Literature DB >> 21202566

2-(2-Hydroxy-benzyl-ideneamino)benzonitrile.

Rong Xia1, Hai-Jun Xu, Xing-Xuan Gong.   

Abstract

The mol-ecule of the title compound, C(14)H(10)N(2)O, displays a trans configuration with respect to the C=N double bond. The mol-ecule is roughly planar; the two aromatic rings make a dihedral angle of 9.3 (3)°. Such a planar conformation is induced by the strong intra-molecular O-H⋯N hydrogen bond between the imine and hydroxyl groups.

Entities:  

Year:  2008        PMID: 21202566      PMCID: PMC2961580          DOI: 10.1107/S160053680801163X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures of similar Schiff base compounds, see: Cheng et al. (2005 ▶, 2006 ▶). For related literature, see: Chen et al. (2008 ▶); Elmah et al. (1999 ▶); May et al. (2004 ▶); Weber et al. (2007 ▶); Xu et al. (2008 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C14H10N2O M = 222.24 Monoclinic, a = 4.7667 (10) Å b = 16.190 (3) Å c = 7.6714 (15) Å β = 93.30 (3)° V = 591.0 (2) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 293 (2) K 0.20 × 0.05 × 0.05 mm

Data collection

Rigaku Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.981, T max = 1.00 (expected range = 0.977–0.996) 5470 measured reflections 1201 independent reflections 633 reflections with I > 2σ(I) R int = 0.105

Refinement

R[F 2 > 2σ(F 2)] = 0.061 wR(F 2) = 0.136 S = 1.03 1201 reflections 155 parameters 1 restraint H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.18 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶) and ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680801163X/dn2331sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680801163X/dn2331Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H10N2OF000 = 232
Mr = 222.24Dx = 1.249 Mg m3
Monoclinic, P21Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 4123 reflections
a = 4.7667 (10) Åθ = 3.7–28.7º
b = 16.190 (3) ŵ = 0.08 mm1
c = 7.6714 (15) ÅT = 293 (2) K
β = 93.30 (3)ºBlock, colorless
V = 591.0 (2) Å30.20 × 0.05 × 0.05 mm
Z = 2
Rigaku Mercury2 diffractometer1201 independent reflections
Radiation source: fine-focus sealed tube633 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.105
Detector resolution: 13.6612 pixels mm-1θmax = 26.0º
T = 293(2) Kθmin = 3.7º
ω scansh = −5→5
Absorption correction: multi-scan(CrystalClear; Rigaku, 2005)k = −19→19
Tmin = 0.981, Tmax = 1.00l = −9→9
5470 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.061H-atom parameters constrained
wR(F2) = 0.136  w = 1/[σ2(Fo2) + (0.048P)2] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
1201 reflectionsΔρmax = 0.15 e Å3
155 parametersΔρmin = −0.18 e Å3
1 restraintExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C1−0.0060 (10)0.5064 (3)0.8304 (7)0.0474 (15)
C2−0.0982 (11)0.5462 (4)0.6745 (9)0.0580 (16)
C3−0.2999 (13)0.6076 (4)0.6777 (10)0.076 (2)
H3−0.35940.63430.57470.091*
C4−0.4118 (14)0.6293 (4)0.8306 (12)0.0747 (19)
H4−0.54530.67120.83030.090*
C5−0.3320 (12)0.5906 (4)0.9860 (10)0.073 (2)
H5−0.41500.60471.08870.087*
C6−0.1256 (11)0.5303 (4)0.9858 (8)0.0639 (16)
H6−0.06520.50521.09040.077*
C70.2044 (10)0.4416 (3)0.8361 (7)0.0480 (14)
H70.25920.41790.94310.058*
C80.5180 (10)0.3518 (3)0.7054 (6)0.0431 (14)
C90.6040 (10)0.3216 (3)0.5473 (7)0.0526 (15)
C100.7977 (11)0.2575 (4)0.5400 (8)0.0657 (17)
H100.84840.23750.43260.079*
C110.9127 (13)0.2241 (4)0.6912 (9)0.0685 (18)
H111.04170.18120.68770.082*
C120.8365 (11)0.2546 (4)0.8477 (9)0.0623 (17)
H120.91820.23240.95030.075*
C130.6393 (11)0.3180 (3)0.8582 (7)0.0565 (15)
H130.58990.33730.96640.068*
C140.4758 (15)0.3547 (5)0.3888 (9)0.093 (2)
N10.3182 (9)0.4157 (2)0.6972 (5)0.0459 (11)
N20.3736 (15)0.3796 (5)0.2608 (8)0.147 (3)
O10.0028 (9)0.5256 (3)0.5203 (5)0.0815 (14)
H10.11740.48810.53480.122*
U11U22U33U12U13U23
C10.040 (3)0.047 (4)0.055 (4)−0.003 (3)0.005 (3)−0.002 (3)
C20.052 (3)0.044 (4)0.079 (5)0.005 (3)0.013 (3)0.011 (3)
C30.067 (5)0.068 (5)0.094 (6)0.010 (4)0.014 (4)0.020 (4)
C40.063 (4)0.043 (4)0.119 (6)0.012 (4)0.013 (4)−0.001 (4)
C50.051 (4)0.079 (5)0.089 (5)0.002 (3)0.014 (4)−0.029 (4)
C60.054 (4)0.075 (5)0.062 (4)−0.004 (4)−0.002 (3)−0.020 (3)
C70.043 (3)0.053 (4)0.047 (4)0.002 (3)−0.003 (2)−0.005 (3)
C80.046 (3)0.042 (4)0.042 (3)−0.002 (3)0.004 (2)−0.006 (2)
C90.050 (3)0.060 (4)0.048 (4)0.004 (3)0.001 (3)0.003 (3)
C100.065 (4)0.068 (5)0.065 (4)0.009 (3)0.005 (3)−0.017 (3)
C110.060 (4)0.072 (5)0.073 (5)0.007 (4)0.004 (3)−0.005 (4)
C120.056 (4)0.052 (4)0.080 (5)0.010 (3)0.006 (3)0.017 (3)
C130.059 (4)0.061 (4)0.050 (4)0.006 (3)0.010 (3)0.007 (3)
C140.093 (5)0.135 (7)0.052 (4)0.042 (5)0.005 (4)−0.012 (4)
N10.049 (3)0.041 (3)0.048 (3)−0.003 (2)0.0079 (19)0.000 (2)
N20.162 (7)0.225 (9)0.053 (4)0.106 (6)−0.002 (4)0.010 (5)
O10.085 (3)0.092 (4)0.069 (3)0.028 (2)0.020 (2)0.030 (2)
C1—C61.405 (7)C8—C131.389 (7)
C1—C21.406 (7)C8—C91.391 (6)
C1—C71.450 (6)C8—N11.406 (6)
C2—O11.345 (7)C9—C101.393 (7)
C2—C31.385 (8)C9—C141.433 (9)
C3—C41.363 (9)C10—C111.365 (8)
C3—H30.9300C10—H100.9300
C4—C51.381 (9)C11—C121.366 (8)
C4—H40.9300C11—H110.9300
C5—C61.387 (8)C12—C131.397 (7)
C5—H50.9300C12—H120.9300
C6—H60.9300C13—H130.9300
C7—N11.293 (5)C14—N21.144 (7)
C7—H70.9300O1—H10.8200
C6—C1—C2118.3 (5)C13—C8—C9117.9 (5)
C6—C1—C7119.1 (5)C13—C8—N1125.2 (5)
C2—C1—C7122.6 (5)C9—C8—N1116.9 (4)
O1—C2—C3118.5 (6)C8—C9—C10121.8 (5)
O1—C2—C1121.7 (5)C8—C9—C14118.4 (5)
C3—C2—C1119.8 (6)C10—C9—C14119.7 (5)
C4—C3—C2120.5 (6)C11—C10—C9119.7 (6)
C4—C3—H3119.8C11—C10—H10120.2
C2—C3—H3119.8C9—C10—H10120.2
C3—C4—C5121.6 (6)C10—C11—C12119.3 (6)
C3—C4—H4119.2C10—C11—H11120.3
C5—C4—H4119.2C12—C11—H11120.3
C4—C5—C6118.6 (6)C11—C12—C13122.0 (6)
C4—C5—H5120.7C11—C12—H12119.0
C6—C5—H5120.7C13—C12—H12119.0
C5—C6—C1121.2 (6)C8—C13—C12119.3 (5)
C5—C6—H6119.4C8—C13—H13120.3
C1—C6—H6119.4C12—C13—H13120.3
N1—C7—C1122.1 (4)N2—C14—C9178.6 (8)
N1—C7—H7118.9C7—N1—C8121.1 (4)
C1—C7—H7118.9C2—O1—H1109.5
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.821.922.651 (6)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.821.922.651 (6)147
  4 in total

1.  Covalent Schiff base catalysis and turnover by a DNAzyme: a M2+ -independent AP-endonuclease mimic.

Authors:  Jonathan P May; Richard Ting; Leonard Lermer; Jason M Thomas; Yoann Roupioz; David M Perrin
Journal:  J Am Chem Soc       Date:  2004-04-07       Impact factor: 15.419

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  3-(2-Hydroxy-benzyl-ideneamino)benzonitrile.

Authors:  Hai-Jun Xu; Xing-Xuan Gong; Han Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-02-29

4.  A bench-stable homodinuclear Ni2-Schiff base complex for catalytic asymmetric synthesis of alpha-tetrasubstituted anti-alpha,beta-diamino acid surrogates.

Authors:  Zhihua Chen; Hiroyuki Morimoto; Shigeki Matsunaga; Masakatsu Shibasaki
Journal:  J Am Chem Soc       Date:  2008-01-29       Impact factor: 15.419

  4 in total
  3 in total

1.  (E)-2-(2,4-Dihydroxy-benzyl-ideneamino)benzonitrile.

Authors:  Ting Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-06

2.  Bis{2-[(2-cyano-phen-yl)imino-meth-yl]phenolato}copper(II).

Authors:  Rong Xia; Hai-Jun Xu; Han Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-13

3.  Crystal structure, DFT and MEP study of (E)-2-[(2-hy-droxy-5-meth-oxy-benzyl-idene)amino]-benzo-nitrile.

Authors:  Md Serajul Haque Faizi; Necmi Dege; Ceren Çiçek; Erbil Agar; Igor O Fritsky
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2019-06-14
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.