Literature DB >> 21202503

Di-μ-thio-semicarbazide-κS:S-bis-[bis-(thio-semicarbazide-κS)copper(I)] diiodide.

Li Jia, Shou-Xin Ma, Da-Cheng Li.   

Abstract

The title compound, [Cu(2){SC(NH(2))NHNH(2)}(6)]I(2), was obtained by the reaction of CuI and thio-semicarbazide (TSCZ) in acetonitrile. Each Cu(I) ion is coordinated by four S atoms of the TSCZ ligands, forming a tetra-hedral geometry. Centrosymmetric dimers are formed by two coordination tetra-hedra sharing a common edge, with a Cu⋯Cu distance of 2.8236 (14) Å. The I(-) ion does not have any direct inter-action with the metal. The crystal structure is stabilized by weak N-H⋯N, N-H⋯S and N-H⋯I hydrogen bonds, forming a three-dimensional network structure.

Entities:  

Year:  2008        PMID: 21202503      PMCID: PMC2961471          DOI: 10.1107/S1600536808014001

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For similar structures, see: Chattopadhyay et al. (1991 ▶); Burrows et al. (2004 ▶); Tong et al. (2000 ▶).

Experimental

Crystal data

[Cu2(CH5N3S)6]I2 M = 927.72 Monoclinic, a = 16.437 (4) Å b = 8.4174 (15) Å c = 22.546 (4) Å β = 105.385 (5)° V = 3007.6 (10) Å3 Z = 4 Mo Kα radiation μ = 3.92 mm−1 T = 273 (2) K 0.45 × 0.37 × 0.23 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.272, T max = 0.466 (expected range = 0.237–0.406) 7573 measured reflections 2636 independent reflections 2135 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.106 S = 1.01 2636 reflections 154 parameters H-atom parameters constrained Δρmax = 0.87 e Å−3 Δρmin = −0.99 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808014001/cf2195sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808014001/cf2195Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2(C1H5N3S1)6]I2F000 = 1808
Mr = 927.72Dx = 2.049 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
a = 16.437 (4) ÅCell parameters from 4159 reflections
b = 8.4174 (15) Åθ = 2.6–27.8º
c = 22.546 (4) ŵ = 3.92 mm1
β = 105.385 (5)ºT = 273 (2) K
V = 3007.6 (10) Å3Block, colorless
Z = 40.45 × 0.37 × 0.23 mm
Bruker SMART CCD diffractometer2636 independent reflections
Radiation source: fine-focus sealed tube2135 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.040
T = 273(2) Kθmax = 25.0º
φ and ω scansθmin = 2.7º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −19→19
Tmin = 0.272, Tmax = 0.466k = −10→9
7573 measured reflectionsl = −26→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037H-atom parameters constrained
wR(F2) = 0.106  w = 1/[σ2(Fo2) + (0.059P)2 + 7.7455P] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max < 0.001
2636 reflectionsΔρmax = 0.87 e Å3
154 parametersΔρmin = −0.99 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.46872 (4)−0.07773 (6)0.68532 (3)0.04027 (19)
I10.65686 (2)0.58550 (4)0.582631 (19)0.05668 (17)
N10.5760 (3)0.0278 (5)0.5883 (2)0.0488 (11)
H1A0.61450.03540.56890.059*
H1B0.5809−0.04130.61710.059*
N20.5046 (3)0.2253 (5)0.5297 (2)0.0543 (12)
H20.46180.28790.51950.065*
N30.5685 (3)0.2350 (6)0.4990 (2)0.0617 (13)
H3A0.61140.17260.50910.074*
H3B0.56470.30340.47000.074*
N40.7280 (3)0.1713 (5)0.7543 (3)0.0783 (19)
H4A0.74490.26770.75310.094*
H4B0.76430.09570.76430.094*
N50.5934 (2)0.2573 (4)0.7257 (2)0.0407 (9)
H50.54020.23750.71640.049*
N60.6214 (3)0.4144 (4)0.7244 (2)0.0467 (11)
H6A0.67460.43470.73360.056*
H6B0.58540.49040.71440.056*
N70.2933 (3)−0.2581 (5)0.5981 (2)0.0601 (14)
H7A0.2449−0.27810.57320.072*
H7B0.3049−0.16360.61240.072*
N80.3286 (3)−0.5151 (5)0.5913 (2)0.0492 (11)
H80.3644−0.59160.60100.059*
N90.2482 (3)−0.5449 (5)0.5508 (2)0.0555 (12)
H9A0.2120−0.46920.54090.067*
H9B0.2355−0.63870.53620.067*
S10.42975 (7)0.11539 (13)0.61021 (6)0.0390 (3)
S20.61502 (7)−0.05460 (13)0.74208 (6)0.0344 (3)
S30.44805 (8)−0.34566 (13)0.66223 (6)0.0423 (3)
C10.5100 (3)0.1217 (5)0.5738 (2)0.0361 (10)
C20.6478 (3)0.1399 (5)0.7409 (2)0.0347 (10)
C30.3498 (3)−0.3726 (5)0.6145 (2)0.0360 (11)
U11U22U33U12U13U23
Cu10.0445 (4)0.0355 (3)0.0419 (4)−0.0033 (2)0.0134 (3)0.0014 (3)
I10.0626 (3)0.0556 (3)0.0537 (3)0.01216 (16)0.0185 (2)0.01200 (17)
N10.049 (3)0.056 (2)0.047 (3)0.011 (2)0.023 (2)0.011 (2)
N20.065 (3)0.052 (3)0.049 (3)0.006 (2)0.020 (2)0.017 (2)
N30.081 (3)0.063 (3)0.051 (3)0.006 (2)0.035 (3)0.013 (2)
N40.032 (3)0.043 (3)0.143 (6)−0.0066 (19)−0.006 (3)0.028 (3)
N50.030 (2)0.0341 (19)0.057 (3)−0.0014 (16)0.0111 (18)−0.0001 (19)
N60.035 (2)0.032 (2)0.069 (3)−0.0013 (15)0.006 (2)0.0072 (19)
N70.044 (3)0.041 (2)0.084 (4)0.008 (2)−0.004 (2)−0.010 (2)
N80.046 (2)0.035 (2)0.066 (3)0.0022 (18)0.013 (2)−0.010 (2)
N90.046 (3)0.045 (2)0.073 (4)−0.0051 (19)0.010 (2)−0.020 (2)
S10.0362 (6)0.0352 (6)0.0458 (8)0.0042 (5)0.0110 (5)0.0067 (5)
S20.0296 (6)0.0322 (5)0.0427 (7)0.0013 (4)0.0118 (5)0.0042 (5)
S30.0418 (7)0.0307 (6)0.0511 (8)0.0054 (5)0.0064 (6)−0.0008 (5)
C10.044 (3)0.028 (2)0.034 (3)−0.0051 (19)0.006 (2)−0.001 (2)
C20.031 (2)0.038 (2)0.034 (3)−0.0014 (19)0.007 (2)0.009 (2)
C30.040 (3)0.032 (2)0.041 (3)−0.0030 (19)0.019 (2)−0.002 (2)
Cu1—S12.3118 (14)N5—N61.404 (5)
Cu1—S32.3192 (13)N5—H50.860
Cu1—S2i2.4098 (13)N6—H6A0.860
Cu1—S22.4136 (14)N6—H6B0.860
Cu1—Cu1i2.8236 (14)N7—C31.321 (6)
N1—C11.312 (6)N7—H7A0.860
N1—H1A0.860N7—H7B0.860
N1—H1B0.860N8—C31.318 (6)
N2—C11.307 (6)N8—N91.415 (6)
N2—N31.405 (6)N8—H80.860
N2—H20.860N9—H9A0.860
N3—H3A0.860N9—H9B0.860
N3—H3B0.860S1—C11.730 (5)
N4—C21.300 (6)S2—C21.726 (4)
N4—H4A0.860S2—Cu1i2.4098 (13)
N4—H4B0.860S3—C31.702 (5)
N5—C21.315 (6)
S1—Cu1—S3121.59 (6)N5—N6—H6B120.0
S1—Cu1—S2i110.09 (5)H6A—N6—H6B120.0
S3—Cu1—S2i98.91 (5)C3—N7—H7A120.0
S1—Cu1—S2112.03 (5)C3—N7—H7B120.0
S3—Cu1—S2105.28 (5)H7A—N7—H7B120.0
S2i—Cu1—S2107.55 (4)C3—N8—N9121.4 (4)
S1—Cu1—Cu1i135.30 (4)C3—N8—H8119.3
S3—Cu1—Cu1i102.91 (4)N9—N8—H8119.3
S2i—Cu1—Cu1i54.23 (4)N8—N9—H9A120.0
S2—Cu1—Cu1i54.11 (4)N8—N9—H9B120.0
C1—N1—H1A120.0H9A—N9—H9B120.0
C1—N1—H1B120.0C1—S1—Cu1105.77 (16)
H1A—N1—H1B120.0C2—S2—Cu1i108.92 (16)
C1—N2—N3120.4 (4)C2—S2—Cu1109.82 (16)
C1—N2—H2119.8Cu1i—S2—Cu171.66 (4)
N3—N2—H2119.8C3—S3—Cu1109.23 (15)
N2—N3—H3A120.0N2—C1—N1118.4 (5)
N2—N3—H3B120.0N2—C1—S1118.4 (4)
H3A—N3—H3B120.0N1—C1—S1123.2 (4)
C2—N4—H4A120.0N4—C2—N5119.0 (4)
C2—N4—H4B120.0N4—C2—S2119.4 (4)
H4A—N4—H4B120.0N5—C2—S2121.6 (3)
C2—N5—N6120.6 (4)N8—C3—N7117.4 (5)
C2—N5—H5119.7N8—C3—S3118.6 (4)
N6—N5—H5119.7N7—C3—S3124.0 (4)
N5—N6—H6A120.0
D—H···AD—HH···AD···AD—H···A
N1—H1A···N9ii0.862.443.219 (6)152
N1—H1B···S20.862.733.426 (5)140
N2—H2···I1iii0.862.803.526 (5)143
N3—H3B···S3iv0.862.953.692 (5)145
N4—H4A···S2v0.862.723.446 (4)142
N4—H4B···N6vi0.862.383.225 (6)167
N5—H5···S10.862.793.424 (4)132
N6—H6A···N4v0.862.523.225 (6)139
N7—H7B···I1vii0.863.153.620 (4)117
N8—H8···S1viii0.862.683.499 (4)161
N9—H9B···I1ix0.862.983.608 (5)132
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯N9i0.862.443.219 (6)152
N1—H1B⋯S20.862.733.426 (5)140
N2—H2⋯I1ii0.862.803.526 (5)143
N3—H3B⋯S3iii0.862.953.692 (5)145
N4—H4A⋯S2iv0.862.723.446 (4)142
N4—H4B⋯N6v0.862.383.225 (6)167
N5—H5⋯S10.862.793.424 (4)132
N6—H6A⋯N4iv0.862.523.225 (6)139
N7—H7B⋯I1vi0.863.153.620 (4)117
N8—H8⋯S1vii0.862.683.499 (4)161
N9—H9B⋯I1viii0.862.983.608 (5)132

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .

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