Literature DB >> 21202365

5,6-Dichloro-2-(3-methoxy-phen-yl)isoindoline-1,3-dione.

Orhan Büyükgüngör, Mustafa Odabaşoğlu.   

Abstract

The title compound, C(15)H(9)Cl(2)NO(3), crystallizes as an inversion twin, the ratio of the twin components being 0.43 (13):0.57 (13). The isoindoline group is planar and inclined by 77.63 (3)° to the aromatic ring substituent. The crystal structure is stabilized by aromatic π-π stacking inter-actions involving the benzene rings of adjacent isoindoline groups, with a centroid-centroid distance of 3.664 (7) Å and an inter-planar separation of 3.409 Å.

Entities:  

Year:  2008        PMID: 21202365      PMCID: PMC2961109          DOI: 10.1107/S1600536808010659

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Chapman et al. (1979 ▶); Hall et al., (1983 ▶; 1987 ▶); Srivastava et al. (2001 ▶); Abdel-Hafez (2004 ▶); Sena et al. (2007 ▶).

Experimental

Crystal data

C15H9Cl2NO3 M = 322.13 Orthorhombic, a = 6.8689 (5) Å b = 9.7362 (10) Å c = 20.4271 (14) Å V = 1366.1 (2) Å3 Z = 4 Mo Kα radiation μ = 0.48 mm−1 T = 296 K 0.65 × 0.51 × 0.23 mm

Data collection

Stoe IPDSII diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.685, T max = 0.888 6123 measured reflections 2687 independent reflections 2076 reflections with I > 2σ(I) R int = 0.117

Refinement

R[F 2 > 2σ(F 2)] = 0.071 wR(F 2) = 0.169 S = 1.00 2687 reflections 192 parameters H-atom parameters constrained Δρmax = 0.63 e Å−3 Δρmin = −0.57 e Å−3 Absolute structure: Flack (1983 ▶), 1114 Friedel pairs Flack parameter: 0.43 (13) Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808010659/rz2205sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808010659/rz2205Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H9Cl2NO3F000 = 656
Mr = 322.13Dx = 1.566 Mg m3
Orthorhombic, P212121Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 6123 reflections
a = 6.8689 (5) Åθ = 2.0–27.3º
b = 9.7362 (10) ŵ = 0.48 mm1
c = 20.4271 (14) ÅT = 296 K
V = 1366.1 (2) Å3Prism, colourless
Z = 40.65 × 0.51 × 0.23 mm
Stoe IPDSII diffractometer2687 independent reflections
Monochromator: plane graphite2076 reflections with I > 2σ(I)
Detector resolution: 6.67 pixels mm-1Rint = 0.117
T = 296 Kθmax = 26.0º
ω scan rotation methodθmin = 2.0º
Absorption correction: integration(X-RED32; Stoe & Cie, 2002)h = −8→8
Tmin = 0.685, Tmax = 0.888k = −12→10
6123 measured reflectionsl = −23→25
Refinement on F2H-atom parameters constrained
Least-squares matrix: full  w = 1/[σ2(Fo2) + (0.1011P)2] where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.071(Δ/σ)max = 0.001
wR(F2) = 0.169Δρmax = 0.63 e Å3
S = 1.01Δρmin = −0.57 e Å3
2687 reflectionsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
192 parametersExtinction coefficient: 0.054 (7)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), 1114 Friedel pairs
Secondary atom site location: difference Fourier mapFlack parameter: 0.43 (13)
Hydrogen site location: inferred from neighbouring sites
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2767 (6)0.3976 (4)0.4834 (2)0.0408 (9)
C20.2607 (6)0.5458 (4)0.5011 (2)0.0380 (8)
C30.2552 (7)0.6055 (4)0.5626 (2)0.0474 (9)
H30.25510.55260.60050.057*
C40.2499 (6)0.7459 (4)0.5652 (2)0.0458 (9)
C50.2520 (6)0.8278 (4)0.5080 (2)0.0444 (9)
C60.2545 (7)0.7642 (4)0.4471 (2)0.0463 (9)
H60.25380.81570.40880.056*
C70.2579 (6)0.6225 (4)0.44509 (19)0.0395 (8)
C80.2677 (6)0.5285 (4)0.3883 (2)0.0438 (9)
C90.3137 (6)0.2765 (5)0.3758 (2)0.0436 (10)
C100.4978 (6)0.2535 (6)0.3505 (3)0.0598 (13)
H100.59930.31350.35990.072*
C110.5282 (7)0.1425 (6)0.3118 (3)0.0624 (14)
H110.65170.12770.29460.075*
C120.3806 (7)0.0500 (5)0.2972 (2)0.0527 (12)
H120.4041−0.02630.27100.063*
C130.1967 (7)0.0752 (5)0.3229 (2)0.0477 (11)
C140.1630 (6)0.1861 (4)0.3621 (2)0.0466 (10)
H140.03970.20110.37950.056*
C150.0552 (10)−0.1131 (6)0.2632 (3)0.0743 (16)
H15A−0.0652−0.16290.26050.112*
H15B0.1584−0.17490.27490.112*
H15C0.0834−0.07200.22160.112*
N10.2788 (5)0.3963 (4)0.41436 (16)0.0412 (8)
O10.2907 (5)0.2994 (3)0.51795 (15)0.0550 (8)
O20.2669 (6)0.5562 (3)0.33082 (15)0.0616 (9)
O30.0389 (5)−0.0085 (4)0.3116 (2)0.0749 (11)
Cl10.2389 (2)0.82582 (13)0.64049 (6)0.0730 (4)
Cl20.25735 (16)1.00342 (11)0.51245 (6)0.0578 (4)
U11U22U33U12U13U23
C10.047 (2)0.0320 (19)0.044 (2)−0.0019 (18)0.0005 (19)0.0014 (16)
C20.0407 (16)0.0300 (17)0.043 (2)−0.0036 (16)−0.0006 (19)−0.0017 (14)
C30.058 (2)0.041 (2)0.043 (2)0.004 (2)−0.004 (2)−0.0045 (17)
C40.0455 (19)0.044 (2)0.047 (2)0.003 (2)−0.006 (2)−0.0117 (17)
C50.0383 (15)0.0338 (19)0.061 (2)0.0010 (17)−0.006 (2)−0.0052 (18)
C60.0487 (19)0.037 (2)0.053 (2)0.006 (2)0.001 (2)0.0073 (17)
C70.0399 (17)0.0360 (19)0.043 (2)−0.0027 (18)0.001 (2)0.0000 (15)
C80.049 (2)0.041 (2)0.042 (2)0.004 (2)0.0003 (18)0.0012 (16)
C90.054 (2)0.043 (2)0.034 (2)0.0034 (19)0.0016 (15)0.0006 (18)
C100.050 (2)0.072 (3)0.058 (3)−0.006 (2)0.007 (2)−0.016 (3)
C110.057 (3)0.069 (4)0.061 (3)0.007 (3)0.010 (2)−0.010 (3)
C120.075 (3)0.043 (3)0.040 (3)0.012 (2)0.002 (2)−0.011 (2)
C130.066 (3)0.035 (2)0.042 (2)−0.0022 (19)−0.0012 (18)−0.0046 (18)
C140.054 (2)0.040 (2)0.046 (2)0.0013 (19)0.0058 (18)−0.001 (2)
C150.108 (4)0.059 (3)0.055 (3)−0.021 (3)−0.001 (3)−0.013 (3)
N10.0523 (19)0.0362 (17)0.0351 (18)−0.0028 (15)0.0025 (15)−0.0036 (13)
O10.087 (2)0.0336 (15)0.0445 (17)0.0030 (16)−0.0010 (15)0.0009 (12)
O20.090 (2)0.0525 (18)0.0425 (18)0.004 (2)0.0015 (18)0.0047 (14)
O30.081 (2)0.067 (2)0.076 (3)−0.026 (2)0.0145 (19)−0.027 (2)
Cl10.1007 (9)0.0574 (7)0.0609 (8)0.0176 (8)−0.0121 (8)−0.0238 (6)
Cl20.0536 (5)0.0314 (5)0.0883 (8)0.0032 (5)−0.0054 (6)−0.0070 (5)
C1—O11.192 (5)C9—C101.384 (6)
C1—N11.410 (5)C9—C141.387 (6)
C1—C21.491 (5)C9—N11.428 (5)
C2—C71.367 (5)C10—C111.355 (7)
C2—C31.384 (6)C10—H100.9300
C3—C41.368 (6)C11—C121.388 (7)
C3—H30.9300C11—H110.9300
C4—C51.415 (6)C12—C131.390 (6)
C4—Cl11.725 (4)C12—H120.9300
C5—C61.389 (6)C13—C141.364 (6)
C5—Cl21.713 (4)C13—O31.376 (5)
C6—C71.381 (6)C14—H140.9300
C6—H60.9300C15—O31.424 (6)
C7—C81.479 (6)C15—H15A0.9600
C8—O21.205 (5)C15—H15B0.9600
C8—N11.395 (5)C15—H15C0.9600
O1—C1—N1125.7 (4)C14—C9—N1120.2 (3)
O1—C1—C2129.6 (4)C11—C10—C9119.2 (4)
N1—C1—C2104.6 (3)C11—C10—H10120.4
C7—C2—C3122.0 (4)C9—C10—H10120.4
C7—C2—C1109.0 (3)C10—C11—C12122.0 (4)
C3—C2—C1129.0 (4)C10—C11—H11119.0
C4—C3—C2117.1 (4)C12—C11—H11119.0
C4—C3—H3121.5C11—C12—C13117.9 (4)
C2—C3—H3121.5C11—C12—H12121.1
C3—C4—C5122.0 (4)C13—C12—H12121.1
C3—C4—Cl1119.1 (3)C14—C13—O3115.7 (4)
C5—C4—Cl1118.9 (3)C14—C13—C12121.1 (4)
C6—C5—C4119.2 (4)O3—C13—C12123.2 (4)
C6—C5—Cl2119.5 (3)C13—C14—C9119.6 (4)
C4—C5—Cl2121.2 (3)C13—C14—H14120.2
C7—C6—C5118.2 (4)C9—C14—H14120.2
C7—C6—H6120.9O3—C15—H15A109.5
C5—C6—H6120.9O3—C15—H15B109.5
C2—C7—C6121.4 (4)H15A—C15—H15B109.5
C2—C7—C8108.6 (3)O3—C15—H15C109.5
C6—C7—C8130.0 (4)H15A—C15—H15C109.5
O2—C8—N1125.4 (4)H15B—C15—H15C109.5
O2—C8—C7128.7 (4)C8—N1—C1111.9 (3)
N1—C8—C7105.9 (3)C8—N1—C9123.5 (3)
C10—C9—C14120.3 (4)C1—N1—C9124.1 (3)
C10—C9—N1119.5 (4)C13—O3—C15118.6 (4)
O1—C1—C2—C7176.9 (5)C14—C9—C10—C110.5 (8)
N1—C1—C2—C7−1.1 (5)N1—C9—C10—C11−177.4 (4)
O1—C1—C2—C3−1.1 (8)C9—C10—C11—C12−0.6 (9)
N1—C1—C2—C3−179.1 (4)C10—C11—C12—C130.8 (8)
C7—C2—C3—C4−1.0 (7)C11—C12—C13—C14−0.9 (7)
C1—C2—C3—C4176.7 (4)C11—C12—C13—O3179.7 (5)
C2—C3—C4—C5−0.6 (8)O3—C13—C14—C9−179.7 (4)
C2—C3—C4—Cl1178.9 (3)C12—C13—C14—C90.9 (7)
C3—C4—C5—C61.7 (7)C10—C9—C14—C13−0.7 (7)
Cl1—C4—C5—C6−177.9 (4)N1—C9—C14—C13177.2 (4)
C3—C4—C5—Cl2−176.8 (4)O2—C8—N1—C1180.0 (5)
Cl1—C4—C5—Cl23.6 (5)C7—C8—N1—C10.1 (5)
C4—C5—C6—C7−1.0 (7)O2—C8—N1—C97.6 (7)
Cl2—C5—C6—C7177.4 (3)C7—C8—N1—C9−172.3 (4)
C3—C2—C7—C61.7 (7)O1—C1—N1—C8−177.5 (4)
C1—C2—C7—C6−176.5 (4)C2—C1—N1—C80.6 (5)
C3—C2—C7—C8179.3 (4)O1—C1—N1—C9−5.2 (7)
C1—C2—C7—C81.2 (5)C2—C1—N1—C9172.9 (3)
C5—C6—C7—C2−0.6 (7)C10—C9—N1—C872.8 (6)
C5—C6—C7—C8−177.7 (4)C14—C9—N1—C8−105.2 (5)
C2—C7—C8—O2179.3 (5)C10—C9—N1—C1−98.6 (5)
C6—C7—C8—O2−3.3 (9)C14—C9—N1—C183.4 (5)
C2—C7—C8—N1−0.8 (5)C14—C13—O3—C15170.2 (5)
C6—C7—C8—N1176.6 (5)C12—C13—O3—C15−10.5 (8)
  6 in total

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Authors:  R M Srivastava; F J Oliveira; L P da Silva; J R de Freitas Filho; S P Oliveira; V L Lima
Journal:  Carbohydr Res       Date:  2001-06-04       Impact factor: 2.104

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Hypolipidemic activity of phthalimide derivatives. 1. N-Substituted phthalimide derivatives.

Authors:  J M Chapman; G H Cocolas; I H Hall
Journal:  J Med Chem       Date:  1979-11       Impact factor: 7.446

4.  Synthesis and anticonvulsant evaluation of N-substituted-isoindolinedione derivatives.

Authors:  Atef Abdel-Monem Abdel-Hafez
Journal:  Arch Pharm Res       Date:  2004-05       Impact factor: 4.946

5.  Antihyperlipidemic activity of phthalimide analogues in rodents.

Authors:  I H Hall; P J Voorstad; J M Chapman; G H Cocolas
Journal:  J Pharm Sci       Date:  1983-08       Impact factor: 3.534

6.  Hypolipidemic activity of o-(N-phthalimido)acetophenone in Sprague Dawley rats.

Authors:  I H Hall; D J Reynolds; O T Wong; C B Oswald; A R Murthy
Journal:  Pharm Res       Date:  1987-12       Impact factor: 4.200

  6 in total

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