Literature DB >> 21202510

Chlorido(pyridine-2-carbaldehyde oximato-κN,N')(pyridine-2-carbaldehyde oxime-κN,N')copper(II).

Genhua Wu1, Dayu Wu.   

Abstract

In the title compound, [Cu(C(6)H(5)N(2)O)Cl(C(6)H(6)N(2)O)], the Cu atom is coordinated by one neutral and one deprotonated pyridine-2-carboxaldehyde oxime (pco) ligand, resulting in the formation of two five-membered CuN(2)C(2) rings. Together with the additional coordinating chloride anion, the coordination polyhedron of copper is best described as a distorted square-pyramid, the distortion parameter being 0.288. The two organic ligands are linked by an intramolecular O-H⋯O hydrogen bond.

Entities:  

Year:  2008        PMID: 21202510      PMCID: PMC2961395          DOI: 10.1107/S1600536808014748

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Addison et al. (1984 ▶); Afrati et al. (2005 ▶); Korpi et al. (2005 ▶); Pearse et al. (1989 ▶); Stamatatos et al. (2006 ▶).

Experimental

Crystal data

[Cu(C6H5N2O)Cl(C6H6N2O)] M = 342.24 Monoclinic, a = 16.686 (2) Å b = 12.064 (2) Å c = 13.805 (1) Å β = 109.02 (1)° V = 2627.3 (5) Å3 Z = 8 Mo Kα radiation μ = 1.87 mm−1 T = 293 (2) K 0.22 × 0.18 × 0.15 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SHELXTL; Sheldrick, 2008 ▶) T min = 0.488, T max = 0.594 (expected range = 0.620–0.755) 6487 measured reflections 2318 independent reflections 1788 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.110 S = 1.01 2318 reflections 181 parameters H-atom parameters constrained Δρmax = 0.40 e Å−3 Δρmin = −0.39 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808014748/im2064sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808014748/im2064Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C6H5N2O)Cl(C6H6N2O)]F000 = 1384
Mr = 342.24Dx = 1.730 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 2343 reflections
a = 16.686 (2) Åθ = 2.4–26.6º
b = 12.064 (2) ŵ = 1.87 mm1
c = 13.805 (1) ÅT = 293 (2) K
β = 109.02 (1)ºBlock, dark green
V = 2627.3 (5) Å30.22 × 0.18 × 0.15 mm
Z = 8
Bruker SMART CCD area-detector diffractometer2318 independent reflections
Radiation source: fine-focus sealed tube1788 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.034
T = 293(2) Kθmax = 25.0º
φ and ω scansθmin = 2.1º
Absorption correction: multi-scan(SHELXTL; Sheldrick, 2008)h = −14→19
Tmin = 0.488, Tmax = 0.594k = −14→13
6487 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.029H-atom parameters constrained
wR(F2) = 0.110  w = 1/[σ2(Fo2) + (0.065P)2 + 1.2P] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max = 0.001
2318 reflectionsΔρmax = 0.40 e Å3
181 parametersΔρmin = −0.39 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.45583 (2)0.75857 (3)0.08754 (3)0.03490 (18)
Cl10.39133 (6)0.74459 (6)−0.09737 (7)0.0452 (3)
N20.39301 (17)0.8985 (2)0.1014 (2)0.0365 (6)
N30.53622 (18)0.6345 (2)0.0978 (2)0.0432 (7)
N40.39418 (17)0.6311 (2)0.1352 (2)0.0386 (7)
O20.60997 (16)0.6484 (2)0.0801 (2)0.0594 (7)
C10.3107 (2)0.9115 (3)0.0892 (3)0.0445 (9)
H1A0.27610.84910.07640.053*
N10.54953 (17)0.8713 (2)0.1156 (2)0.0431 (7)
C110.4316 (2)0.5328 (3)0.1314 (3)0.0427 (9)
C50.4419 (2)0.9892 (3)0.1166 (3)0.0433 (8)
O10.63020 (15)0.8491 (3)0.1224 (2)0.0666 (8)
H1B0.63460.78340.11000.100*
C20.2750 (3)1.0126 (4)0.0946 (3)0.0585 (11)
H2A0.21771.01870.08660.070*
C90.3236 (3)0.4362 (4)0.1762 (3)0.0647 (12)
H9A0.30020.37070.19030.078*
C70.3232 (2)0.6295 (3)0.1599 (3)0.0457 (9)
H7A0.29730.69680.16380.055*
C120.5115 (2)0.5390 (3)0.1109 (3)0.0463 (9)
H12A0.54260.47600.10760.056*
C60.5299 (2)0.9703 (3)0.1257 (3)0.0483 (9)
H6A0.56921.02760.13810.058*
C100.3975 (3)0.4349 (3)0.1509 (3)0.0579 (11)
H10A0.42390.36800.14710.069*
C80.2865 (3)0.5352 (4)0.1798 (3)0.0593 (11)
H8A0.23650.53880.19570.071*
C40.4094 (3)1.0927 (3)0.1215 (3)0.0636 (12)
H4A0.44401.15500.13130.076*
C30.3253 (3)1.1034 (3)0.1118 (4)0.0718 (13)
H3A0.30291.17290.11710.086*
U11U22U33U12U13U23
Cu10.0277 (3)0.0340 (3)0.0441 (3)0.00547 (15)0.0132 (2)−0.00158 (17)
Cl10.0482 (6)0.0432 (5)0.0407 (5)0.0035 (4)0.0094 (4)−0.0023 (4)
N20.0355 (16)0.0317 (15)0.0418 (16)0.0041 (12)0.0118 (13)−0.0026 (12)
N30.0398 (17)0.0480 (19)0.0432 (17)0.0156 (14)0.0152 (14)0.0003 (14)
N40.0385 (16)0.0366 (16)0.0392 (16)0.0031 (12)0.0107 (13)0.0023 (12)
O20.0440 (16)0.0712 (19)0.0731 (19)0.0207 (14)0.0327 (14)0.0047 (15)
C10.040 (2)0.044 (2)0.049 (2)0.0096 (16)0.0142 (17)0.0009 (16)
N10.0286 (16)0.0516 (19)0.0505 (18)−0.0040 (13)0.0147 (14)−0.0005 (14)
C110.052 (2)0.0372 (19)0.032 (2)0.0057 (16)0.0044 (17)−0.0001 (15)
C50.052 (2)0.038 (2)0.040 (2)0.0022 (16)0.0157 (18)−0.0024 (16)
O10.0326 (15)0.077 (2)0.092 (2)−0.0025 (13)0.0241 (15)−0.0042 (17)
C20.051 (2)0.066 (3)0.059 (3)0.029 (2)0.019 (2)0.002 (2)
C90.069 (3)0.058 (3)0.058 (3)−0.024 (2)0.009 (2)0.009 (2)
C70.041 (2)0.051 (2)0.047 (2)−0.0006 (17)0.0166 (17)0.0022 (17)
C120.052 (2)0.044 (2)0.040 (2)0.0195 (18)0.0113 (18)−0.0006 (17)
C60.045 (2)0.045 (2)0.056 (2)−0.0115 (17)0.0177 (18)−0.0050 (18)
C100.071 (3)0.036 (2)0.053 (2)−0.0020 (19)0.002 (2)0.0001 (18)
C80.052 (3)0.067 (3)0.057 (3)−0.014 (2)0.016 (2)0.006 (2)
C40.080 (3)0.031 (2)0.079 (3)0.0027 (19)0.025 (3)−0.0044 (19)
C30.088 (4)0.044 (3)0.084 (3)0.033 (2)0.029 (3)−0.004 (2)
Cu1—N31.984 (3)C5—C41.371 (5)
Cu1—N12.012 (3)C5—C61.451 (5)
Cu1—N22.029 (3)O1—H1B0.8200
Cu1—N42.072 (3)C2—C31.352 (6)
Cu1—Cl12.4316 (10)C2—H2A0.9300
N2—C11.338 (4)C9—C81.354 (6)
N2—C51.340 (4)C9—C101.385 (6)
N3—C121.256 (5)C9—H9A0.9300
N3—O21.341 (3)C7—C81.361 (5)
N4—C71.335 (4)C7—H7A0.9300
N4—C111.350 (4)C12—H12A0.9300
C1—C21.370 (5)C6—H6A0.9300
C1—H1A0.9300C10—H10A0.9300
N1—C61.258 (4)C8—H8A0.9300
N1—O11.345 (3)C4—C31.371 (6)
C11—C101.375 (5)C4—H4A0.9300
C11—C121.453 (5)C3—H3A0.9300
N3—Cu1—N191.79 (14)C4—C5—C6123.0 (4)
N3—Cu1—N2168.29 (12)N1—O1—H1B109.5
N1—Cu1—N279.19 (11)C3—C2—C1118.4 (4)
N3—Cu1—N479.15 (12)C3—C2—H2A120.8
N1—Cu1—N4151.07 (12)C1—C2—H2A120.8
N2—Cu1—N4105.21 (11)C8—C9—C10118.3 (4)
N3—Cu1—Cl194.60 (9)C8—C9—H9A120.9
N1—Cu1—Cl1107.40 (9)C10—C9—H9A120.9
N2—Cu1—Cl195.22 (8)N4—C7—C8124.0 (4)
N4—Cu1—Cl1100.71 (8)N4—C7—H7A118.0
C1—N2—C5118.1 (3)C8—C7—H7A118.0
C1—N2—Cu1128.8 (2)N3—C12—C11116.1 (3)
C5—N2—Cu1112.8 (2)N3—C12—H12A121.9
C12—N3—O2120.3 (3)C11—C12—H12A121.9
C12—N3—Cu1117.1 (2)N1—C6—C5115.7 (3)
O2—N3—Cu1122.1 (2)N1—C6—H6A122.2
C7—N4—C11117.2 (3)C5—C6—H6A122.2
C7—N4—Cu1131.7 (2)C11—C10—C9119.9 (4)
C11—N4—Cu1110.9 (2)C11—C10—H10A120.0
N2—C1—C2122.9 (4)C9—C10—H10A120.0
N2—C1—H1A118.5C9—C8—C7119.2 (4)
C2—C1—H1A118.5C9—C8—H8A120.4
C6—N1—O1118.2 (3)C7—C8—H8A120.4
C6—N1—Cu1116.6 (2)C5—C4—C3119.3 (4)
O1—N1—Cu1125.2 (2)C5—C4—H4A120.4
N4—C11—C10121.4 (4)C3—C4—H4A120.4
N4—C11—C12115.3 (3)C2—C3—C4119.8 (4)
C10—C11—C12123.2 (3)C2—C3—H3A120.1
N2—C5—C4121.4 (4)C4—C3—H3A120.1
N2—C5—C6115.6 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1B···O20.821.702.488 (5)162
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1B⋯O20.821.702.488 (5)162
  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  2 in total

1.  Chlorido[1-(pyridin-2-yl)ethanone oximato-κN,N'][1-(2-pyrid-yl)ethanone oxime-κN,N']copper(II) trihydrate.

Authors:  Xiumin Qiu; Leilei Li; Dacheng Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-23

2.  Aqua[1-(pyridin-2-yl)ethanone oximato][1-(2-pyridin-2-yl)ethanone oxime]-copper(II) perchlorate mono-hydrate.

Authors:  Baoyun Zhong; Shengli Li; Guifang Chen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-13
  2 in total

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