| Literature DB >> 21202375 |
Rana Shabnam Habib, Muhammad Jamshaid, M Nawaz Tahir, Tahir Javed Khan, Islam Ullah Khan.
Abstract
The title compound, C(20)H(26)O(4), was extracted from Leucas Urticifolia, a wild Lamiaceae herb distributed in the Punjab, Baluchistan, Sindh and the Rajputana desert of Pakistan. The plant is utilized for various medicinal applications by the local community. The title compound is based on the pimarane-diterpene skeleton. The mol-ecule exhibits an ep-oxy ring fused to momilactone-A, leading to a penta-cyclic mol-ecular structure. The absolute configuration was assigned by comparison with the crystal structure of momilactone, but needs further verification. The crystal structure is governed by four inter-molecular hydrogen-bond inter-actions of the C-H⋯O type.Entities:
Year: 2008 PMID: 21202375 PMCID: PMC2961202 DOI: 10.1107/S1600536808010556
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H26O4 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 1295 reflections |
| θ = 1.6–28.6º | |
| µ = 0.09 mm−1 | |
| Needle, colourless | |
| 0.25 × 0.10 × 0.09 mm |
| Bruker Kappa APEX2 CCD diffractometer | 2635 independent reflections |
| Radiation source: fine-focus sealed tube | 1202 reflections with |
| Monochromator: graphite | |
| Detector resolution: 7.30 pixels mm-1 | θmax = 28.9º |
| θmin = 2.5º | |
| ω scans | |
| Absorption correction: multi-scan(SADABS; Bruker, 2005) | |
| 19288 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 2635 reflections | Δρmax = 0.14 e Å−3 |
| 223 parameters | Δρmin = −0.17 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: ? |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.2901 (4) | 0.5384 (2) | 0.77739 (11) | 0.1276 (11) | |
| O2 | 0.6901 (4) | 0.54820 (17) | 0.70678 (11) | 0.0895 (7) | |
| O3 | 0.6511 (3) | 0.64702 (13) | 0.62196 (9) | 0.0641 (5) | |
| O4 | 0.4101 (3) | 0.82859 (12) | 0.50957 (8) | 0.0624 (5) | |
| C1 | 0.0673 (4) | 0.7697 (2) | 0.70647 (13) | 0.0687 (8) | |
| H1A | −0.0511 | 0.7524 | 0.6796 | 0.082* | |
| H1B | 0.0347 | 0.8324 | 0.7288 | 0.082* | |
| C2 | 0.1031 (5) | 0.6849 (2) | 0.75567 (14) | 0.0848 (10) | |
| H2A | 0.1551 | 0.7159 | 0.7947 | 0.102* | |
| H2B | −0.0316 | 0.6551 | 0.7657 | 0.102* | |
| C3 | 0.2466 (5) | 0.6019 (3) | 0.73828 (15) | 0.0739 (9) | |
| C4 | 0.3374 (5) | 0.5948 (2) | 0.67075 (12) | 0.0577 (7) | |
| C5 | 0.2923 (4) | 0.68587 (18) | 0.62796 (11) | 0.0499 (7) | |
| H5 | 0.1673 | 0.6716 | 0.6024 | 0.060* | |
| C6 | 0.4805 (4) | 0.68849 (19) | 0.58381 (11) | 0.0553 (7) | |
| H6 | 0.4545 | 0.6434 | 0.5473 | 0.066* | |
| C7 | 0.5436 (4) | 0.7907 (2) | 0.55901 (11) | 0.0535 (7) | |
| H7 | 0.6937 | 0.8028 | 0.5537 | 0.064* | |
| C8 | 0.4140 (4) | 0.87944 (18) | 0.57182 (11) | 0.0462 (6) | |
| C9 | 0.2192 (4) | 0.86667 (18) | 0.61280 (11) | 0.0459 (6) | |
| H9 | 0.1100 | 0.8397 | 0.5846 | 0.055* | |
| C10 | 0.2590 (4) | 0.78561 (18) | 0.66466 (11) | 0.0449 (6) | |
| C11 | 0.1424 (5) | 0.9704 (2) | 0.63641 (13) | 0.0654 (8) | |
| H11A | 0.0037 | 0.9639 | 0.6547 | 0.078* | |
| H11B | 0.2354 | 0.9960 | 0.6694 | 0.078* | |
| C12 | 0.1373 (5) | 1.0436 (2) | 0.57995 (14) | 0.0672 (8) | |
| H12A | 0.0686 | 1.1058 | 0.5932 | 0.081* | |
| H12B | 0.0551 | 1.0139 | 0.5457 | 0.081* | |
| C13 | 0.3552 (5) | 1.06931 (19) | 0.55425 (14) | 0.0631 (8) | |
| C14 | 0.5096 (4) | 0.98319 (19) | 0.57133 (14) | 0.0608 (8) | |
| H14A | 0.6235 | 0.9839 | 0.5406 | 0.073* | |
| H14B | 0.5684 | 0.9968 | 0.6133 | 0.073* | |
| C15 | 0.3421 (6) | 1.0775 (3) | 0.48310 (17) | 0.0956 (12) | |
| H15 | 0.3070 | 1.0178 | 0.4619 | 0.115* | |
| C16 | 0.3716 (10) | 1.1536 (5) | 0.4474 (3) | 0.171 (3) | |
| C17 | 0.4321 (6) | 1.1672 (2) | 0.5862 (2) | 0.1304 (16) | |
| H17A | 0.4403 | 1.1573 | 0.6317 | 0.196* | |
| H17B | 0.3363 | 1.2213 | 0.5770 | 0.196* | |
| H17C | 0.5679 | 1.1843 | 0.5699 | 0.196* | |
| C18 | 0.5739 (5) | 0.5923 (2) | 0.67153 (14) | 0.0635 (8) | |
| C19 | 0.2609 (7) | 0.4944 (2) | 0.64183 (16) | 0.1028 (13) | |
| H19A | 0.1109 | 0.4939 | 0.6409 | 0.154* | |
| H19B | 0.3099 | 0.4389 | 0.6675 | 0.154* | |
| H19C | 0.3139 | 0.4876 | 0.5990 | 0.154* | |
| C20 | 0.4458 (4) | 0.81615 (19) | 0.70649 (11) | 0.0535 (7) | |
| H20A | 0.5665 | 0.8259 | 0.6799 | 0.080* | |
| H20B | 0.4735 | 0.7635 | 0.7372 | 0.080* | |
| H20C | 0.4143 | 0.8782 | 0.7286 | 0.080* | |
| H16A | 0.378 (5) | 1.143 (2) | 0.4045 (13) | 0.080* | |
| H16B | 0.397 (5) | 1.214 (2) | 0.4727 (13) | 0.080* |
| O1 | 0.124 (2) | 0.153 (2) | 0.1054 (19) | 0.0407 (19) | 0.0296 (18) | 0.0790 (18) |
| O2 | 0.0755 (17) | 0.0982 (17) | 0.0950 (15) | 0.0171 (13) | −0.0114 (13) | 0.0445 (13) |
| O3 | 0.0669 (13) | 0.0666 (12) | 0.0588 (11) | 0.0172 (10) | 0.0070 (11) | 0.0134 (10) |
| O4 | 0.0828 (15) | 0.0634 (12) | 0.0409 (10) | 0.0064 (10) | −0.0036 (9) | 0.0013 (9) |
| C1 | 0.0527 (19) | 0.082 (2) | 0.0713 (19) | −0.0007 (16) | 0.0122 (16) | 0.0101 (18) |
| C2 | 0.072 (2) | 0.105 (3) | 0.078 (2) | −0.011 (2) | 0.0138 (18) | 0.028 (2) |
| C3 | 0.061 (2) | 0.084 (2) | 0.077 (2) | −0.0048 (19) | −0.0003 (18) | 0.0255 (19) |
| C4 | 0.063 (2) | 0.0541 (17) | 0.0558 (18) | −0.0116 (16) | −0.0113 (16) | 0.0105 (14) |
| C5 | 0.0542 (18) | 0.0468 (16) | 0.0487 (14) | −0.0096 (13) | −0.0153 (13) | 0.0047 (13) |
| C6 | 0.074 (2) | 0.0522 (18) | 0.0399 (14) | 0.0088 (15) | −0.0037 (15) | −0.0001 (13) |
| C7 | 0.0567 (18) | 0.0583 (18) | 0.0455 (15) | 0.0058 (14) | 0.0061 (14) | 0.0049 (13) |
| C8 | 0.0454 (16) | 0.0496 (16) | 0.0435 (14) | 0.0008 (13) | −0.0021 (13) | −0.0003 (12) |
| C9 | 0.0398 (16) | 0.0517 (16) | 0.0462 (14) | 0.0009 (12) | −0.0024 (13) | 0.0008 (13) |
| C10 | 0.0387 (15) | 0.0545 (17) | 0.0415 (13) | −0.0029 (12) | −0.0001 (13) | −0.0006 (13) |
| C11 | 0.064 (2) | 0.0643 (18) | 0.0679 (19) | 0.0148 (17) | 0.0105 (16) | −0.0003 (16) |
| C12 | 0.069 (2) | 0.0561 (18) | 0.076 (2) | 0.0125 (16) | 0.0017 (18) | 0.0033 (15) |
| C13 | 0.059 (2) | 0.0462 (18) | 0.084 (2) | −0.0008 (15) | −0.0015 (17) | 0.0065 (16) |
| C14 | 0.0503 (18) | 0.0530 (18) | 0.0792 (19) | −0.0029 (14) | −0.0015 (17) | 0.0058 (15) |
| C15 | 0.098 (3) | 0.087 (3) | 0.102 (3) | 0.030 (2) | 0.018 (2) | 0.046 (2) |
| C16 | 0.207 (6) | 0.156 (5) | 0.150 (5) | 0.099 (5) | 0.068 (5) | 0.061 (4) |
| C17 | 0.125 (4) | 0.053 (2) | 0.213 (5) | −0.012 (2) | −0.034 (3) | −0.014 (3) |
| C18 | 0.075 (2) | 0.0528 (18) | 0.0624 (19) | 0.0052 (17) | −0.0019 (19) | 0.0097 (16) |
| C19 | 0.132 (3) | 0.054 (2) | 0.123 (3) | −0.0241 (19) | −0.047 (3) | 0.0172 (19) |
| C20 | 0.0569 (18) | 0.0573 (17) | 0.0462 (14) | −0.0039 (14) | −0.0069 (13) | −0.0065 (13) |
| O1—C3 | 1.201 (3) | C9—C10 | 1.541 (3) |
| O2—C18 | 1.196 (3) | C9—H9 | 0.9800 |
| O3—C18 | 1.354 (3) | C10—C20 | 1.534 (3) |
| O3—C6 | 1.457 (3) | C11—C12 | 1.523 (3) |
| O4—C7 | 1.429 (3) | C11—H11A | 0.9700 |
| O4—C8 | 1.461 (3) | C11—H11B | 0.9700 |
| C1—C10 | 1.519 (3) | C12—C13 | 1.532 (4) |
| C1—C2 | 1.534 (4) | C12—H12A | 0.9700 |
| C1—H1A | 0.9700 | C12—H12B | 0.9700 |
| C1—H1B | 0.9700 | C13—C15 | 1.490 (4) |
| C2—C3 | 1.474 (4) | C13—C17 | 1.533 (4) |
| C2—H2A | 0.9700 | C13—C14 | 1.546 (4) |
| C2—H2B | 0.9700 | C14—H14A | 0.9700 |
| C3—C4 | 1.526 (4) | C14—H14B | 0.9700 |
| C4—C18 | 1.514 (4) | C15—C16 | 1.263 (6) |
| C4—C5 | 1.523 (3) | C15—H15 | 0.9300 |
| C4—C19 | 1.534 (4) | C16—H16A | 0.91 (2) |
| C5—C6 | 1.516 (4) | C16—H16B | 0.97 (2) |
| C5—C10 | 1.536 (3) | C17—H17A | 0.9600 |
| C5—H5 | 0.9800 | C17—H17B | 0.9600 |
| C6—C7 | 1.499 (3) | C17—H17C | 0.9600 |
| C6—H6 | 0.9800 | C19—H19A | 0.9600 |
| C7—C8 | 1.458 (3) | C19—H19B | 0.9600 |
| C7—H7 | 0.9800 | C19—H19C | 0.9600 |
| C8—C14 | 1.498 (3) | C20—H20A | 0.9600 |
| C8—C9 | 1.521 (3) | C20—H20B | 0.9600 |
| C9—C11 | 1.533 (3) | C20—H20C | 0.9600 |
| C18—O3—C6 | 110.1 (2) | C20—C10—C5 | 113.6 (2) |
| C7—O4—C8 | 60.57 (15) | C1—C10—C9 | 111.4 (2) |
| C10—C1—C2 | 111.3 (2) | C20—C10—C9 | 110.3 (2) |
| C10—C1—H1A | 109.4 | C5—C10—C9 | 105.44 (18) |
| C2—C1—H1A | 109.4 | C12—C11—C9 | 108.9 (2) |
| C10—C1—H1B | 109.4 | C12—C11—H11A | 109.9 |
| C2—C1—H1B | 109.4 | C9—C11—H11A | 109.9 |
| H1A—C1—H1B | 108.0 | C12—C11—H11B | 109.9 |
| C3—C2—C1 | 118.0 (3) | C9—C11—H11B | 109.9 |
| C3—C2—H2A | 107.8 | H11A—C11—H11B | 108.3 |
| C1—C2—H2A | 107.8 | C11—C12—C13 | 113.0 (2) |
| C3—C2—H2B | 107.8 | C11—C12—H12A | 109.0 |
| C1—C2—H2B | 107.8 | C13—C12—H12A | 109.0 |
| H2A—C2—H2B | 107.1 | C11—C12—H12B | 109.0 |
| O1—C3—C2 | 119.6 (3) | C13—C12—H12B | 109.0 |
| O1—C3—C4 | 119.7 (3) | H12A—C12—H12B | 107.8 |
| C2—C3—C4 | 120.6 (3) | C15—C13—C12 | 108.3 (3) |
| C18—C4—C5 | 102.3 (2) | C15—C13—C17 | 112.9 (3) |
| C18—C4—C3 | 111.8 (2) | C12—C13—C17 | 109.0 (3) |
| C5—C4—C3 | 114.9 (2) | C15—C13—C14 | 108.6 (2) |
| C18—C4—C19 | 107.7 (3) | C12—C13—C14 | 109.8 (2) |
| C5—C4—C19 | 112.9 (2) | C17—C13—C14 | 108.2 (3) |
| C3—C4—C19 | 107.1 (3) | C8—C14—C13 | 114.2 (2) |
| C6—C5—C4 | 102.9 (2) | C8—C14—H14A | 108.7 |
| C6—C5—C10 | 113.2 (2) | C13—C14—H14A | 108.7 |
| C4—C5—C10 | 114.10 (19) | C8—C14—H14B | 108.7 |
| C6—C5—H5 | 108.8 | C13—C14—H14B | 108.7 |
| C4—C5—H5 | 108.8 | H14A—C14—H14B | 107.6 |
| C10—C5—H5 | 108.8 | C16—C15—C13 | 129.5 (5) |
| O3—C6—C7 | 108.9 (2) | C16—C15—H15 | 115.2 |
| O3—C6—C5 | 104.77 (18) | C13—C15—H15 | 115.2 |
| C7—C6—C5 | 116.4 (2) | C15—C16—H16A | 118 (2) |
| O3—C6—H6 | 108.9 | C15—C16—H16B | 111 (2) |
| C7—C6—H6 | 108.9 | H16A—C16—H16B | 131 (3) |
| C5—C6—H6 | 108.9 | C13—C17—H17A | 109.5 |
| O4—C7—C8 | 60.81 (15) | C13—C17—H17B | 109.5 |
| O4—C7—C6 | 113.7 (2) | H17A—C17—H17B | 109.5 |
| C8—C7—C6 | 120.3 (2) | C13—C17—H17C | 109.5 |
| O4—C7—H7 | 116.7 | H17A—C17—H17C | 109.5 |
| C8—C7—H7 | 116.7 | H17B—C17—H17C | 109.5 |
| C6—C7—H7 | 116.7 | O2—C18—O3 | 120.1 (3) |
| C7—C8—O4 | 58.63 (14) | O2—C18—C4 | 129.7 (3) |
| C7—C8—C14 | 119.9 (2) | O3—C18—C4 | 110.2 (3) |
| O4—C8—C14 | 114.8 (2) | C4—C19—H19A | 109.5 |
| C7—C8—C9 | 118.7 (2) | C4—C19—H19B | 109.5 |
| O4—C8—C9 | 115.74 (19) | H19A—C19—H19B | 109.5 |
| C14—C8—C9 | 116.1 (2) | C4—C19—H19C | 109.5 |
| C8—C9—C11 | 110.2 (2) | H19A—C19—H19C | 109.5 |
| C8—C9—C10 | 109.59 (19) | H19B—C19—H19C | 109.5 |
| C11—C9—C10 | 116.4 (2) | C10—C20—H20A | 109.5 |
| C8—C9—H9 | 106.7 | C10—C20—H20B | 109.5 |
| C11—C9—H9 | 106.7 | H20A—C20—H20B | 109.5 |
| C10—C9—H9 | 106.7 | C10—C20—H20C | 109.5 |
| C1—C10—C20 | 109.82 (19) | H20A—C20—H20C | 109.5 |
| C1—C10—C5 | 106.3 (2) | H20B—C20—H20C | 109.5 |
| C10—C1—C2—C3 | −30.0 (4) | C2—C1—C10—C20 | −60.7 (3) |
| C1—C2—C3—O1 | 174.5 (3) | C2—C1—C10—C5 | 62.5 (3) |
| C1—C2—C3—C4 | −6.6 (4) | C2—C1—C10—C9 | 176.9 (2) |
| O1—C3—C4—C18 | −57.0 (4) | C6—C5—C10—C1 | −179.6 (2) |
| C2—C3—C4—C18 | 124.1 (3) | C4—C5—C10—C1 | −62.4 (3) |
| O1—C3—C4—C5 | −173.1 (3) | C6—C5—C10—C20 | −58.8 (3) |
| C2—C3—C4—C5 | 8.0 (4) | C4—C5—C10—C20 | 58.5 (3) |
| O1—C3—C4—C19 | 60.7 (4) | C6—C5—C10—C9 | 62.1 (3) |
| C2—C3—C4—C19 | −118.2 (3) | C4—C5—C10—C9 | 179.3 (2) |
| C18—C4—C5—C6 | 28.8 (2) | C8—C9—C10—C1 | −179.5 (2) |
| C3—C4—C5—C6 | 150.2 (2) | C11—C9—C10—C1 | 54.6 (3) |
| C19—C4—C5—C6 | −86.7 (3) | C8—C9—C10—C20 | 58.3 (2) |
| C18—C4—C5—C10 | −94.2 (3) | C11—C9—C10—C20 | −67.5 (3) |
| C3—C4—C5—C10 | 27.2 (3) | C8—C9—C10—C5 | −64.7 (2) |
| C19—C4—C5—C10 | 150.3 (3) | C11—C9—C10—C5 | 169.5 (2) |
| C18—O3—C6—C7 | 145.2 (2) | C8—C9—C11—C12 | 47.6 (3) |
| C18—O3—C6—C5 | 20.1 (3) | C10—C9—C11—C12 | 173.2 (2) |
| C4—C5—C6—O3 | −30.2 (2) | C9—C11—C12—C13 | −67.5 (3) |
| C10—C5—C6—O3 | 93.4 (2) | C11—C12—C13—C15 | 142.6 (3) |
| C4—C5—C6—C7 | −150.5 (2) | C11—C12—C13—C17 | −94.1 (3) |
| C10—C5—C6—C7 | −26.9 (3) | C11—C12—C13—C14 | 24.2 (3) |
| C8—O4—C7—C6 | 112.7 (2) | C7—C8—C14—C13 | 153.1 (2) |
| O3—C6—C7—O4 | 166.57 (18) | O4—C8—C14—C13 | 86.4 (3) |
| C5—C6—C7—O4 | −75.4 (3) | C9—C8—C14—C13 | −52.9 (3) |
| O3—C6—C7—C8 | −124.6 (2) | C15—C13—C14—C8 | −84.6 (3) |
| C5—C6—C7—C8 | −6.5 (3) | C12—C13—C14—C8 | 33.6 (3) |
| C6—C7—C8—O4 | −101.9 (3) | C17—C13—C14—C8 | 152.5 (3) |
| O4—C7—C8—C14 | −102.5 (3) | C12—C13—C15—C16 | 115.8 (5) |
| C6—C7—C8—C14 | 155.6 (2) | C17—C13—C15—C16 | −5.0 (6) |
| O4—C7—C8—C9 | 104.2 (2) | C14—C13—C15—C16 | −125.0 (5) |
| C6—C7—C8—C9 | 2.3 (3) | C6—O3—C18—O2 | 176.6 (3) |
| C7—O4—C8—C14 | 111.2 (2) | C6—O3—C18—C4 | −1.0 (3) |
| C7—O4—C8—C9 | −109.3 (2) | C5—C4—C18—O2 | 164.5 (3) |
| C7—C8—C9—C11 | 163.7 (2) | C3—C4—C18—O2 | 41.0 (4) |
| O4—C8—C9—C11 | −129.6 (2) | C19—C4—C18—O2 | −76.3 (4) |
| C14—C8—C9—C11 | 9.4 (3) | C5—C4—C18—O3 | −18.1 (3) |
| C7—C8—C9—C10 | 34.3 (3) | C3—C4—C18—O3 | −141.6 (2) |
| O4—C8—C9—C10 | 101.1 (2) | C19—C4—C18—O3 | 101.0 (3) |
| C14—C8—C9—C10 | −119.9 (2) |
| H··· | ||||
| C2—H2B···O2i | 0.97 | 2.58 | 3.356 (5) | 137 |
| C7—H7···O4ii | 0.98 | 2.58 | 3.164 (4) | 118 |
| C11—H11A···O1iii | 0.97 | 2.55 | 3.420 (5) | 149 |
| C14—H14B···O1iv | 0.97 | 2.52 | 3.486 (5) | 178 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C2—H2 | 0.97 | 2.58 | 3.356 (5) | 137 |
| C7—H7⋯O4ii | 0.98 | 2.58 | 3.164 (4) | 118 |
| C11—H11 | 0.97 | 2.55 | 3.420 (5) | 149 |
| C14—H14 | 0.97 | 2.52 | 3.486 (5) | 178 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .