Literature DB >> 21202450

cis-Dichloridobis(1,10-phenanthroline-κN,N')manganese(II)-2,6-dihydroxy-benzoic acid-water (2/1/4).

Qian Yang1, Jing-Jing Nie, Duan-Jun Xu.   

Abstract

In the crystal structure of the title compound, [MnCl(2)(C(12)H(8)N(2))(2)]·0.5C(7)H(6)O(4)·2H(2)O, the Mn(II) complex assumes a distorted octa-hedral geometry formed by two chloride anions and two phenanthroline (phen) ligands. The 2,6-dihydroxy-benzoic acid mol-ecule is disordered about an inversion center. The face-to-face separations of 3.540 (11) and 3.429 (8) Å between parallel phen ligands indicate the existence of π-π stacking between adjacent Mn(II) complexes. Uncoordinated water mol-ecules are linked with complex and dihydroxy-benzoic acid mol-ecules via O-H⋯Cl and O-H⋯O hydrogen bonds.

Entities:  

Year:  2008        PMID: 21202450      PMCID: PMC2961560          DOI: 10.1107/S1600536808012427

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Su & Xu (2004 ▶). For related structures, see: McCann et al. (1998 ▶); Pan & Xu (2005 ▶).

Experimental

Crystal data

[MnCl2(C12H8N2)2]·0.5C7H6O4·2H2O M = 599.34 Triclinic, a = 9.757 (2) Å b = 11.985 (3) Å c = 13.261 (3) Å α = 63.465 (17)° β = 83.931 (18)° γ = 76.819 (18)° V = 1350.8 (6) Å3 Z = 2 Mo Kα radiation μ = 0.73 mm−1 T = 295 (2) K 0.42 × 0.36 × 0.20 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.735, T max = 0.860 14401 measured reflections 4680 independent reflections 3662 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.191 S = 1.08 4680 reflections 355 parameters H-atom parameters constrained Δρmax = 0.55 e Å−3 Δρmin = −1.16 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808012427/ng2452sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808012427/ng2452Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[MnCl2(C12H8N2)2]·0.5C7H6O4·2H2OZ = 2
Mr = 599.34F000 = 614
Triclinic, P1Dx = 1.474 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 9.757 (2) ÅCell parameters from 6825 reflections
b = 11.985 (3) Åθ = 1.8–25.0º
c = 13.261 (3) ŵ = 0.73 mm1
α = 63.465 (17)ºT = 295 (2) K
β = 83.931 (18)ºPrism, yellow
γ = 76.819 (18)º0.42 × 0.36 × 0.20 mm
V = 1350.8 (6) Å3
Rigaku R-AXIS RAPID IP diffractometer4680 independent reflections
Radiation source: fine-focus sealed tube3662 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.029
Detector resolution: 10.00 pixels mm-1θmax = 25.0º
T = 295(2) Kθmin = 1.7º
ω scansh = −10→11
Absorption correction: multi-scan(ABSCOR; Higashi, 1995)k = −12→13
Tmin = 0.735, Tmax = 0.860l = −15→15
14401 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.059H-atom parameters constrained
wR(F2) = 0.191  w = 1/[σ2(Fo2) + (0.115P)2 + 0.6925P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max = 0.001
4680 reflectionsΔρmax = 0.55 e Å3
355 parametersΔρmin = −1.16 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Mn0.81692 (6)0.12805 (5)0.21903 (4)0.0452 (2)
Cl10.9994 (2)0.09801 (17)0.08753 (14)0.1086 (6)
Cl20.93733 (10)−0.05166 (9)0.38297 (8)0.0543 (3)
N10.8875 (3)0.2844 (3)0.2384 (3)0.0512 (8)
N20.7264 (4)0.3198 (3)0.0676 (3)0.0558 (8)
N30.6117 (3)0.1579 (3)0.3159 (2)0.0467 (7)
N40.6685 (3)0.0238 (3)0.1901 (3)0.0531 (8)
O10.4543 (14)0.3988 (12)0.7173 (9)0.132 (4)0.50
H1C0.37090.37810.71490.197*0.50
O20.4410 (16)0.5884 (14)0.3174 (9)0.146 (4)0.50
H2C0.35510.56900.32740.220*0.50
O30.2390 (11)0.4282 (12)0.6173 (11)0.135 (4)0.50
O40.2332 (11)0.5254 (11)0.4305 (10)0.127 (3)0.50
H4A0.14100.53280.43540.191*0.50
O1W0.0193 (5)0.2911 (4)0.6726 (4)0.1147 (15)
H1A0.06060.35310.64490.172*
H1B−0.04220.30810.71160.172*
O2W0.8797 (5)0.1644 (5)−0.1317 (3)0.1292 (19)
H2A0.90090.0907−0.12910.194*
H2B0.91630.1605−0.07670.194*
C10.9627 (5)0.2673 (5)0.3244 (4)0.0654 (12)
H10.98190.18640.38420.078*
C21.0141 (6)0.3642 (6)0.3295 (6)0.0855 (16)
H21.06530.34830.39150.103*
C30.9875 (6)0.4838 (6)0.2409 (6)0.0879 (17)
H31.02240.54950.24160.105*
C40.9086 (5)0.5059 (4)0.1508 (5)0.0719 (13)
C50.8757 (7)0.6265 (5)0.0563 (6)0.099 (2)
H50.91010.69430.05300.119*
C60.7955 (8)0.6450 (5)−0.0291 (6)0.101 (2)
H60.77540.7256−0.08910.121*
C70.7401 (5)0.5436 (5)−0.0299 (4)0.0750 (15)
C80.6572 (7)0.5591 (6)−0.1146 (4)0.096 (2)
H80.63440.6384−0.17580.115*
C90.6079 (6)0.4583 (7)−0.1093 (4)0.095 (2)
H90.55030.4694−0.16610.115*
C100.6453 (5)0.3365 (5)−0.0163 (4)0.0746 (14)
H100.61350.2676−0.01350.089*
C110.7730 (4)0.4222 (4)0.0615 (3)0.0560 (10)
C120.8574 (4)0.4022 (4)0.1523 (3)0.0529 (9)
C130.5854 (4)0.2205 (4)0.3785 (3)0.0559 (10)
H130.65230.26380.38050.067*
C140.4616 (5)0.2253 (4)0.4424 (4)0.0623 (11)
H140.44720.27060.48550.075*
C150.3644 (5)0.1629 (4)0.4398 (3)0.0615 (11)
H150.28210.16440.48200.074*
C160.3863 (4)0.0947 (4)0.3733 (3)0.0530 (10)
C170.2874 (4)0.0270 (4)0.3665 (4)0.0643 (12)
H170.20360.02660.40710.077*
C180.3139 (5)−0.0362 (5)0.3023 (4)0.0709 (13)
H180.2469−0.07800.29800.085*
C190.4431 (4)−0.0408 (4)0.2403 (4)0.0608 (11)
C200.4783 (5)−0.1079 (5)0.1742 (4)0.0751 (13)
H200.4143−0.15070.16690.090*
C210.6039 (6)−0.1109 (6)0.1212 (5)0.0800 (15)
H210.6277−0.15750.07940.096*
C220.6973 (5)−0.0441 (5)0.1296 (4)0.0664 (12)
H220.7833−0.04620.09210.080*
C230.5434 (4)0.0246 (4)0.2452 (3)0.0491 (9)
C240.5137 (4)0.0953 (3)0.3123 (3)0.0453 (8)
C300.2957 (16)0.4791 (16)0.5273 (14)0.098 (4)0.50
C310.4417 (8)0.4897 (11)0.5167 (7)0.0936 (16)0.50
C320.5181 (10)0.4401 (9)0.6154 (6)0.0936 (16)0.50
C330.6607 (9)0.4420 (9)0.6100 (7)0.0936 (16)0.50
H330.71190.40880.67610.112*0.50
C340.7267 (8)0.4935 (10)0.5060 (9)0.0936 (16)0.50
H340.82210.49480.50240.112*0.50
C350.6503 (10)0.5431 (9)0.4073 (7)0.0936 (16)0.50
H350.69450.57750.33770.112*0.50
C360.5077 (10)0.5412 (9)0.4127 (6)0.0936 (16)0.50
U11U22U33U12U13U23
Mn0.0442 (4)0.0484 (4)0.0457 (3)−0.0130 (3)0.0024 (2)−0.0218 (3)
Cl10.1378 (15)0.1000 (12)0.0928 (10)−0.0370 (10)0.0080 (9)−0.0421 (9)
Cl20.0508 (6)0.0569 (6)0.0510 (5)−0.0092 (4)−0.0020 (4)−0.0203 (4)
N10.0456 (18)0.0515 (19)0.0585 (19)−0.0100 (14)0.0004 (14)−0.0260 (16)
N20.0507 (19)0.061 (2)0.0484 (17)−0.0017 (16)−0.0026 (14)−0.0216 (16)
N30.0403 (17)0.0464 (17)0.0496 (16)−0.0062 (13)0.0019 (13)−0.0194 (14)
N40.0447 (18)0.065 (2)0.0572 (18)−0.0139 (15)0.0030 (14)−0.0323 (17)
O10.140 (10)0.152 (9)0.093 (7)−0.070 (8)0.013 (6)−0.030 (6)
O20.171 (12)0.210 (13)0.086 (7)−0.077 (10)0.002 (7)−0.071 (8)
O30.103 (7)0.172 (10)0.165 (10)−0.063 (7)0.031 (7)−0.095 (9)
O40.095 (7)0.158 (9)0.146 (9)−0.001 (6)−0.006 (7)−0.091 (8)
O1W0.141 (4)0.098 (3)0.126 (4)−0.037 (3)0.024 (3)−0.068 (3)
O2W0.099 (3)0.146 (4)0.077 (2)0.022 (3)0.002 (2)−0.014 (3)
C10.062 (3)0.068 (3)0.078 (3)−0.010 (2)−0.013 (2)−0.041 (2)
C20.070 (3)0.097 (4)0.122 (5)−0.007 (3)−0.015 (3)−0.078 (4)
C30.067 (3)0.089 (4)0.144 (5)−0.026 (3)0.008 (3)−0.079 (4)
C40.064 (3)0.049 (3)0.105 (4)−0.015 (2)0.026 (3)−0.040 (3)
C50.099 (5)0.055 (3)0.127 (5)−0.027 (3)0.038 (4)−0.028 (3)
C60.112 (5)0.047 (3)0.101 (4)−0.009 (3)0.040 (4)−0.008 (3)
C70.070 (3)0.059 (3)0.061 (3)0.005 (2)0.018 (2)−0.007 (2)
C80.098 (4)0.085 (4)0.057 (3)0.019 (3)0.004 (3)−0.009 (3)
C90.083 (4)0.128 (5)0.050 (3)0.025 (4)−0.018 (2)−0.035 (3)
C100.071 (3)0.093 (4)0.052 (2)0.005 (3)−0.011 (2)−0.032 (2)
C110.053 (2)0.049 (2)0.052 (2)−0.0009 (18)0.0151 (18)−0.0174 (18)
C120.045 (2)0.047 (2)0.064 (2)−0.0090 (17)0.0112 (18)−0.0249 (19)
C130.055 (2)0.056 (2)0.058 (2)−0.0078 (19)0.0042 (18)−0.028 (2)
C140.066 (3)0.059 (3)0.058 (2)−0.001 (2)0.007 (2)−0.028 (2)
C150.049 (2)0.060 (3)0.056 (2)0.003 (2)0.0095 (18)−0.017 (2)
C160.039 (2)0.056 (2)0.047 (2)−0.0011 (17)−0.0008 (16)−0.0113 (18)
C170.042 (2)0.073 (3)0.067 (3)−0.013 (2)0.0020 (19)−0.021 (2)
C180.047 (2)0.089 (3)0.074 (3)−0.025 (2)−0.005 (2)−0.027 (3)
C190.051 (2)0.070 (3)0.063 (2)−0.019 (2)−0.0091 (19)−0.026 (2)
C200.066 (3)0.093 (4)0.088 (3)−0.033 (3)−0.004 (2)−0.050 (3)
C210.079 (3)0.103 (4)0.091 (3)−0.030 (3)0.003 (3)−0.066 (3)
C220.065 (3)0.086 (3)0.071 (3)−0.025 (2)0.009 (2)−0.052 (3)
C230.043 (2)0.055 (2)0.0457 (19)−0.0085 (16)−0.0057 (15)−0.0180 (17)
C240.0361 (19)0.049 (2)0.0396 (17)−0.0025 (15)−0.0032 (14)−0.0116 (16)
C300.076 (8)0.114 (11)0.116 (12)−0.018 (8)0.007 (8)−0.062 (10)
C310.097 (4)0.090 (3)0.101 (4)−0.021 (3)0.013 (3)−0.050 (4)
C320.097 (4)0.090 (3)0.101 (4)−0.021 (3)0.013 (3)−0.050 (4)
C330.097 (4)0.090 (3)0.101 (4)−0.021 (3)0.013 (3)−0.050 (4)
C340.097 (4)0.090 (3)0.101 (4)−0.021 (3)0.013 (3)−0.050 (4)
C350.097 (4)0.090 (3)0.101 (4)−0.021 (3)0.013 (3)−0.050 (4)
C360.097 (4)0.090 (3)0.101 (4)−0.021 (3)0.013 (3)−0.050 (4)
Mn—N12.260 (3)C7—C111.408 (6)
Mn—N22.328 (3)C8—C91.370 (9)
Mn—N32.308 (3)C8—H80.9300
Mn—N42.275 (3)C9—C101.425 (8)
Mn—Cl12.440 (2)C9—H90.9300
Mn—Cl22.4387 (13)C10—H100.9300
N1—C11.334 (5)C11—C121.430 (6)
N1—C121.351 (5)C13—C141.405 (6)
N2—C101.350 (6)C13—H130.9300
N2—C111.370 (6)C14—C151.348 (7)
N3—C131.319 (5)C14—H140.9300
N3—C241.360 (5)C15—C161.419 (6)
N4—C221.347 (5)C15—H150.9300
N4—C231.355 (5)C16—C241.410 (5)
O1—C321.351 (12)C16—C171.428 (6)
O1—H1C0.9109C17—C181.344 (7)
O2—C361.307 (13)C17—H170.9300
O2—H2C0.9016C18—C191.434 (7)
O3—C301.211 (17)C18—H180.9300
O4—C301.305 (17)C19—C201.405 (7)
O4—H4A0.8817C19—C231.409 (6)
O1W—H1A0.8434C20—C211.348 (7)
O1W—H1B0.8012C20—H200.9300
O2W—H2A0.8461C21—C221.385 (7)
O2W—H2B0.8246C21—H210.9300
C1—C21.396 (7)C22—H220.9300
C1—H10.9300C23—C241.449 (5)
C2—C31.376 (8)C30—C311.445 (15)
C2—H20.9300C31—C321.3900
C3—C41.381 (8)C31—C361.3900
C3—H30.9300C32—C331.3900
C4—C51.421 (8)C33—C341.3900
C4—C121.432 (6)C33—H330.9300
C5—C61.351 (10)C34—C351.3900
C5—H50.9300C34—H340.9300
C6—C71.443 (9)C35—C361.3900
C6—H60.9300C35—H350.9300
C7—C81.373 (8)
N1—Mn—N4158.51 (12)N2—C11—C12117.6 (3)
N1—Mn—N390.22 (12)C7—C11—C12120.3 (5)
N4—Mn—N373.23 (12)N1—C12—C11118.7 (4)
N1—Mn—N272.54 (12)N1—C12—C4121.2 (4)
N4—Mn—N292.82 (13)C11—C12—C4120.1 (4)
N3—Mn—N287.93 (11)N3—C13—C14123.4 (4)
N1—Mn—Cl297.72 (9)N3—C13—H13118.3
N4—Mn—Cl297.17 (9)C14—C13—H13118.3
N3—Mn—Cl294.48 (8)C15—C14—C13118.5 (4)
N2—Mn—Cl2170.00 (10)C15—C14—H14120.7
N1—Mn—Cl198.05 (9)C13—C14—H14120.7
N4—Mn—Cl196.38 (9)C14—C15—C16120.6 (4)
N3—Mn—Cl1167.55 (9)C14—C15—H15119.7
N2—Mn—Cl185.73 (9)C16—C15—H15119.7
Cl2—Mn—Cl193.61 (6)C24—C16—C15116.8 (4)
C1—N1—C12118.4 (4)C24—C16—C17119.8 (4)
C1—N1—Mn125.0 (3)C15—C16—C17123.4 (4)
C12—N1—Mn116.5 (3)C18—C17—C16120.9 (4)
C10—N2—C11118.8 (4)C18—C17—H17119.6
C10—N2—Mn126.9 (3)C16—C17—H17119.6
C11—N2—Mn114.0 (3)C17—C18—C19121.6 (4)
C13—N3—C24118.4 (3)C17—C18—H18119.2
C13—N3—Mn127.1 (3)C19—C18—H18119.2
C24—N3—Mn114.3 (2)C20—C19—C23116.7 (4)
C22—N4—C23117.9 (4)C20—C19—C18124.2 (4)
C22—N4—Mn126.1 (3)C23—C19—C18119.1 (4)
C23—N4—Mn115.9 (3)C21—C20—C19120.6 (4)
C32—O1—H1C111.8C21—C20—H20119.7
C36—O2—H2C111.9C19—C20—H20119.7
C30—O4—H4A114.1C20—C21—C22119.5 (5)
H1A—O1W—H1B105.4C20—C21—H21120.2
H2A—O2W—H2B107.1C22—C21—H21120.2
N1—C1—C2123.5 (5)N4—C22—C21122.5 (4)
N1—C1—H1118.2N4—C22—H22118.7
C2—C1—H1118.2C21—C22—H22118.7
C3—C2—C1118.6 (5)N4—C23—C19122.7 (4)
C3—C2—H2120.7N4—C23—C24117.9 (3)
C1—C2—H2120.7C19—C23—C24119.4 (4)
C2—C3—C4119.7 (5)N3—C24—C16122.3 (4)
C2—C3—H3120.2N3—C24—C23118.6 (3)
C4—C3—H3120.2C16—C24—C23119.2 (4)
C3—C4—C5123.3 (5)O3—C30—O4123.6 (16)
C3—C4—C12118.6 (5)O3—C30—C31123.0 (14)
C5—C4—C12118.1 (6)O4—C30—C31113.3 (14)
C6—C5—C4121.5 (6)C32—C31—C36120.0
C6—C5—H5119.3C32—C31—C30117.6 (8)
C4—C5—H5119.3C36—C31—C30122.4 (8)
C5—C6—C7122.1 (5)O1—C32—C31121.1 (8)
C5—C6—H6119.0O1—C32—C33118.7 (8)
C7—C6—H6119.0C31—C32—C33120.0
C8—C7—C11118.4 (6)C32—C33—C34120.0
C8—C7—C6123.7 (5)C32—C33—H33120.0
C11—C7—C6117.9 (5)C34—C33—H33120.0
C9—C8—C7120.4 (5)C35—C34—C33120.0
C9—C8—H8119.8C35—C34—H34120.0
C7—C8—H8119.8C33—C34—H34120.0
C8—C9—C10119.5 (5)C36—C35—C34120.0
C8—C9—H9120.2C36—C35—H35120.0
C10—C9—H9120.2C34—C35—H35120.0
N2—C10—C9120.8 (6)O2—C36—C35117.5 (9)
N2—C10—H10119.6O2—C36—C31122.5 (9)
C9—C10—H10119.6C35—C36—C31120.0
N2—C11—C7122.1 (5)
D—H···AD—HH···AD···AD—H···A
O1W—H1A···O30.842.062.834 (13)152
O1W—H1B···O2Wi0.802.222.752 (6)124
O2W—H2A···Cl1ii0.852.092.904 (6)162
O2W—H2B···Cl10.822.142.946 (4)164
O1—H1C···O30.911.732.476 (18)137
O2—H2C···O40.901.692.444 (19)139
O4—H4A···O1Wiii0.882.282.886 (13)125
C3—H3···O1Wiv0.932.573.356 (9)143
C5—H5···Cl1v0.932.643.427 (7)143
C9—H9···O1vi0.932.413.275 (15)154
C9—H9···O2vii0.932.393.152 (15)140
C15—H15···Cl2viii0.932.823.674 (5)153
Table 1

Selected bond lengths (Å)

Mn—N12.260 (3)
Mn—N22.328 (3)
Mn—N32.308 (3)
Mn—N42.275 (3)
Mn—Cl12.440 (2)
Mn—Cl22.4387 (13)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1A⋯O30.842.062.834 (13)152
O1W—H1B⋯O2Wi0.802.222.752 (6)124
O2W—H2A⋯Cl1ii0.852.092.904 (6)162
O2W—H2B⋯Cl10.822.142.946 (4)164
O1—H1C⋯O30.911.732.476 (18)137
O2—H2C⋯O40.901.692.444 (19)139
O4—H4A⋯O1Wiii0.882.282.886 (13)125

Symmetry codes: (i) ; (ii) ; (iii) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  Bis(2,6-dihy-droxy-benzoato-κO,O)(nitrato-κO,O')bis-(1,10-phenanthroline-κN,N')neodymium(III).

Authors:  Junjia Zheng; Hongxiao Jin; Hongliang Ge
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-30
  1 in total

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