Literature DB >> 21202665

1-Furfuryl-3-furoylthio-urea.

O Estévez-Hernández, J Duque, J Ellena, Rodrigo S Corrêa.   

Abstract

The title compound, C(11)H(10)N(2)O(3)S, was synthesized from furoyl isothio-cyanate and furfurylamine in dry acetone. The thio-urea group is in the thio-amide form. The trans-cis geometry of the thio-urea group is stabilized by intra-molecular hydrogen bonding between the carbonyl and cis-thio-amide and results in a pseudo-S(6) planar ring which makes dihedral angles of 2.5 (3) and 88.1 (2)° with the furoyl and furfuryl groups, respectively. There is also an intra-molecular hydrogen bond between the furan O atom and the other thio-amide H atom. In the crystal structure, mol-ecules are linked by two inter-molecular N-H⋯O hydrogen bonds, forming dimers. These dimers are stacked within the crystal structure along the [010] direction.

Entities:  

Year:  2008        PMID: 21202665      PMCID: PMC2961436          DOI: 10.1107/S1600536808015250

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Dhooghe et al. (2005 ▶); Aly et al. (2007 ▶); Estévez-Hernández et al. (2007 ▶). For related structures, see: Koch (2001 ▶); Yamin & Hassan (2004 ▶). For the synthesis, see: Otazo et al. (2001 ▶).

Experimental

Crystal data

C11H10N2O3S M = 250.27 Triclinic, a = 4.5999 (2) Å b = 11.3792 (6) Å c = 12.0556 (5) Å α = 68.351 (3)° β = 83.187 (4)° γ = 89.367 (3)° V = 582.01 (5) Å3 Z = 2 Mo Kα radiation μ = 0.28 mm−1 T = 294 K 0.16 × 0.15 × 0.08 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: none 4433 measured reflections 2427 independent reflections 1753 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.135 S = 1.05 2427 reflections 154 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.28 e Å−3 Data collection: COLLECT (Enraf–Nonius, 2000 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO (Otwinowski & Minor, 1997 ▶) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808015250/xu2426sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808015250/xu2426Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H10N2O3SZ = 2
Mr = 250.27F000 = 260
Triclinic, P1Dx = 1.428 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 4.5999 (2) ÅCell parameters from 2356 reflections
b = 11.3792 (6) Åθ = 2.9–26.7º
c = 12.0556 (5) ŵ = 0.28 mm1
α = 68.351 (3)ºT = 294 K
β = 83.187 (4)ºPrism, colourless
γ = 89.367 (3)º0.16 × 0.15 × 0.08 mm
V = 582.01 (5) Å3
Nonius KappaCCD diffractometerRint = 0.028
ω scansθmax = 26.6º
Absorption correction: noneθmin = 3.1º
4433 measured reflectionsh = −5→5
2427 independent reflectionsk = −14→14
1753 reflections with I > 2σ(I)l = −15→13
Refinement on F2H-atom parameters constrained
Least-squares matrix: full  w = 1/[σ2(Fo2) + (0.0698P)2 + 0.1199P] where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.048(Δ/σ)max < 0.001
wR(F2) = 0.135Δρmax = 0.32 e Å3
S = 1.05Δρmin = −0.28 e Å3
2427 reflectionsExtinction correction: none
154 parameters
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
S1−0.16463 (15)0.45844 (5)0.35901 (6)0.0578 (2)
O10.1719 (4)0.07028 (14)0.56626 (15)0.0540 (4)
O20.4479 (4)0.28509 (15)0.68097 (15)0.0565 (4)
N2−0.1523 (4)0.21274 (16)0.39894 (15)0.0417 (4)
H2−0.09110.1390.43810.05*
O30.0164 (5)0.1731 (2)0.16872 (17)0.0793 (6)
N10.1109 (4)0.28290 (16)0.51574 (15)0.0421 (4)
H10.16010.34610.53320.05*
C8−0.1860 (5)0.2555 (2)0.1856 (2)0.0476 (5)
C7−0.3440 (5)0.2252 (2)0.30733 (19)0.0461 (5)
H7A−0.48090.29110.30540.055*
H7B−0.45670.14650.32990.055*
C30.3974 (5)0.17197 (19)0.67285 (18)0.0415 (5)
C10.2185 (5)0.16912 (19)0.58107 (18)0.0411 (5)
C2−0.0679 (5)0.30996 (19)0.42464 (18)0.0396 (5)
C40.5302 (6)0.0818 (2)0.7549 (2)0.0606 (7)
H40.5303−0.0040.76760.073*
C9−0.2028 (7)0.3500 (3)0.0816 (3)0.0771 (9)
H9−0.32190.41930.0680.092*
C60.6146 (6)0.2632 (3)0.7713 (2)0.0611 (7)
H60.68060.3250.79660.073*
C50.6702 (6)0.1424 (3)0.8184 (2)0.0607 (7)
H50.78050.10430.88140.073*
C100.0005 (8)0.3236 (4)−0.0059 (3)0.0850 (10)
H100.03660.3725−0.08750.102*
C110.1238 (8)0.2192 (4)0.0502 (3)0.0893 (10)
H110.26570.18110.01440.107*
U11U22U33U12U13U23
S10.0793 (5)0.0362 (3)0.0594 (4)0.0082 (3)−0.0299 (3)−0.0131 (3)
O10.0709 (11)0.0387 (8)0.0580 (10)0.0093 (7)−0.0252 (8)−0.0195 (7)
O20.0688 (11)0.0463 (9)0.0608 (10)0.0043 (8)−0.0235 (8)−0.0225 (8)
N20.0499 (10)0.0363 (9)0.0390 (9)0.0019 (7)−0.0114 (8)−0.0122 (7)
O30.0938 (15)0.0759 (13)0.0589 (12)0.0162 (11)0.0080 (10)−0.0197 (10)
N10.0512 (10)0.0335 (8)0.0426 (9)0.0010 (7)−0.0137 (8)−0.0128 (7)
C80.0536 (13)0.0444 (12)0.0467 (12)−0.0013 (10)−0.0165 (10)−0.0158 (10)
C70.0458 (12)0.0479 (12)0.0472 (12)0.0008 (9)−0.0131 (10)−0.0185 (10)
C30.0437 (11)0.0406 (11)0.0420 (11)0.0019 (9)−0.0077 (9)−0.0167 (9)
C10.0428 (11)0.0400 (11)0.0384 (11)0.0012 (9)−0.0034 (9)−0.0125 (9)
C20.0413 (11)0.0399 (11)0.0350 (10)0.0013 (9)−0.0052 (8)−0.0107 (9)
C40.0782 (17)0.0469 (13)0.0612 (15)0.0147 (12)−0.0309 (13)−0.0189 (11)
C90.098 (2)0.0648 (17)0.0581 (17)−0.0002 (16)−0.0300 (16)−0.0041 (14)
C60.0649 (16)0.0689 (17)0.0599 (15)−0.0010 (13)−0.0212 (13)−0.0317 (13)
C50.0655 (16)0.0704 (17)0.0512 (14)0.0123 (13)−0.0272 (12)−0.0229 (12)
C100.102 (2)0.106 (3)0.0390 (15)−0.034 (2)−0.0080 (15)−0.0166 (16)
C110.108 (3)0.098 (3)0.0561 (19)−0.010 (2)0.0174 (18)−0.0309 (19)
S1—C21.661 (2)C7—H7A0.97
O1—C11.227 (2)C7—H7B0.97
O2—C31.351 (3)C3—C41.336 (3)
O2—C61.353 (3)C3—C11.465 (3)
N2—C21.327 (3)C4—C51.412 (4)
N2—C71.460 (3)C4—H40.93
N2—H20.86C9—C101.439 (5)
O3—C111.359 (3)C9—H90.93
O3—C81.366 (3)C6—C51.314 (4)
N1—C11.367 (3)C6—H60.93
N1—C21.392 (3)C5—H50.93
N1—H10.86C10—C111.294 (5)
C8—C91.327 (3)C10—H100.93
C8—C71.476 (3)C11—H110.93
C3—O2—C6106.57 (19)N1—C1—C3115.07 (18)
C2—N2—C7123.03 (18)N2—C2—N1116.40 (17)
C2—N2—H2118.5N2—C2—S1125.21 (16)
C7—N2—H2118.5N1—C2—S1118.38 (15)
C11—O3—C8107.1 (2)C3—C4—C5106.4 (2)
C1—N1—C2128.53 (18)C3—C4—H4126.8
C1—N1—H1115.7C5—C4—H4126.8
C2—N1—H1115.7C8—C9—C10106.1 (3)
C9—C8—O3109.2 (2)C8—C9—H9126.9
C9—C8—C7132.7 (3)C10—C9—H9126.9
O3—C8—C7118.09 (19)C5—C6—O2110.6 (2)
N2—C7—C8113.74 (18)C5—C6—H6124.7
N2—C7—H7A108.8O2—C6—H6124.7
C8—C7—H7A108.8C6—C5—C4106.7 (2)
N2—C7—H7B108.8C6—C5—H5126.6
C8—C7—H7B108.8C4—C5—H5126.6
H7A—C7—H7B107.7C11—C10—C9107.2 (3)
C4—C3—O2109.73 (19)C11—C10—H10126.4
C4—C3—C1132.6 (2)C9—C10—H10126.4
O2—C3—C1117.69 (18)C10—C11—O3110.3 (3)
O1—C1—N1123.86 (19)C10—C11—H11124.8
O1—C1—C3121.08 (19)O3—C11—H11124.8
C11—O3—C8—C9−0.4 (3)C7—N2—C2—S10.2 (3)
C11—O3—C8—C7178.2 (2)C1—N1—C2—N21.8 (3)
C2—N2—C7—C888.1 (2)C1—N1—C2—S1−179.47 (17)
C9—C8—C7—N2−122.7 (3)O2—C3—C4—C50.4 (3)
O3—C8—C7—N259.2 (3)C1—C3—C4—C5−179.9 (2)
C6—O2—C3—C4−0.5 (3)O3—C8—C9—C100.7 (3)
C6—O2—C3—C1179.72 (19)C7—C8—C9—C10−177.6 (2)
C2—N1—C1—O10.9 (4)C3—O2—C6—C50.4 (3)
C2—N1—C1—C3−178.86 (19)O2—C6—C5—C4−0.2 (3)
C4—C3—C1—O1−2.1 (4)C3—C4—C5—C6−0.1 (3)
O2—C3—C1—O1177.7 (2)C8—C9—C10—C11−0.7 (3)
C4—C3—C1—N1177.7 (2)C9—C10—C11—O30.5 (4)
O2—C3—C1—N1−2.5 (3)C8—O3—C11—C10−0.1 (4)
C7—N2—C2—N1178.88 (18)
D—H···AD—HH···AD···AD—H···A
N1—H1···O20.862.242.672 (3)111
N2—H2···O10.862.002.677 (3)135
N2—H2···O1i0.862.433.091 (3)133
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O20.862.242.672 (3)111
N2—H2⋯O10.862.002.677 (3)135
N2—H2⋯O1i0.862.433.091 (3)133

Symmetry code: (i) .

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