Literature DB >> 21202419

1,2-Bis[5-(4-cyano-phen-yl)-2-methyl-3-thien-yl]-3,3,4,4,5,5-hexa-fluoro-cyclo-pent-1-ene: a photochromic diaryl-ethene compound.

Gang Liu1, Qidong Tu, Qing Zhang, Congbin Fan, Tianshe Yang.   

Abstract

The mol-ecules of the title compound, C(29)H(16)F(6)N(2)S(2), a photochromic dithienylethene with 4-cyano-phenyl substituents, adopt an anti-parallel arrangement that is reponsible for photoactivity. The mol-ecule lies on a twofold rotation axis. The dihedral angle between the nearly planar cyclo-pentenyl and heteroaryl rings is 142.5 (3)°, and that between the heteroaryl and benzene rings is 22.4 (3)°. The distance between the heteroaryl rings of adjacent mol-ecules is 3.601 (2) Å, indicating a π-π interaction.

Entities:  

Year:  2008        PMID: 21202419      PMCID: PMC2961168          DOI: 10.1107/S1600536808011653

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a review of dithienylethyl­enes as photochromic compounds, see: Irie (2000 ▶). For phenyl-substituted derivatives, see: Pu, Liu et al. (2005 ▶); Pu, Yang et al. (2005 ▶). For another similar structure, see: Kobatake et al. (2004 ▶). For the manifestation of possible photochromic activity in relation to the conformation, see: Woodward & Hoffmann (1970 ▶).

Experimental

Crystal data

C29H16F6N2S2 M = 570.56 Monoclinic, a = 24.987 (10) Å b = 9.276 (4) Å c = 10.774 (4) Å β = 95.911 (7)° V = 2483.8 (17) Å3 Z = 4 Mo Kα radiation μ = 0.28 mm−1 T = 113 (2) K 0.36 × 0.20 × 0.10 mm

Data collection

Rigaku Saturn diffractometer Absorption correction: multi-scan (Jacobson, 1998 ▶) T min = 0.905, T max = 0.972 9917 measured reflections 2437 independent reflections 2130 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.145 S = 1.06 2437 reflections 180 parameters H-atom parameters constrained Δρmax = 0.90 e Å−3 Δρmin = −0.65 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2001 ▶); cell refinement: CrystalClear; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: CrystalStructure. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808011653/ng2448sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808011653/ng2448Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C29H16F6N2S2F000 = 1160
Mr = 570.56Dx = 1.526 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71070 Å
Hall symbol: -C2ycCell parameters from 3563 reflections
a = 24.987 (10) Åθ = 1.6–27.9º
b = 9.276 (4) ŵ = 0.28 mm1
c = 10.774 (4) ÅT = 113 (2) K
β = 95.911 (7)ºBlock, colorless
V = 2483.8 (17) Å30.36 × 0.20 × 0.10 mm
Z = 4
Rigaku Saturn diffractometer2437 independent reflections
Radiation source: rotating anode2130 reflections with I > 2σ(I)
Monochromator: confocalRint = 0.032
Detector resolution: 7.31 pixels mm-1θmax = 26.0º
T = 113(2) Kθmin = 1.6º
ω scansh = −30→30
Absorption correction: multi-scan(Jacobson, 1998)k = −11→11
Tmin = 0.905, Tmax = 0.972l = −12→13
9917 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.057  w = 1/[σ2(Fo2) + (0.0692P)2 + 6.3864P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.145(Δ/σ)max = 0.001
S = 1.07Δρmax = 0.90 e Å3
2437 reflectionsΔρmin = −0.65 e Å3
180 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0031 (9)
Secondary atom site location: difference Fourier map
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.12440 (3)0.06080 (7)0.81522 (6)0.0293 (2)
F10.04313 (8)0.57014 (18)0.94258 (16)0.0469 (5)
F20.09200 (7)0.57943 (19)0.7907 (2)0.0607 (7)
F3−0.02249 (10)0.7331 (3)0.8302 (2)0.0846 (10)
N10.34207 (11)0.1164 (3)1.4057 (3)0.0492 (7)
C10.13504 (10)0.1761 (3)0.9418 (2)0.0252 (6)
C20.09893 (10)0.2871 (3)0.9294 (2)0.0248 (6)
H20.09810.36210.98930.030*
C30.06264 (10)0.2802 (3)0.8183 (2)0.0244 (6)
C40.07183 (10)0.1622 (3)0.7454 (2)0.0270 (6)
C50.17915 (10)0.1560 (3)1.0408 (2)0.0248 (6)
C60.17718 (11)0.2247 (3)1.1548 (2)0.0281 (6)
H60.14620.27911.16930.034*
C70.21958 (11)0.2150 (3)1.2473 (3)0.0308 (6)
H70.21770.26241.32480.037*
C80.26506 (10)0.1355 (3)1.2265 (3)0.0287 (6)
C90.26789 (11)0.0656 (3)1.1132 (3)0.0292 (6)
H90.29900.01181.09880.035*
C100.22495 (11)0.0750 (3)1.0215 (3)0.0286 (6)
H100.22650.02600.94450.034*
C110.30895 (11)0.1252 (3)1.3245 (3)0.0350 (7)
C120.02472 (10)0.3973 (3)0.7823 (2)0.0228 (5)
C130.04203 (10)0.5483 (3)0.8172 (3)0.0274 (6)
C140.00000.6490 (4)0.75000.0306 (8)
C150.04599 (12)0.1178 (3)0.6201 (3)0.0331 (6)
H15A0.07140.06020.57750.040*
H15B0.03580.20390.57040.040*
H15C0.01380.06030.63020.040*
U11U22U33U12U13U23
S10.0312 (4)0.0264 (4)0.0297 (4)0.0058 (3)−0.0006 (3)−0.0016 (3)
F10.0697 (13)0.0316 (9)0.0346 (10)0.0099 (8)−0.0174 (9)−0.0094 (7)
F20.0327 (10)0.0317 (10)0.122 (2)−0.0050 (8)0.0302 (11)0.0038 (11)
F30.0843 (17)0.0847 (17)0.0741 (15)0.0586 (14)−0.0430 (13)−0.0557 (13)
N10.0378 (15)0.0602 (18)0.0466 (16)−0.0076 (13)−0.0110 (12)0.0141 (14)
C10.0246 (12)0.0227 (12)0.0283 (13)0.0003 (10)0.0023 (10)0.0013 (10)
C20.0240 (12)0.0234 (12)0.0269 (13)0.0005 (10)0.0017 (10)0.0004 (10)
C30.0232 (12)0.0235 (13)0.0263 (13)−0.0004 (10)0.0012 (10)0.0023 (10)
C40.0277 (13)0.0263 (13)0.0268 (13)0.0018 (10)0.0012 (10)0.0016 (11)
C50.0233 (12)0.0221 (12)0.0289 (13)−0.0006 (10)0.0016 (10)0.0044 (10)
C60.0272 (13)0.0262 (13)0.0306 (14)0.0038 (10)0.0011 (10)0.0026 (11)
C70.0357 (15)0.0266 (14)0.0292 (14)−0.0003 (11)−0.0012 (11)0.0032 (11)
C80.0260 (13)0.0267 (13)0.0324 (14)−0.0014 (10)−0.0023 (11)0.0096 (11)
C90.0229 (13)0.0280 (14)0.0366 (15)0.0022 (10)0.0022 (11)0.0064 (11)
C100.0282 (13)0.0275 (13)0.0301 (14)0.0022 (10)0.0033 (11)0.0025 (11)
C110.0304 (14)0.0348 (15)0.0393 (16)−0.0022 (12)0.0007 (13)0.0072 (13)
C120.0249 (12)0.0219 (12)0.0216 (12)−0.0018 (10)0.0032 (10)0.0007 (10)
C130.0218 (13)0.0261 (13)0.0342 (14)−0.0021 (10)0.0027 (11)−0.0006 (11)
C140.038 (2)0.0211 (18)0.032 (2)0.000−0.0003 (16)0.000
C150.0375 (15)0.0310 (15)0.0292 (14)0.0076 (12)−0.0038 (12)−0.0051 (12)
S1—C41.724 (3)C6—H60.9500
S1—C11.732 (3)C7—C81.392 (4)
F1—C131.363 (3)C7—H70.9500
F2—C131.341 (3)C8—C91.390 (4)
F3—C141.331 (3)C8—C111.446 (4)
N1—C111.144 (4)C9—C101.384 (4)
C1—C21.367 (4)C9—H90.9500
C1—C51.465 (3)C10—H100.9500
C2—C31.427 (4)C12—C12i1.354 (5)
C2—H20.9500C12—C131.502 (3)
C3—C41.380 (4)C13—C141.531 (3)
C3—C121.467 (3)C14—F3i1.331 (3)
C4—C151.493 (4)C14—C13i1.531 (3)
C5—C61.389 (4)C15—H15A0.9800
C5—C101.402 (4)C15—H15B0.9800
C6—C71.380 (4)C15—H15C0.9800
C4—S1—C193.15 (13)C8—C9—H9120.3
C2—C1—C5127.3 (2)C9—C10—C5120.8 (3)
C2—C1—S1110.0 (2)C9—C10—H10119.6
C5—C1—S1122.54 (19)C5—C10—H10119.6
C1—C2—C3113.8 (2)N1—C11—C8177.0 (3)
C1—C2—H2123.1C12i—C12—C3131.76 (14)
C3—C2—H2123.1C12i—C12—C13110.66 (14)
C4—C3—C2112.6 (2)C3—C12—C13117.6 (2)
C4—C3—C12125.3 (2)F2—C13—F1104.8 (2)
C2—C3—C12121.7 (2)F2—C13—C12113.5 (2)
C3—C4—C15130.6 (2)F1—C13—C12111.3 (2)
C3—C4—S1110.39 (19)F2—C13—C14112.1 (2)
C15—C4—S1118.9 (2)F1—C13—C14108.70 (19)
C6—C5—C10118.7 (2)C12—C13—C14106.5 (2)
C6—C5—C1119.6 (2)F3i—C14—F3108.2 (4)
C10—C5—C1121.6 (2)F3i—C14—C13i111.45 (14)
C7—C6—C5120.9 (2)F3—C14—C13i110.49 (15)
C7—C6—H6119.5F3i—C14—C13110.49 (15)
C5—C6—H6119.5F3—C14—C13111.45 (14)
C6—C7—C8119.8 (3)C13i—C14—C13104.8 (3)
C6—C7—H7120.1C4—C15—H15A109.5
C8—C7—H7120.1C4—C15—H15B109.5
C9—C8—C7120.3 (2)H15A—C15—H15B109.5
C9—C8—C11120.5 (2)C4—C15—H15C109.5
C7—C8—C11119.2 (3)H15A—C15—H15C109.5
C10—C9—C8119.4 (2)H15B—C15—H15C109.5
C10—C9—H9120.3
C4—S1—C1—C20.4 (2)C8—C9—C10—C51.1 (4)
C4—S1—C1—C5−176.3 (2)C6—C5—C10—C9−1.2 (4)
C5—C1—C2—C3176.4 (2)C1—C5—C10—C9175.4 (2)
S1—C1—C2—C3−0.1 (3)C4—C3—C12—C12i37.9 (5)
C1—C2—C3—C4−0.3 (3)C2—C3—C12—C12i−149.8 (3)
C1—C2—C3—C12−173.6 (2)C4—C3—C12—C13−140.0 (3)
C2—C3—C4—C15−176.1 (3)C2—C3—C12—C1332.3 (3)
C12—C3—C4—C15−3.2 (5)C12i—C12—C13—F2−131.7 (3)
C2—C3—C4—S10.6 (3)C3—C12—C13—F246.7 (3)
C12—C3—C4—S1173.5 (2)C12i—C12—C13—F1110.5 (3)
C1—S1—C4—C3−0.6 (2)C3—C12—C13—F1−71.2 (3)
C1—S1—C4—C15176.6 (2)C12i—C12—C13—C14−7.9 (3)
C2—C1—C5—C621.9 (4)C3—C12—C13—C14170.46 (19)
S1—C1—C5—C6−162.0 (2)F2—C13—C14—F3i7.2 (3)
C2—C1—C5—C10−154.7 (3)F1—C13—C14—F3i122.5 (2)
S1—C1—C5—C1021.4 (3)C12—C13—C14—F3i−117.5 (3)
C10—C5—C6—C70.6 (4)F2—C13—C14—F3−113.2 (3)
C1—C5—C6—C7−176.0 (2)F1—C13—C14—F32.2 (3)
C5—C6—C7—C80.0 (4)C12—C13—C14—F3122.2 (3)
C6—C7—C8—C9−0.1 (4)F2—C13—C14—C13i127.3 (3)
C6—C7—C8—C11−179.4 (3)F1—C13—C14—C13i−117.3 (2)
C7—C8—C9—C10−0.4 (4)C12—C13—C14—C13i2.69 (11)
C11—C8—C9—C10178.9 (2)
  3 in total

1.  Diarylethenes for Memories and Switches.

Authors:  Masahiro Irie
Journal:  Chem Rev       Date:  2000-05-10       Impact factor: 60.622

2.  1-(2-Methyl-5-phenyl-3-thienyl)-2-(3-methyl-5-phenyl-2-thienyl)-3,3,4,4,5,5-hexafluorocyclopent-1-ene: a novel photochromic hybrid diarylethene.

Authors:  Shou-Zhi Pu; Gang Liu; Bing Chen; Ru-Ji Wang
Journal:  Acta Crystallogr C       Date:  2005-09-17       Impact factor: 1.172

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  3 in total
  2 in total

1.  3,3,4,4,5,5-Hexafluoro-1,2-bis-(5-formyl-2-methylsulfanyl-3-thienyl)cyclo-pent-1-ene.

Authors:  Qidong Tu; Congbin Fan; Gang Liu; Min Li; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-07

2.  5-n-Butyl-4-[2-(2-ethyl-1-benzothio-phen-3-yl)-3,3,4,4,5,5-hexa-fluoro-cyclo-pent-1-en-1-yl]thio-phene-2-carbaldehyde.

Authors:  Zhen Yang; Congbin Fan; Min Li; Weijun Liu; Gang Liu; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-13
  2 in total

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