0.133 (5)0.061 (3)0.046 (4)0.016 (3)0.038 (3)
C40.092 (4)0.076 (3)0.065 (3)0.033 (3)0.030 (3)0.029 (3)
C50.145 (6)0.088 (4)0.072 (4)0.041 (4)0.049 (4)0.042 (3)
C60.168 (6)0.065 (4)0.097 (5)0.018 (4)0.071 (4)0.030 (3)
C70.116 (4)0.045 (3)0.084 (4)0.007 (3)0.065 (3)0.006 (2)
C80.151 (6)0.051 (3)0.109 (5)−0.032 (3)0.093 (4)−0.018 (3)
C90.113 (4)0.068 (3)0.104 (4)−0.040 (3)0.071 (4)−0.032 (3)
C100.093 (4)0.052 (2)0.081 (3)−0.023 (2)0.047 (3)−0.020 (2)
C110.083 (3)0.035 (2)0.070 (3)0.007 (2)0.044 (2)−0.0001 (19)
C120.076 (3)0.051 (2)0.056 (3)0.027 (2)0.033 (2)0.0180 (19)
C130.0281 (18)0.0396 (18)0.0312 (18)0.0106 (14)0.0054 (14)0.0015 (15)
C140.0225 (16)0.0314 (17)0.0255 (16)0.0040 (12)0.0037 (12)−0.0001 (12)
C150.0231 (16)0.0238 (15)0.0253 (16)0.0002 (11)0.0036 (12)0.0000 (11)
C160.0247 (17)0.0352 (17)0.0304 (18)0.0077 (13)0.0056 (13)−0.0018 (13)
C170.0262 (18)0.0431 (18)0.0310 (18)0.0093 (14)0.0018 (13)0.0017 (14)
C180.039 (2)0.063 (2)0.0236 (18)0.0165 (17)0.0000 (14)−0.0008 (16)
C190.0358 (19)0.054 (2)0.0266 (17)0.0185 (16)0.0097 (14)−0.0025 (15)
C200.033 (2)0.070 (3)0.035 (2)0.0191 (17)0.0034 (16)0.0049 (17)
N10.051 (2)0.0519 (19)0.052 (2)0.0120 (16)0.0165 (15)0.0146 (15)
N20.072 (2)0.0382 (17)0.066 (2)−0.0056 (17)0.0362 (18)−0.0067 (16)
O10.0319 (13)0.0374 (12)0.0422 (13)0.0101 (10)0.0063 (10)0.0116 (10)
O20.0449 (16)0.098 (2)0.0564 (17)0.0427 (15)0.0294 (12)0.0411 (15)
O1W0.079 (2)0.088 (2)0.0457 (19)0.0195 (17)0.0126 (15)0.0143 (15)
O30.0530 (17)0.121 (2)0.0388 (15)0.0559 (17)0.0072 (12)0.0098 (15)
O40.0610 (19)0.133 (3)0.0394 (16)0.0561 (18)−0.0040 (13)0.0029 (16)
Zn10.0470 (4)0.0373 (3)0.0467 (4)0.0000.0144 (3)0.000
C1—N11.323 (5)C13—O21.254 (4)
C1—C21.405 (6)C13—C141.496 (4)
C1—H10.9300C14—C191.383 (4)
C2—C31.366 (7)C14—C151.396 (4)
C2—H20.9300C15—C161.393 (4)
C3—C41.378 (7)C15—C15i1.493 (5)
C3—H30.9300C16—C171.390 (4)
C4—C121.399 (6)C16—H160.9300
C4—C51.439 (7)C17—C181.378 (4)
C5—C61.334 (7)C17—C201.504 (4)
C5—H50.9300C18—C191.379 (4)
C6—C71.431 (7)C18—H180.9300
C6—H60.9300C19—H190.9300
C7—C81.378 (7)C20—O41.198 (4)
C7—C111.404 (5)C20—O31.294 (4)
C8—C91.341 (7)N1—Zn12.130 (3)
C8—H80.9300N2—Zn12.199 (3)
C9—C101.399 (6)O1—Zn12.102 (2)
C9—H90.9300O1W—H1B0.86 (3)
C10—N21.321 (5)O1W—H1A0.85 (3)
C10—H100.9300O3—H3A0.8200
C11—N21.348 (5)Zn1—O12.102 (2)
C11—C121.431 (6)Zn1—N12.130 (3)
C12—N11.357 (4)Zn1—N22.199 (3)
C13—O11.251 (3)
N1—C1—C2122.5 (4)C16—C15—C14118.5 (3)
N1—C1—H1118.8C16—C15—C15i118.7 (3)
C2—C1—H1118.8C14—C15—C15i122.7 (3)
C3—C2—C1118.2 (5)C17—C16—C15120.9 (3)
C3—C2—H2120.9C17—C16—H16119.6
C1—C2—H2120.9C15—C16—H16119.6
C2—C3—C4120.8 (5)C18—C17—C16120.0 (3)
C2—C3—H3119.6C18—C17—C20119.5 (3)
C4—C3—H3119.6C16—C17—C20120.5 (3)
C3—C4—C12117.5 (4)C17—C18—C19119.5 (3)
C3—C4—C5123.8 (5)C17—C18—H18120.2
C12—C4—C5118.7 (5)C19—C18—H18120.2
C6—C5—C4121.3 (5)C18—C19—C14121.1 (3)
C6—C5—H5119.4C18—C19—H19119.5
C4—C5—H5119.4C14—C19—H19119.5
C5—C6—C7121.7 (5)O4—C20—O3124.0 (3)
C5—C6—H6119.1O4—C20—C17123.3 (3)
C7—C6—H6119.1O3—C20—C17112.7 (3)
C8—C7—C11117.4 (5)C1—N1—C12118.5 (4)
C8—C7—C6124.2 (5)C1—N1—Zn1126.4 (3)
C11—C7—C6118.3 (5)C12—N1—Zn1115.1 (3)
C9—C8—C7120.2 (5)C10—N2—C11117.7 (4)
C9—C8—H8119.9C10—N2—Zn1128.7 (3)
C7—C8—H8119.9C11—N2—Zn1113.5 (3)
C8—C9—C10119.3 (5)C13—O1—Zn1129.41 (19)
C8—C9—H9120.3H1B—O1W—H1A96 (4)
C10—C9—H9120.3C20—O3—H3A109.5
N2—C10—C9122.6 (5)O1—Zn1—O1i106.16 (11)
N2—C10—H10118.7O1—Zn1—N1i98.70 (10)
C9—C10—H10118.7O1i—Zn1—N1i87.72 (10)
N2—C11—C7122.7 (5)O1—Zn1—N187.72 (10)
N2—C11—C12117.1 (3)O1i—Zn1—N198.70 (10)
C7—C11—C12120.2 (5)N1i—Zn1—N1169.36 (16)
N1—C12—C4122.4 (4)O1—Zn1—N2162.88 (11)
N1—C12—C11117.8 (4)O1i—Zn1—N282.94 (10)
C4—C12—C11119.7 (4)N1i—Zn1—N296.08 (12)
O1—C13—O2123.8 (3)N1—Zn1—N276.44 (13)
O1—C13—C14118.1 (3)O1—Zn1—N2i82.94 (10)
O2—C13—C14118.1 (3)O1i—Zn1—N2i162.88 (11)
C19—C14—C15119.9 (3)N1i—Zn1—N2i76.44 (13)
C19—C14—C13119.0 (3)N1—Zn1—N2i96.08 (12)
C15—C14—C13121.0 (2)N2—Zn1—N2i92.23 (15)
N1—C1—C2—C3−0.2 (7)C16—C17—C20—O4−176.6 (4)
C1—C2—C3—C41.7 (8)C18—C17—C20—O3−177.0 (3)
C2—C3—C4—C12−1.5 (7)C16—C17—C20—O33.8 (5)
C2—C3—C4—C5178.1 (4)C2—C1—N1—C12−1.4 (6)
C3—C4—C5—C6−177.5 (5)C2—C1—N1—Zn1179.3 (3)
C12—C4—C5—C62.2 (8)C4—C12—N1—C11.6 (5)
C4—C5—C6—C7−0.8 (9)C11—C12—N1—C1−176.8 (3)
C5—C6—C7—C8177.4 (5)C4—C12—N1—Zn1−179.0 (3)
C5—C6—C7—C11−1.3 (8)C11—C12—N1—Zn12.6 (4)
C11—C7—C8—C90.1 (7)C9—C10—N2—C112.0 (6)
C6—C7—C8—C9−178.6 (5)C9—C10—N2—Zn1178.0 (3)
C7—C8—C9—C10−1.2 (7)C7—C11—N2—C10−3.2 (5)
C8—C9—C10—N20.2 (7)C12—C11—N2—C10175.9 (3)
C8—C7—C11—N22.2 (6)C7—C11—N2—Zn1−179.8 (3)
C6—C7—C11—N2−179.1 (4)C12—C11—N2—Zn1−0.8 (4)
C8—C7—C11—C12−176.9 (4)O2—C13—O1—Zn1135.8 (3)
C6—C7—C11—C121.9 (6)C14—C13—O1—Zn1−42.9 (4)
C3—C4—C12—N1−0.2 (6)C13—O1—Zn1—O1i63.6 (2)
C5—C4—C12—N1−179.8 (4)C13—O1—Zn1—N1i−26.5 (3)
C3—C4—C12—C11178.2 (4)C13—O1—Zn1—N1162.0 (3)
C5—C4—C12—C11−1.5 (6)C13—O1—Zn1—N2−176.0 (3)
N2—C11—C12—N1−1.2 (5)C13—O1—Zn1—N2i−101.6 (3)
C7—C11—C12—N1177.9 (3)C1—N1—Zn1—O1−9.4 (3)
N2—C11—C12—C4−179.6 (3)C12—N1—Zn1—O1171.3 (2)
C7—C11—C12—C4−0.5 (6)C1—N1—Zn1—O1i96.6 (3)
O1—C13—C14—C19134.7 (3)C12—N1—Zn1—O1i−82.7 (2)
O2—C13—C14—C19−44.2 (4)C1—N1—Zn1—N1i−136.8 (3)
O1—C13—C14—C15−40.9 (4)C12—N1—Zn1—N1i43.9 (2)
O2—C13—C14—C15140.3 (3)C1—N1—Zn1—N2177.1 (3)
C19—C14—C15—C16−4.1 (4)C12—N1—Zn1—N2−2.2 (2)
C13—C14—C15—C16171.4 (3)C1—N1—Zn1—N2i−92.1 (3)
C19—C14—C15—C15i172.4 (2)C12—N1—Zn1—N2i88.6 (2)
C13—C14—C15—C15i−12.1 (4)C10—N2—Zn1—O1162.7 (3)
C14—C15—C16—C171.7 (4)C11—N2—Zn1—O1−21.1 (5)
C15i—C15—C16—C17−175.0 (2)C10—N2—Zn1—O1i−73.9 (3)
C15—C16—C17—C181.1 (5)C11—N2—Zn1—O1i102.3 (2)
C15—C16—C17—C20−179.8 (3)C10—N2—Zn1—N1i13.1 (3)
C16—C17—C18—C19−1.3 (5)C11—N2—Zn1—N1i−170.7 (2)
C20—C17—C18—C19179.5 (3)C10—N2—Zn1—N1−174.6 (3)
C17—C18—C19—C14−1.1 (5)C11—N2—Zn1—N11.6 (2)
C15—C14—C19—C183.9 (5)C10—N2—Zn1—N2i89.7 (3)
C13—C14—C19—C18−171.7 (3)C11—N2—Zn1—N2i−94.1 (3)
C18—C17—C20—O42.6 (6)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O2ii0.821.742.538 (3)162
O1W—H1B···O4iii0.86 (3)2.24 (2)2.966 (4)143 (3)
O1W—H1A···O20.85 (3)2.00 (2)2.808 (4)159 (4)
Zn1—O12.102 (2)
Zn1—N12.130 (3)
Zn1—N22.199 (3)
O1—Zn1—O1i106.16 (11)
O1—Zn1—N1i98.70 (10)
O1—Zn1—N187.72 (10)
N1i—Zn1—N1169.36 (16)
O1—Zn1—N2162.88 (11)
N1—Zn1—N276.44 (13)
O1—Zn1—N2i82.94 (10)
N1—Zn1—N2i96.08 (12)
N2—Zn1—N2i92.23 (15)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3A⋯O2ii0.821.742.538 (3)162
O1W—H1B⋯O4iii0.86 (3)2.24 (2)2.966 (4)143 (3)
O1W—H1A⋯O20.85 (3)2.00 (2)2.808 (4)159 (4)

Symmetry codes: (ii) ; (iii) .

  3 in total

1.  Assemblies of a new flexible multicarboxylate ligand and d10 metal centers toward the construction of homochiral helical coordination polymers: structures, luminescence, and NLO-active properties.

Authors:  Shuangquan Zang; Yang Su; Yizhi Li; Zhaoping Ni; Qingjin Meng
Journal:  Inorg Chem       Date:  2006-01-09       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  (5,5'-Dicarboxy-biphenyl-2,2'-dicarboxyl-ato-κO,O)bis-(1,10-phenanthroline-κN,N')cobalt(II) dihydrate.

Authors:  Ruizhan Chen; Feijun Guo; Fanlei Meng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-03
  3 in total

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