| Literature DB >> 21202571 |
Jihong Li1, Wenhai Wang, Jingbo Lan, Jingsong You.
Abstract
The title compound, C(13)H(19)NO(3), is an important synthetic inter-mediate. Weak O-H⋯O and N-H⋯O hydrogen bonds enhance the stability of the crystal structure.Entities:
Year: 2008 PMID: 21202571 PMCID: PMC2961408 DOI: 10.1107/S160053680801009X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H19NO3 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 25 reflections |
| θ = 4.5–6.7º | |
| µ = 0.09 mm−1 | |
| Block, colourless | |
| 0.50 × 0.44 × 0.40 mm |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 25.5º |
| Monochromator: graphite | θmin = 2.4º |
| ω/2θ scans | |
| Absorption correction: none | |
| 1457 measured reflections | 3 standard reflections |
| 1397 independent reflections | every 120 reflections |
| 848 reflections with | intensity decay: 0.4% |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| | |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.21 e Å−3 | |
| 1397 reflections | Δρmin = −0.14 e Å−3 |
| 164 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.069 (8) |
| Secondary atom site location: difference Fourier map |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.1432 (3) | 0.3872 (3) | 0.16126 (19) | 0.0666 (8) | |
| O2 | 0.5192 (3) | 0.3286 (3) | −0.00264 (18) | 0.0703 (8) | |
| O3 | 0.2632 (4) | 0.0046 (3) | −0.0111 (2) | 0.0810 (10) | |
| H3 | 0.1945 | 0.0562 | −0.0140 | 0.097* | |
| N1 | 0.3536 (3) | 0.2340 (2) | 0.0926 (2) | 0.0487 (8) | |
| H1N1 | 0.2711 | 0.2433 | 0.1227 | 0.058* | |
| C1 | 0.1842 (4) | 0.4786 (3) | 0.0963 (3) | 0.0514 (9) | |
| C2 | 0.1074 (5) | 0.5935 (4) | 0.0851 (3) | 0.0709 (12) | |
| H2 | 0.0240 | 0.6099 | 0.1223 | 0.085* | |
| C3 | 0.1535 (6) | 0.6826 (4) | 0.0201 (4) | 0.0878 (16) | |
| H3A | 0.1009 | 0.7591 | 0.0133 | 0.105* | |
| C4 | 0.2760 (6) | 0.6610 (4) | −0.0355 (4) | 0.0929 (18) | |
| H4 | 0.3078 | 0.7226 | −0.0791 | 0.112* | |
| C5 | 0.3519 (5) | 0.5457 (4) | −0.0255 (3) | 0.0745 (13) | |
| H5 | 0.4337 | 0.5300 | −0.0642 | 0.089* | |
| C6 | 0.3096 (4) | 0.4533 (3) | 0.0402 (3) | 0.0489 (9) | |
| C7 | 0.0018 (6) | 0.3961 (7) | 0.2048 (3) | 0.109 (2) | |
| H7A | −0.0038 | 0.4739 | 0.2416 | 0.163* | |
| H7B | −0.0130 | 0.3233 | 0.2460 | 0.163* | |
| H7C | −0.0735 | 0.3970 | 0.1564 | 0.163* | |
| C8 | 0.4020 (4) | 0.3328 (3) | 0.0425 (2) | 0.0459 (9) | |
| C9 | 0.4288 (4) | 0.1097 (3) | 0.1012 (2) | 0.0456 (8) | |
| H9 | 0.5050 | 0.1060 | 0.0514 | 0.055* | |
| C10 | 0.3202 (5) | 0.0025 (3) | 0.0824 (3) | 0.0609 (10) | |
| H10A | 0.3691 | −0.0794 | 0.0932 | 0.073* | |
| H10B | 0.2387 | 0.0091 | 0.1273 | 0.073* | |
| C11 | 0.5075 (5) | 0.0978 (4) | 0.1981 (3) | 0.0632 (11) | |
| H11 | 0.5515 | 0.0115 | 0.2002 | 0.076* | |
| C12 | 0.6339 (6) | 0.1925 (5) | 0.2074 (4) | 0.0939 (16) | |
| H12A | 0.5957 | 0.2787 | 0.2045 | 0.141* | |
| H12B | 0.7031 | 0.1794 | 0.1562 | 0.141* | |
| H12C | 0.6832 | 0.1796 | 0.2674 | 0.141* | |
| C13 | 0.4068 (6) | 0.1084 (6) | 0.2833 (3) | 0.107 (2) | |
| H13A | 0.4630 | 0.0946 | 0.3406 | 0.160* | |
| H13B | 0.3299 | 0.0447 | 0.2788 | 0.160* | |
| H13C | 0.3631 | 0.1926 | 0.2849 | 0.160* |
| O1 | 0.0560 (16) | 0.0735 (18) | 0.0704 (16) | 0.0177 (16) | 0.0102 (13) | 0.0020 (15) |
| O2 | 0.0553 (16) | 0.0652 (18) | 0.0903 (18) | −0.0022 (15) | 0.0249 (16) | 0.0137 (16) |
| O3 | 0.072 (2) | 0.071 (2) | 0.099 (2) | 0.0007 (16) | −0.0180 (18) | −0.0113 (17) |
| N1 | 0.0369 (15) | 0.0481 (16) | 0.0610 (17) | 0.0057 (15) | 0.0078 (14) | 0.0039 (14) |
| C1 | 0.050 (2) | 0.046 (2) | 0.058 (2) | −0.0001 (18) | −0.0117 (19) | −0.0054 (18) |
| C2 | 0.064 (3) | 0.060 (3) | 0.089 (3) | 0.015 (2) | −0.016 (2) | −0.019 (2) |
| C3 | 0.070 (3) | 0.048 (2) | 0.146 (4) | 0.002 (2) | −0.043 (3) | 0.008 (3) |
| C4 | 0.067 (3) | 0.059 (3) | 0.152 (5) | −0.011 (3) | −0.030 (3) | 0.047 (3) |
| C5 | 0.053 (2) | 0.066 (2) | 0.104 (3) | −0.010 (2) | −0.011 (2) | 0.031 (3) |
| C6 | 0.044 (2) | 0.0442 (18) | 0.059 (2) | −0.0051 (17) | −0.0149 (17) | 0.0013 (17) |
| C7 | 0.077 (3) | 0.156 (6) | 0.094 (3) | 0.036 (4) | 0.030 (3) | 0.020 (4) |
| C8 | 0.037 (2) | 0.046 (2) | 0.054 (2) | −0.0041 (17) | −0.0023 (16) | 0.0044 (18) |
| C9 | 0.0387 (18) | 0.0447 (19) | 0.0534 (19) | 0.0069 (17) | 0.0040 (15) | −0.0004 (17) |
| C10 | 0.053 (2) | 0.050 (2) | 0.080 (3) | 0.0044 (19) | 0.000 (2) | 0.004 (2) |
| C11 | 0.062 (3) | 0.061 (3) | 0.067 (2) | 0.016 (2) | −0.009 (2) | 0.011 (2) |
| C12 | 0.096 (3) | 0.093 (3) | 0.093 (3) | 0.000 (3) | −0.037 (3) | −0.011 (3) |
| C13 | 0.120 (4) | 0.146 (5) | 0.054 (2) | 0.031 (5) | 0.004 (3) | 0.016 (3) |
| O1—C1 | 1.365 (4) | C6—C8 | 1.504 (5) |
| O1—C7 | 1.416 (5) | C7—H7A | 0.9600 |
| O2—C8 | 1.232 (4) | C7—H7B | 0.9600 |
| O3—C10 | 1.406 (5) | C7—H7C | 0.9600 |
| O3—H3 | 0.8200 | C9—C10 | 1.506 (5) |
| N1—C8 | 1.318 (4) | C9—C11 | 1.537 (5) |
| N1—C9 | 1.463 (4) | C9—H9 | 0.9800 |
| N1—H1N1 | 0.8600 | C10—H10A | 0.9700 |
| C1—C2 | 1.389 (5) | C10—H10B | 0.9700 |
| C1—C6 | 1.402 (5) | C11—C13 | 1.503 (6) |
| C2—C3 | 1.363 (6) | C11—C12 | 1.511 (6) |
| C2—H2 | 0.9300 | C11—H11 | 0.9800 |
| C3—C4 | 1.369 (7) | C12—H12A | 0.9600 |
| C3—H3A | 0.9300 | C12—H12B | 0.9600 |
| C4—C5 | 1.386 (6) | C12—H12C | 0.9600 |
| C4—H4 | 0.9300 | C13—H13A | 0.9600 |
| C5—C6 | 1.383 (5) | C13—H13B | 0.9600 |
| C5—H5 | 0.9300 | C13—H13C | 0.9600 |
| C1—O1—C7 | 119.1 (4) | N1—C8—C6 | 118.4 (3) |
| C10—O3—H3 | 109.5 | N1—C9—C10 | 109.7 (3) |
| C8—N1—C9 | 125.3 (3) | N1—C9—C11 | 111.0 (3) |
| C8—N1—H1N1 | 117.4 | C10—C9—C11 | 113.3 (3) |
| C9—N1—H1N1 | 117.4 | N1—C9—H9 | 107.5 |
| O1—C1—C2 | 122.5 (4) | C10—C9—H9 | 107.5 |
| O1—C1—C6 | 117.5 (3) | C11—C9—H9 | 107.5 |
| C2—C1—C6 | 120.0 (4) | O3—C10—C9 | 112.9 (3) |
| C3—C2—C1 | 120.4 (4) | O3—C10—H10A | 109.0 |
| C3—C2—H2 | 119.8 | C9—C10—H10A | 109.0 |
| C1—C2—H2 | 119.8 | O3—C10—H10B | 109.0 |
| C2—C3—C4 | 121.0 (4) | C9—C10—H10B | 109.0 |
| C2—C3—H3A | 119.5 | H10A—C10—H10B | 107.8 |
| C4—C3—H3A | 119.5 | C13—C11—C12 | 109.8 (4) |
| C3—C4—C5 | 118.8 (4) | C13—C11—C9 | 114.6 (3) |
| C3—C4—H4 | 120.6 | C12—C11—C9 | 111.8 (3) |
| C5—C4—H4 | 120.6 | C13—C11—H11 | 106.7 |
| C6—C5—C4 | 122.0 (5) | C12—C11—H11 | 106.7 |
| C6—C5—H5 | 119.0 | C9—C11—H11 | 106.7 |
| C4—C5—H5 | 119.0 | C11—C12—H12A | 109.5 |
| C5—C6—C1 | 117.7 (4) | C11—C12—H12B | 109.5 |
| C5—C6—C8 | 116.0 (3) | H12A—C12—H12B | 109.5 |
| C1—C6—C8 | 126.2 (3) | C11—C12—H12C | 109.5 |
| O1—C7—H7A | 109.5 | H12A—C12—H12C | 109.5 |
| O1—C7—H7B | 109.5 | H12B—C12—H12C | 109.5 |
| H7A—C7—H7B | 109.5 | C11—C13—H13A | 109.5 |
| O1—C7—H7C | 109.5 | C11—C13—H13B | 109.5 |
| H7A—C7—H7C | 109.5 | H13A—C13—H13B | 109.5 |
| H7B—C7—H7C | 109.5 | C11—C13—H13C | 109.5 |
| O2—C8—N1 | 122.0 (3) | H13A—C13—H13C | 109.5 |
| O2—C8—C6 | 119.6 (3) | H13B—C13—H13C | 109.5 |
| C7—O1—C1—C2 | 13.4 (5) | C9—N1—C8—C6 | 179.2 (3) |
| C7—O1—C1—C6 | −167.0 (4) | C5—C6—C8—O2 | 9.9 (5) |
| O1—C1—C2—C3 | 179.3 (3) | C1—C6—C8—O2 | −171.7 (3) |
| C6—C1—C2—C3 | −0.3 (6) | C5—C6—C8—N1 | −169.6 (3) |
| C1—C2—C3—C4 | −0.0 (6) | C1—C6—C8—N1 | 8.8 (5) |
| C2—C3—C4—C5 | 0.9 (7) | C8—N1—C9—C10 | −130.9 (4) |
| C3—C4—C5—C6 | −1.5 (7) | C8—N1—C9—C11 | 103.2 (4) |
| C4—C5—C6—C1 | 1.2 (6) | N1—C9—C10—O3 | 63.2 (4) |
| C4—C5—C6—C8 | 179.7 (4) | C11—C9—C10—O3 | −172.2 (3) |
| O1—C1—C6—C5 | −179.8 (3) | N1—C9—C11—C13 | 59.7 (4) |
| C2—C1—C6—C5 | −0.2 (5) | C10—C9—C11—C13 | −64.2 (5) |
| O1—C1—C6—C8 | 1.8 (5) | N1—C9—C11—C12 | −66.1 (4) |
| C2—C1—C6—C8 | −178.6 (3) | C10—C9—C11—C12 | 170.0 (3) |
| C9—N1—C8—O2 | −0.3 (5) |
| H··· | ||||
| O3—H3···O2i | 0.82 | 2.00 | 2.806 (4) | 170 |
| N1—H1N1···O1 | 0.86 | 1.96 | 2.656 (4) | 137 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3⋯O2i | 0.82 | 2.00 | 2.806 (4) | 170 |
| N1—H1N1⋯O1 | 0.86 | 1.96 | 2.656 (4) | 137 |
Symmetry code: (i) .