Literature DB >> 21202287

2-(2,4-Dichloro-phen-yl)-3-[5-(4-methoxy-phen-yl)-1,3,4-thia-diazol-2-yl]-1,3-thia-zolidin-4-one.

Rong Wan1, Li-He Yin, Feng Han, Bin Wang, Jin-Tang Wang.   

Abstract

In the mol-ecule of the title compound, C(18)H(13)Cl(2)N(3)O(2)S(2), the thia-zolidinone ring has an envelope conformation with the S atom displaced by 0.394 (3) Å from the plane of the other ring atoms. The thia-diazole ring is oriented at a dihedral angle of 7.40 (4)° with respect to the 4-methoxy-phenyl ring. Intra-molecular C-H⋯S, C-H⋯N and C-H⋯Cl hydrogen bonds result in the formation of two planar and two non-planar five-membered rings. The planar five-membered rings are oriented at a dihedral angle of 6.23 (3)°. The 2,4-dichloro-phenyl ring is oriented at dihedral angles of 84.21 (4) and 83.55 (3)° with respect to the thia-diazole and 4-methoxy-phenyl rings, respectively. In the crystal structure, inter-molecular C-H⋯O hydrogen bonds link the mol-ecules into centrosymmetric dimers.

Entities:  

Year:  2008        PMID: 21202287      PMCID: PMC2961251          DOI: 10.1107/S1600536808008465

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Chen et al. (2000 ▶); Kidwai et al. (2000 ▶); Vicentini et al. (1998 ▶); Arun et al. (1999 ▶); Wasfy et al. (1996 ▶).

Experimental

Crystal data

C18H13Cl2N3O2S2 M = 438.33 Triclinic, a = 7.1310 (14) Å b = 8.1540 (16) Å c = 16.671 (3) Å α = 93.19 (3)° β = 96.43 (3)° γ = 105.89 (3)° V = 922.7 (3) Å3 Z = 2 Mo Kα radiation μ = 0.60 mm−1 T = 298 (2) K 0.30 × 0.10 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.841, T max = 0.943 3606 measured reflections 3315 independent reflections 2228 reflections with I > 2σ(I) R int = 0.084 3 standard reflections every 200 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.067 wR(F 2) = 0.211 S = 1.02 3315 reflections 244 parameters H-atom parameters constrained Δρmax = 0.47 e Å−3 Δρmin = −0.61 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808008465/hk2442sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808008465/hk2442Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H13Cl2N3O2S2Z = 2
Mr = 438.33F000 = 448
Triclinic, P1Dx = 1.578 Mg m3
Hall symbol: -P 1Melting point = 507–509 K
a = 7.1310 (14) ÅMo Kα radiation λ = 0.71073 Å
b = 8.1540 (16) ÅCell parameters from 25 reflections
c = 16.671 (3) Åθ = 9–12º
α = 93.19 (3)ºµ = 0.60 mm1
β = 96.43 (3)ºT = 298 (2) K
γ = 105.89 (3)ºBlock, colorless
V = 922.7 (3) Å30.30 × 0.10 × 0.10 mm
Enraf–Nonius CAD-4 diffractometerRint = 0.084
Radiation source: fine-focus sealed tubeθmax = 25.2º
Monochromator: graphiteθmin = 1.2º
T = 298(2) Kh = 0→8
ω/2θ scansk = −9→9
Absorption correction: ψ scan(North et al., 1968)l = −19→19
Tmin = 0.841, Tmax = 0.9433 standard reflections
3606 measured reflections every 200 reflections
3315 independent reflections intensity decay: none
2228 reflections with I > 2σ(I)
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.067H-atom parameters constrained
wR(F2) = 0.211  w = 1/[σ2(Fo2) + (0.1P)2 + 2P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
3315 reflectionsΔρmax = 0.47 e Å3
244 parametersΔρmin = −0.61 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl11.3375 (3)0.6645 (2)0.50289 (13)0.0801 (6)
Cl21.1228 (2)1.20318 (19)0.40205 (10)0.0606 (5)
S10.78625 (18)0.7174 (2)0.06058 (9)0.0492 (4)
S20.5812 (2)0.9562 (2)0.33166 (11)0.0659 (5)
O11.3277 (6)0.6538 (6)−0.2389 (2)0.0616 (11)
O20.4564 (5)0.6490 (6)0.1380 (3)0.0653 (12)
N11.1375 (6)0.9039 (7)0.1050 (3)0.0535 (13)
N21.0345 (6)0.9262 (7)0.1690 (3)0.0557 (13)
N30.7229 (6)0.8433 (6)0.2094 (3)0.0488 (12)
C11.5346 (9)0.7003 (9)−0.2423 (4)0.0677 (18)
H1B1.55860.6672−0.29550.102*
H1C1.59620.6431−0.20300.102*
H1D1.58800.8220−0.23060.102*
C21.2658 (8)0.6915 (7)−0.1674 (3)0.0481 (13)
C31.0653 (8)0.6308 (9)−0.1639 (4)0.0606 (17)
H3A0.98260.5675−0.20880.073*
C40.9884 (8)0.6632 (8)−0.0956 (4)0.0556 (16)
H4A0.85380.6203−0.09440.067*
C51.1052 (7)0.7578 (7)−0.0282 (3)0.0444 (13)
C61.3061 (8)0.8127 (8)−0.0323 (4)0.0561 (16)
H6A1.39000.87210.01310.067*
C71.3842 (8)0.7822 (8)−0.1009 (4)0.0556 (16)
H7A1.51890.8237−0.10210.067*
C81.0288 (7)0.8015 (7)0.0450 (3)0.0451 (13)
C90.8518 (7)0.8390 (7)0.1524 (3)0.0457 (13)
C100.5300 (7)0.7452 (8)0.1973 (4)0.0491 (14)
C110.4280 (9)0.7736 (9)0.2684 (4)0.0670 (18)
H11A0.40380.67340.29870.080*
H11B0.30250.79280.24990.080*
C120.7992 (7)0.9486 (7)0.2846 (3)0.0463 (13)
H12A0.86931.06430.27310.056*
C130.9363 (7)0.8774 (7)0.3396 (3)0.0414 (12)
C140.9118 (8)0.7054 (7)0.3390 (4)0.0501 (14)
H14A0.80990.63220.30330.060*
C151.0296 (8)0.6354 (7)0.3883 (4)0.0518 (14)
H15A1.00950.51750.38650.062*
C161.1798 (8)0.7468 (8)0.4411 (3)0.0473 (13)
C171.2064 (7)0.9194 (7)0.4448 (3)0.0464 (13)
H17A1.30640.99270.48130.056*
C181.0853 (7)0.9832 (7)0.3946 (3)0.0425 (12)
U11U22U33U12U13U23
Cl10.0617 (10)0.0839 (13)0.0961 (14)0.0270 (9)−0.0084 (9)0.0253 (10)
Cl20.0494 (8)0.0463 (8)0.0828 (11)0.0091 (6)0.0096 (7)−0.0025 (7)
S10.0242 (6)0.0653 (10)0.0511 (9)0.0018 (6)0.0043 (6)0.0040 (7)
S20.0417 (8)0.0898 (13)0.0728 (11)0.0289 (8)0.0138 (8)−0.0028 (9)
O10.044 (2)0.072 (3)0.058 (3)−0.001 (2)0.0138 (19)−0.011 (2)
O20.028 (2)0.088 (3)0.068 (3)−0.001 (2)0.0030 (19)−0.002 (3)
N10.028 (2)0.076 (3)0.051 (3)0.004 (2)0.011 (2)−0.005 (2)
N20.030 (2)0.075 (3)0.054 (3)0.002 (2)0.008 (2)−0.003 (3)
N30.026 (2)0.072 (3)0.049 (3)0.012 (2)0.012 (2)0.007 (2)
C10.045 (3)0.090 (5)0.071 (4)0.018 (3)0.026 (3)0.002 (4)
C20.038 (3)0.049 (3)0.053 (3)0.004 (2)0.009 (3)0.006 (3)
C30.033 (3)0.084 (5)0.053 (4)0.004 (3)0.000 (3)−0.010 (3)
C40.025 (3)0.076 (4)0.057 (4)0.003 (3)−0.001 (2)−0.002 (3)
C50.029 (3)0.048 (3)0.052 (3)0.003 (2)0.004 (2)0.005 (3)
C60.027 (3)0.076 (4)0.050 (3)−0.005 (3)0.001 (2)−0.009 (3)
C70.029 (3)0.075 (4)0.055 (4)0.001 (3)0.009 (3)0.001 (3)
C80.025 (2)0.052 (3)0.056 (3)0.004 (2)0.007 (2)0.011 (3)
C90.030 (3)0.056 (3)0.052 (3)0.012 (2)0.007 (2)0.011 (3)
C100.025 (3)0.061 (4)0.062 (4)0.010 (2)0.008 (3)0.012 (3)
C110.039 (3)0.092 (5)0.072 (4)0.018 (3)0.020 (3)0.008 (4)
C120.034 (3)0.054 (3)0.054 (3)0.015 (2)0.010 (2)0.006 (3)
C130.028 (2)0.048 (3)0.049 (3)0.011 (2)0.011 (2)0.000 (2)
C140.037 (3)0.052 (3)0.058 (4)0.009 (3)0.005 (3)−0.003 (3)
C150.041 (3)0.043 (3)0.071 (4)0.011 (3)0.014 (3)0.004 (3)
C160.035 (3)0.058 (4)0.053 (3)0.016 (3)0.010 (2)0.011 (3)
C170.028 (3)0.057 (4)0.050 (3)0.006 (2)0.006 (2)0.000 (3)
C180.034 (3)0.042 (3)0.054 (3)0.010 (2)0.019 (2)0.003 (2)
S1—C91.721 (6)C4—C51.375 (8)
S1—C81.732 (5)C4—H4A0.9300
Cl1—C161.734 (6)C5—C61.390 (7)
O1—C21.366 (7)C5—C81.456 (8)
O1—C11.427 (7)C6—C71.366 (8)
N1—C81.295 (7)C6—H6A0.9300
N1—N21.393 (6)C7—H7A0.9300
C1—H1B0.9600C10—C111.498 (8)
C1—H1C0.9600C11—H11A0.9700
C1—H1D0.9600C11—H11B0.9700
Cl2—C181.735 (5)C12—C131.517 (7)
S2—C111.788 (7)C12—H12A0.9800
S2—C121.832 (5)C13—C141.364 (8)
O2—C101.200 (7)C13—C181.381 (7)
C2—C71.358 (8)C14—C151.367 (8)
C2—C31.388 (7)C14—H14A0.9300
N2—C91.292 (7)C15—C161.383 (8)
N3—C101.375 (7)C15—H15A0.9300
N3—C91.399 (7)C16—C171.365 (8)
N3—C121.441 (7)C17—C181.360 (8)
C3—C41.362 (8)C17—H17A0.9300
C3—H3A0.9300
C9—S1—C886.0 (3)N2—C9—S1116.2 (4)
C2—O1—C1117.6 (5)N3—C9—S1124.3 (4)
C8—N1—N2113.1 (4)O2—C10—N3124.0 (5)
O1—C1—H1B109.5O2—C10—C11125.4 (5)
O1—C1—H1C109.5N3—C10—C11110.6 (5)
H1B—C1—H1C109.5C10—C11—S2108.7 (4)
O1—C1—H1D109.5C10—C11—H11A110.0
H1B—C1—H1D109.5S2—C11—H11A110.0
H1C—C1—H1D109.5C10—C11—H11B110.0
C11—S2—C1292.5 (3)S2—C11—H11B110.0
C7—C2—O1125.2 (5)H11A—C11—H11B108.3
C7—C2—C3118.7 (5)N3—C12—C13112.7 (4)
O1—C2—C3116.1 (5)N3—C12—S2104.8 (3)
C9—N2—N1110.6 (5)C13—C12—S2111.2 (4)
C10—N3—C9122.2 (5)N3—C12—H12A109.3
C10—N3—C12119.5 (4)C13—C12—H12A109.3
C9—N3—C12118.3 (4)S2—C12—H12A109.3
C4—C3—C2120.7 (5)C14—C13—C18117.3 (5)
C4—C3—H3A119.7C14—C13—C12121.2 (5)
C2—C3—H3A119.7C18—C13—C12121.5 (5)
C3—C4—C5121.5 (5)C13—C14—C15123.3 (5)
C3—C4—H4A119.2C13—C14—H14A118.4
C5—C4—H4A119.2C15—C14—H14A118.4
C4—C5—C6116.7 (5)C14—C15—C16117.3 (5)
C4—C5—C8123.5 (5)C14—C15—H15A121.4
C6—C5—C8119.8 (5)C16—C15—H15A121.4
C7—C6—C5122.1 (5)C17—C16—C15121.2 (5)
C7—C6—H6A119.0C17—C16—Cl1119.7 (4)
C5—C6—H6A119.0C15—C16—Cl1119.0 (5)
C2—C7—C6120.2 (5)C18—C17—C16119.4 (5)
C2—C7—H7A119.9C18—C17—H17A120.3
C6—C7—H7A119.9C16—C17—H17A120.3
N1—C8—C5122.9 (4)C17—C18—C13121.5 (5)
N1—C8—S1114.1 (4)C17—C18—Cl2117.8 (4)
C5—C8—S1123.0 (4)C13—C18—Cl2120.6 (4)
N2—C9—N3119.5 (5)
C1—O1—C2—C75.7 (9)C12—N3—C10—O2−177.0 (6)
C1—O1—C2—C3−174.3 (6)C9—N3—C10—C11179.2 (5)
C8—N1—N2—C9−0.6 (7)C12—N3—C10—C112.1 (7)
C7—C2—C3—C40.7 (10)O2—C10—C11—S2−169.0 (5)
O1—C2—C3—C4−179.3 (6)N3—C10—C11—S212.0 (7)
C2—C3—C4—C50.6 (10)C12—S2—C11—C10−17.2 (5)
C3—C4—C5—C6−2.5 (9)C10—N3—C12—C13106.6 (5)
C3—C4—C5—C8177.4 (6)C9—N3—C12—C13−70.6 (6)
C4—C5—C6—C73.2 (10)C10—N3—C12—S2−14.5 (6)
C8—C5—C6—C7−176.8 (6)C9—N3—C12—S2168.3 (4)
O1—C2—C7—C6179.9 (6)C11—S2—C12—N317.6 (4)
C3—C2—C7—C6−0.1 (10)C11—S2—C12—C13−104.5 (4)
C5—C6—C7—C2−1.9 (10)N3—C12—C13—C14−31.0 (7)
N2—N1—C8—C5−179.4 (5)S2—C12—C13—C1486.3 (6)
N2—N1—C8—S1−0.9 (7)N3—C12—C13—C18151.9 (5)
C4—C5—C8—N1−173.3 (6)S2—C12—C13—C18−90.8 (5)
C6—C5—C8—N16.6 (9)C18—C13—C14—C15−1.7 (8)
C4—C5—C8—S18.3 (8)C12—C13—C14—C15−178.9 (5)
C6—C5—C8—S1−171.8 (5)C13—C14—C15—C160.1 (9)
C9—S1—C8—N11.5 (5)C14—C15—C16—C171.4 (8)
C9—S1—C8—C5−179.9 (5)C14—C15—C16—Cl1−178.2 (4)
N1—N2—C9—N3179.6 (5)C15—C16—C17—C18−1.3 (8)
N1—N2—C9—S11.8 (7)Cl1—C16—C17—C18178.3 (4)
C10—N3—C9—N2−175.9 (5)C16—C17—C18—C13−0.3 (8)
C12—N3—C9—N21.1 (8)C16—C17—C18—Cl2179.4 (4)
C10—N3—C9—S11.7 (8)C14—C13—C18—C171.7 (8)
C12—N3—C9—S1178.7 (4)C12—C13—C18—C17179.0 (5)
C8—S1—C9—N2−1.9 (5)C14—C13—C18—Cl2−178.0 (4)
C8—S1—C9—N3−179.6 (5)C12—C13—C18—Cl2−0.7 (7)
C9—N3—C10—O20.1 (9)
D—H···AD—HH···AD···AD—H···A
C4—H4A···S10.932.793.180 (7)106
C6—H6A···N10.932.552.856 (8)100
C12—H12A···Cl20.982.633.063 (5)107
C14—H14A···N30.932.542.863 (8)101
C14—H14A···O1i0.932.413.219 (7)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C4—H4A⋯S10.932.793.180 (7)106
C6—H6A⋯N10.932.552.856 (8)100
C12—H12A⋯Cl20.982.633.063 (5)107
C14—H14A⋯N30.932.542.863 (8)101
C14—H14A⋯O1i0.932.413.219 (7)146

Symmetry code: (i) .

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