Literature DB >> 21202402

N'-(5-Fluoro-2-oxo-2,3-dihydro-1H-indol-3-yl-idene)benzene-sulfono-hydrazide.

Hapipah M Ali1, Musalem Laila, Mohd Razali Rizal, Seik Weng Ng.   

Abstract

The mol-ecule of the title compound, C(14)H(10)FN(3)O(3)S, consists of an indole unit and a phenylsulfonyl unit that are disposed in an approximately trans orientation relative to the N-N single bond. Two mol-ecules are arranged about a center of inversion, forming a hydrazide-carbonyl N-H⋯O hydrogen-bonded dimer; the dimers are linked by an indole-sulfonyl N-H⋯O hydrogen bond into a ribbon.

Entities:  

Year:  2008        PMID: 21202402      PMCID: PMC2961184          DOI: 10.1107/S1600536808011136

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of related 3-indole benzene­sulfonyl­hydrazones, see: Ali et al. (2007a ▶,b ▶,c ▶). For the crystal structure of 5-fluoro-1H-indole-2,3-dione, see: Naumov et al. (2000 ▶).

Experimental

Crystal data

C14H10FN3O3S M = 319.31 Monoclinic, a = 8.2218 (2) Å b = 16.4933 (3) Å c = 10.8585 (2) Å β = 110.249 (1)° V = 1381.46 (5) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 123 (2) K 0.50 × 0.20 × 0.15 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.816, T max = 0.962 10513 measured reflections 3166 independent reflections 2741 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.145 S = 1.20 3166 reflections 207 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.54 e Å−3 Δρmin = −0.59 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808011136/sg2224sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808011136/sg2224Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H10FN3O3SF000 = 656
Mr = 319.31Dx = 1.535 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6063 reflections
a = 8.2218 (2) Åθ = 3.0–31.3º
b = 16.4933 (3) ŵ = 0.26 mm1
c = 10.8585 (2) ÅT = 123 (2) K
β = 110.249 (1)ºIrregular block, yellow
V = 1381.46 (5) Å30.50 × 0.20 × 0.15 mm
Z = 4
Bruker SMART APEX diffractometer3166 independent reflections
Radiation source: medium-focus sealed tube2741 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.024
T = 123(2) Kθmax = 27.5º
φ and ω scansθmin = 2.4º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.816, Tmax = 0.962k = −21→21
10513 measured reflectionsl = −13→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.145  w = 1/[σ2(Fo2) + (0.0922P)2 + 0.2432P] where P = (Fo2 + 2Fc2)/3
S = 1.20(Δ/σ)max = 0.001
3166 reflectionsΔρmax = 0.54 e Å3
207 parametersΔρmin = −0.59 e Å3
2 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Experimental. A medium-focus collimator of 0.8 mm diameter was used on the diffractometer to measure the somewhat large crystal.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
S10.65386 (5)0.28692 (2)0.54366 (4)0.01609 (16)
O10.61921 (18)0.21966 (7)0.61409 (14)0.0248 (3)
O20.56524 (17)0.29375 (8)0.40497 (13)0.0255 (3)
O30.42474 (17)0.51614 (8)0.60498 (13)0.0240 (3)
N10.59808 (19)0.37034 (9)0.60384 (14)0.0183 (3)
H1N0.557 (3)0.4089 (11)0.546 (2)0.036 (7)*
N20.67998 (18)0.38149 (8)0.73560 (14)0.0172 (3)
N30.5337 (2)0.57008 (9)0.81558 (16)0.0232 (3)
H3N0.478 (3)0.6168 (9)0.799 (2)0.038 (7)*
C10.8794 (2)0.29132 (9)0.58025 (17)0.0165 (3)
C20.9467 (3)0.33843 (13)0.50285 (19)0.0277 (4)
H20.87300.36960.43180.033*
C31.1256 (3)0.33841 (16)0.5329 (2)0.0368 (5)
H31.17540.37030.48230.044*
C41.2315 (3)0.29211 (13)0.6361 (2)0.0349 (5)
H41.35300.29140.65410.042*
C51.1624 (2)0.24721 (12)0.7127 (2)0.0300 (4)
H51.23640.21640.78410.036*
C60.9846 (2)0.24692 (10)0.68578 (19)0.0227 (4)
H60.93600.21670.73900.027*
C70.6472 (2)0.44753 (10)0.78623 (17)0.0174 (3)
C80.7275 (2)0.47125 (10)0.92317 (17)0.0182 (4)
C90.8561 (2)0.43576 (10)1.02774 (17)0.0219 (4)
H90.90690.38531.01920.026*
C100.9065 (3)0.47769 (11)1.14518 (18)0.0252 (4)
C110.8372 (3)0.55171 (11)1.16168 (19)0.0285 (4)
H110.87650.57791.24470.034*
C120.7090 (3)0.58763 (11)1.05538 (19)0.0276 (4)
H120.65970.63851.06410.033*
C130.6564 (2)0.54660 (10)0.93715 (18)0.0204 (4)
C140.5206 (2)0.51454 (10)0.72023 (17)0.0187 (4)
F11.03509 (17)0.44573 (7)1.25055 (11)0.0374 (3)
U11U22U33U12U13U23
S10.0133 (2)0.0151 (2)0.0192 (3)−0.00149 (13)0.00483 (17)−0.00402 (14)
O10.0232 (7)0.0164 (6)0.0388 (8)−0.0042 (5)0.0157 (6)−0.0018 (5)
O20.0199 (7)0.0309 (7)0.0207 (7)−0.0001 (5)0.0006 (5)−0.0086 (5)
O30.0257 (7)0.0238 (6)0.0195 (6)0.0050 (5)0.0039 (5)−0.0003 (5)
N10.0202 (7)0.0158 (7)0.0180 (7)0.0032 (5)0.0053 (6)−0.0009 (5)
N20.0179 (7)0.0163 (7)0.0179 (7)−0.0007 (5)0.0069 (6)−0.0010 (5)
N30.0250 (8)0.0194 (7)0.0219 (8)0.0074 (6)0.0039 (6)−0.0024 (6)
C10.0132 (8)0.0191 (8)0.0172 (8)−0.0017 (6)0.0053 (6)−0.0053 (6)
C20.0251 (9)0.0409 (11)0.0185 (9)−0.0057 (8)0.0093 (7)0.0000 (8)
C30.0284 (10)0.0596 (14)0.0287 (11)−0.0140 (10)0.0178 (9)−0.0058 (10)
C40.0153 (9)0.0477 (13)0.0424 (12)−0.0030 (8)0.0108 (9)−0.0180 (10)
C50.0196 (9)0.0262 (10)0.0370 (11)0.0035 (7)0.0005 (8)−0.0062 (8)
C60.0202 (8)0.0180 (8)0.0269 (9)0.0000 (6)0.0042 (7)0.0001 (7)
C70.0182 (8)0.0154 (7)0.0191 (8)0.0007 (6)0.0072 (7)0.0000 (6)
C80.0223 (8)0.0144 (7)0.0183 (8)−0.0007 (6)0.0076 (7)−0.0013 (6)
C90.0266 (9)0.0166 (8)0.0207 (9)0.0012 (6)0.0059 (7)0.0019 (6)
C100.0287 (9)0.0225 (9)0.0197 (9)−0.0010 (7)0.0023 (7)0.0037 (7)
C110.0364 (11)0.0251 (9)0.0202 (9)−0.0022 (8)0.0052 (8)−0.0058 (7)
C120.0327 (10)0.0217 (9)0.0251 (10)0.0039 (8)0.0059 (8)−0.0073 (7)
C130.0216 (8)0.0180 (8)0.0206 (9)0.0019 (6)0.0060 (7)−0.0008 (6)
C140.0184 (8)0.0172 (8)0.0206 (9)0.0016 (6)0.0069 (7)0.0005 (6)
F10.0471 (8)0.0298 (6)0.0211 (6)0.0055 (5)−0.0061 (5)0.0026 (5)
S1—O11.4309 (13)C4—C51.375 (3)
S1—O21.4325 (14)C4—H40.9500
S1—N11.6545 (14)C5—C61.388 (3)
S1—C11.7582 (17)C5—H50.9500
O3—C141.227 (2)C6—H60.9500
N1—N21.367 (2)C7—C81.456 (2)
N1—H1N0.876 (10)C7—C141.518 (2)
N2—C71.290 (2)C8—C91.385 (2)
N3—C141.358 (2)C8—C131.404 (2)
N3—C131.410 (2)C9—C101.382 (3)
N3—H3N0.884 (10)C9—H90.9500
C1—C61.383 (2)C10—F11.366 (2)
C1—C21.392 (3)C10—C111.385 (3)
C2—C31.392 (3)C11—C121.397 (3)
C2—H20.9500C11—H110.9500
C3—C41.386 (3)C12—C131.382 (3)
C3—H30.9500C12—H120.9500
O1—S1—O2119.99 (8)C1—C6—C5118.97 (18)
O1—S1—N1107.46 (8)C1—C6—H6120.5
O2—S1—N1103.90 (8)C5—C6—H6120.5
O1—S1—C1107.50 (8)N2—C7—C8125.06 (15)
O2—S1—C1110.32 (8)N2—C7—C14128.61 (16)
N1—S1—C1106.93 (7)C8—C7—C14106.32 (14)
N2—N1—S1114.96 (11)C9—C8—C13120.91 (16)
N2—N1—H1N125.5 (17)C9—C8—C7132.16 (16)
S1—N1—H1N114.2 (17)C13—C8—C7106.84 (15)
C7—N2—N1117.39 (14)C10—C9—C8116.43 (16)
C14—N3—C13111.76 (15)C10—C9—H9121.8
C14—N3—H3N122.4 (17)C8—C9—H9121.8
C13—N3—H3N125.6 (17)F1—C10—C9118.54 (17)
C6—C1—C2122.02 (17)F1—C10—C11117.74 (17)
C6—C1—S1118.29 (14)C9—C10—C11123.70 (17)
C2—C1—S1119.69 (14)C10—C11—C12119.57 (17)
C1—C2—C3117.85 (19)C10—C11—H11120.2
C1—C2—H2121.1C12—C11—H11120.2
C3—C2—H2121.1C13—C12—C11117.64 (17)
C4—C3—C2120.4 (2)C13—C12—H12121.2
C4—C3—H3119.8C11—C12—H12121.2
C2—C3—H3119.8C12—C13—C8121.74 (17)
C5—C4—C3120.72 (19)C12—C13—N3128.89 (16)
C5—C4—H4119.6C8—C13—N3109.37 (15)
C3—C4—H4119.6O3—C14—N3128.06 (16)
C4—C5—C6119.97 (19)O3—C14—C7126.22 (15)
C4—C5—H5120.0N3—C14—C7105.70 (15)
C6—C5—H5120.0
O1—S1—N1—N257.51 (14)C14—C7—C8—C13−0.74 (19)
O2—S1—N1—N2−174.35 (12)C13—C8—C9—C101.2 (3)
C1—S1—N1—N2−57.66 (14)C7—C8—C9—C10177.29 (18)
S1—N1—N2—C7176.78 (12)C8—C9—C10—F1−178.89 (16)
O1—S1—C1—C6−14.56 (16)C8—C9—C10—C11−0.6 (3)
O2—S1—C1—C6−147.07 (13)F1—C10—C11—C12178.16 (18)
N1—S1—C1—C6100.57 (14)C9—C10—C11—C12−0.1 (3)
O1—S1—C1—C2165.08 (14)C10—C11—C12—C130.3 (3)
O2—S1—C1—C232.58 (16)C11—C12—C13—C80.3 (3)
N1—S1—C1—C2−79.78 (16)C11—C12—C13—N3−178.45 (19)
C6—C1—C2—C31.4 (3)C9—C8—C13—C12−1.1 (3)
S1—C1—C2—C3−178.20 (16)C7—C8—C13—C12−178.09 (17)
C1—C2—C3—C40.5 (3)C9—C8—C13—N3177.87 (16)
C2—C3—C4—C5−1.8 (3)C7—C8—C13—N30.9 (2)
C3—C4—C5—C61.0 (3)C14—N3—C13—C12178.14 (19)
C2—C1—C6—C5−2.2 (3)C14—N3—C13—C8−0.8 (2)
S1—C1—C6—C5177.47 (14)C13—N3—C14—O3178.88 (18)
C4—C5—C6—C10.9 (3)C13—N3—C14—C70.3 (2)
N1—N2—C7—C8−177.31 (15)N2—C7—C14—O30.9 (3)
N1—N2—C7—C143.5 (3)C8—C7—C14—O3−178.35 (17)
N2—C7—C8—C93.5 (3)N2—C7—C14—N3179.59 (17)
C14—C7—C8—C9−177.21 (18)C8—C7—C14—N30.29 (19)
N2—C7—C8—C13179.93 (17)
D—H···AD—HH···AD···AD—H···A
N1—H1n···O3i0.88 (1)2.10 (2)2.896 (2)151 (2)
N3—H3n···O1ii0.88 (1)2.22 (2)2.986 (2)145 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1n⋯O3i0.88 (1)2.10 (2)2.896 (2)151 (2)
N3—H3n⋯O1ii0.88 (1)2.22 (2)2.986 (2)145 (2)

Symmetry codes: (i) ; (ii) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  2 in total

1.  (E)-5-Chloro-3-(2,6-dichloro-benzyl-idene)-indolin-2-one.

Authors:  Hongming Zhang; Haribabu Ankati; Shashidhar Kumar Akubathini; Ed Biehl
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-11

2.  (Z)-5-Fluoro-3-[(1H-pyrrol-2-yl)methyl-ene]indolin-2-one.

Authors:  Hongming Zhang; Haribabu Ankati; Shashidhar Kumar Akubathini; Ed Biehl
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-12-03
  2 in total

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