Literature DB >> 21202558

3,4-Dihydroxy-benzaldehyde 4-phenyl-thio-semicarbazone.

Kong Wai Tan, Yang Farina, Chew Hee Ng, Mohd Jamil Maah, Seik Weng Ng.   

Abstract

Mol-ecules of the title compound, C(14)H(13)N(3)O(2)S, are linked by inter-molecular O-H⋯O hydrogen bonds into centrosymmetric dimers forming R(2) (2)(4) rings which are further linked by O-H⋯S hydrogen bonds and weaker N-H⋯S and N-H⋯O hydrogen bonds to form a three-dimensional network.

Entities:  

Year:  2008        PMID: 21202558      PMCID: PMC2961546          DOI: 10.1107/S1600536808013287

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of 2,3-dihydroxy­benzaldehyde thio­semi­carbazone hemihydrate, see: Swesi et al. (2006 ▶). For metal derivatives of the title compound, see: Zhu et al. (1997 ▶). The graph-set notation is given by Bernstein et al. (1995 ▶).

Experimental

Crystal data

C14H13N3O2S M = 287.33 Monoclinic, a = 9.7261 (2) Å b = 13.1863 (3) Å c = 10.7732 (3) Å β = 99.055 (2)° V = 1364.46 (6) Å3 Z = 4 Mo Kα radiation μ = 0.24 mm−1 T = 100 (2) K 0.40 × 0.30 × 0.20 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.909, T max = 0.953 16724 measured reflections 3132 independent reflections 2358 reflections with I > 2σ(I) R int = 0.078

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.115 S = 1.04 3132 reflections 197 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.40 e Å−3 Δρmin = −0.32 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808013287/lh2625sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808013287/lh2625Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H13N3O2SF000 = 600
Mr = 287.33Dx = 1.399 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2291 reflections
a = 9.7261 (2) Åθ = 2.5–23.4º
b = 13.1863 (3) ŵ = 0.24 mm1
c = 10.7732 (3) ÅT = 100 (2) K
β = 99.055 (2)ºBlock, yellow
V = 1364.46 (6) Å30.40 × 0.30 × 0.20 mm
Z = 4
Bruker SMART APEX diffractometer3132 independent reflections
Radiation source: fine-focus sealed tube2358 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.078
T = 100(2) Kθmax = 27.5º
ω scansθmin = 2.1º
Absorption correction: Multi-scan(SADABS; Sheldrick, 1996)h = −12→12
Tmin = 0.910, Tmax = 0.953k = −17→16
16724 measured reflectionsl = −13→13
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.115  w = 1/[σ2(Fo2) + (0.0502P)2 + 0.2883P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
3132 reflectionsΔρmax = 0.40 e Å3
197 parametersΔρmin = −0.32 e Å3
4 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
xyzUiso*/Ueq
S11.08441 (5)0.12769 (4)0.40212 (5)0.02006 (15)
O10.65919 (15)0.45705 (10)0.89678 (14)0.0221 (3)
O20.40955 (14)0.39195 (11)0.94986 (14)0.0231 (3)
N10.83208 (16)0.18905 (12)0.63925 (15)0.0187 (4)
N20.90695 (16)0.13520 (12)0.56294 (16)0.0185 (4)
N31.03542 (19)0.27810 (13)0.55853 (18)0.0258 (4)
C10.64419 (19)0.20682 (14)0.75172 (18)0.0172 (4)
C20.6914 (2)0.30261 (14)0.79586 (18)0.0177 (4)
H20.77980.32620.78140.021*
C30.61093 (19)0.36257 (14)0.85974 (18)0.0168 (4)
C40.48283 (19)0.32692 (15)0.88517 (18)0.0175 (4)
C50.4360 (2)0.23207 (15)0.84415 (19)0.0207 (4)
H50.34920.20770.86200.025*
C60.5160 (2)0.17194 (15)0.77643 (19)0.0204 (4)
H60.48310.10710.74710.024*
C70.72652 (19)0.14733 (15)0.67561 (19)0.0190 (4)
H70.70220.07920.65360.023*
C81.00702 (19)0.18502 (14)0.51400 (19)0.0177 (4)
C91.1227 (2)0.35150 (15)0.5122 (2)0.0212 (4)
C101.2393 (2)0.38550 (18)0.5909 (2)0.0304 (5)
H101.26510.35650.67190.037*
C111.3183 (3)0.4624 (2)0.5504 (2)0.0386 (6)
H111.39860.48630.60420.046*
C121.2821 (2)0.50451 (18)0.4336 (2)0.0339 (6)
H121.33660.55760.40700.041*
C131.1657 (2)0.46947 (18)0.3545 (2)0.0348 (6)
H131.14100.49770.27290.042*
C141.0858 (2)0.39327 (17)0.3946 (2)0.0287 (5)
H141.00530.36960.34100.034*
H1O0.602 (2)0.4875 (17)0.935 (2)0.035 (7)*
H2O0.3276 (14)0.3698 (18)0.950 (3)0.043 (8)*
H2N0.890 (2)0.0737 (9)0.542 (2)0.036 (7)*
H3N0.995 (2)0.2960 (17)0.6187 (16)0.027 (6)*
U11U22U33U12U13U23
S10.0175 (2)0.0195 (3)0.0249 (3)0.00003 (19)0.00859 (19)−0.0035 (2)
O10.0209 (7)0.0162 (7)0.0316 (9)−0.0015 (6)0.0116 (6)−0.0063 (6)
O20.0158 (7)0.0226 (8)0.0328 (9)−0.0011 (6)0.0093 (6)−0.0075 (6)
N10.0181 (8)0.0188 (9)0.0207 (9)0.0021 (7)0.0081 (7)−0.0017 (7)
N20.0173 (8)0.0148 (9)0.0250 (9)−0.0013 (7)0.0086 (7)−0.0043 (7)
N30.0313 (10)0.0202 (9)0.0310 (11)−0.0081 (8)0.0202 (8)−0.0076 (8)
C10.0159 (9)0.0187 (10)0.0178 (10)−0.0003 (7)0.0048 (8)−0.0011 (8)
C20.0146 (9)0.0178 (10)0.0216 (10)−0.0011 (7)0.0056 (8)−0.0001 (8)
C30.0169 (9)0.0148 (10)0.0184 (10)−0.0004 (7)0.0016 (7)0.0000 (7)
C40.0148 (9)0.0204 (10)0.0183 (10)0.0026 (7)0.0052 (7)−0.0008 (8)
C50.0141 (9)0.0206 (10)0.0285 (12)−0.0020 (8)0.0064 (8)−0.0007 (8)
C60.0199 (10)0.0175 (10)0.0246 (11)−0.0030 (8)0.0061 (8)−0.0026 (8)
C70.0185 (10)0.0168 (10)0.0223 (11)−0.0018 (8)0.0054 (8)−0.0027 (8)
C80.0145 (9)0.0167 (10)0.0224 (10)0.0011 (7)0.0046 (8)−0.0002 (8)
C90.0204 (10)0.0170 (10)0.0287 (12)−0.0037 (8)0.0114 (8)−0.0041 (8)
C100.0317 (12)0.0345 (13)0.0248 (12)−0.0058 (10)0.0034 (9)0.0012 (10)
C110.0328 (13)0.0442 (15)0.0381 (15)−0.0193 (11)0.0032 (11)−0.0047 (11)
C120.0323 (13)0.0250 (12)0.0474 (16)−0.0093 (10)0.0155 (11)0.0037 (11)
C130.0336 (13)0.0312 (13)0.0396 (15)0.0016 (10)0.0059 (11)0.0148 (11)
C140.0211 (10)0.0310 (12)0.0328 (13)−0.0033 (9)0.0011 (9)0.0030 (10)
S1—C81.696 (2)C3—C41.398 (3)
O1—C31.368 (2)C4—C51.380 (3)
O1—H1O0.85 (1)C5—C61.395 (3)
O2—C41.373 (2)C5—H50.9500
O2—H2O0.85 (1)C6—H60.9500
N1—C71.279 (2)C7—H70.9500
N1—N21.378 (2)C9—C141.376 (3)
N2—C81.348 (2)C9—C101.380 (3)
N2—H2N0.85 (1)C10—C111.383 (3)
N3—C81.331 (3)C10—H100.9500
N3—C91.428 (3)C11—C121.370 (3)
N3—H3N0.84 (1)C11—H110.9500
C1—C61.393 (3)C12—C131.385 (3)
C1—C21.401 (3)C12—H120.9500
C1—C71.461 (3)C13—C141.381 (3)
C2—C31.372 (3)C13—H130.9500
C2—H20.9500C14—H140.9500
C3—O1—H1O110.7 (17)C5—C6—H6119.9
C4—O2—H2O110.6 (18)N1—C7—C1118.55 (17)
C7—N1—N2119.07 (16)N1—C7—H7120.7
C8—N2—N1117.64 (16)C1—C7—H7120.7
C8—N2—H2N119.3 (17)N3—C8—N2115.47 (17)
N1—N2—H2N123.0 (17)N3—C8—S1125.24 (15)
C8—N3—C9126.89 (17)N2—C8—S1119.28 (15)
C8—N3—H3N116.2 (16)C14—C9—C10120.35 (19)
C9—N3—H3N116.9 (16)C14—C9—N3120.67 (19)
C6—C1—C2119.21 (17)C10—C9—N3118.8 (2)
C6—C1—C7121.05 (18)C9—C10—C11119.2 (2)
C2—C1—C7119.68 (17)C9—C10—H10120.4
C3—C2—C1120.50 (17)C11—C10—H10120.4
C3—C2—H2119.7C12—C11—C10120.8 (2)
C1—C2—H2119.7C12—C11—H11119.6
O1—C3—C2118.33 (17)C10—C11—H11119.6
O1—C3—C4121.62 (17)C11—C12—C13119.8 (2)
C2—C3—C4120.06 (17)C11—C12—H12120.1
O2—C4—C5123.84 (17)C13—C12—H12120.1
O2—C4—C3116.05 (17)C14—C13—C12119.7 (2)
C5—C4—C3120.10 (18)C14—C13—H13120.1
C4—C5—C6119.95 (18)C12—C13—H13120.1
C4—C5—H5120.0C9—C14—C13120.1 (2)
C6—C5—H5120.0C9—C14—H14119.9
C1—C6—C5120.14 (18)C13—C14—H14119.9
C1—C6—H6119.9
C7—N1—N2—C8172.24 (18)C2—C1—C7—N1−7.8 (3)
C6—C1—C2—C3−1.7 (3)C9—N3—C8—N2−171.35 (19)
C7—C1—C2—C3175.33 (18)C9—N3—C8—S17.8 (3)
C1—C2—C3—O1−177.55 (17)N1—N2—C8—N38.7 (3)
C1—C2—C3—C42.2 (3)N1—N2—C8—S1−170.51 (13)
O1—C3—C4—O2−0.4 (3)C8—N3—C9—C1466.2 (3)
C2—C3—C4—O2179.82 (17)C8—N3—C9—C10−118.6 (2)
O1—C3—C4—C5178.64 (18)C14—C9—C10—C110.3 (3)
C2—C3—C4—C5−1.1 (3)N3—C9—C10—C11−174.9 (2)
O2—C4—C5—C6178.51 (18)C9—C10—C11—C12−0.2 (4)
C3—C4—C5—C6−0.5 (3)C10—C11—C12—C13−0.5 (4)
C2—C1—C6—C50.1 (3)C11—C12—C13—C141.0 (4)
C7—C1—C6—C5−176.89 (18)C10—C9—C14—C130.1 (3)
C4—C5—C6—C11.0 (3)N3—C9—C14—C13175.3 (2)
N2—N1—C7—C1−177.22 (16)C12—C13—C14—C9−0.8 (4)
C6—C1—C7—N1169.23 (19)
D—H···AD—HH···AD···AD—H···A
O1—H1O···O2i0.85 (1)2.03 (2)2.737 (2)141 (2)
O2—H2O···S1ii0.85 (1)2.34 (1)3.134 (1)156 (2)
N2—H2N···S1iii0.85 (1)2.73 (1)3.487 (2)150 (2)
N2—H2N···O1iv0.85 (1)2.56 (2)3.022 (2)115 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1o⋯O2i0.85 (1)2.03 (2)2.737 (2)141 (2)
O2—H2o⋯S1ii0.85 (1)2.34 (1)3.134 (1)156 (2)
N2—H2n⋯S1iii0.85 (1)2.73 (1)3.487 (2)150 (2)
N2—H2n⋯O1iv0.85 (1)2.56 (2)3.022 (2)115 (2)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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