Literature DB >> 21202268

Dicyclo-hexyl-ammonium 2-methoxy-benzoate.

Nenad Judaš, Tomislav Portada.   

Abstract

The asymmetric unit of the title compound, C(12)H(24)N(+)·C(8)H(7)O(3) (-), contains one dicyclo-hexyl-ammonium cation and one 2-methoxy-benzoate anion. Two cations and two anions are linked together to form a four-ion cluster through a set of N-H⋯O hydrogen bonds. Weak C-H⋯O hydrogen bonds connect the clusters into chains that are stacked along the crystallographic c axis.

Entities:  

Year:  2008        PMID: 21202268      PMCID: PMC2961178          DOI: 10.1107/S1600536808007587

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of dicyclo­hexyl­ammonium salts of monocarboxylic acids, see: Ng et al. (1999 ▶); Ng, Naumov et al. 2001 ▶), Ng & Hook (1999 ▶); Subramanian et al. (2000 ▶). For the crystal structures of dicyclo­hexyl­ammonium salts of dicarboxylic acids, see: Ballabh et al. (2005 ▶); Trivedi et al. (2005 ▶); Ng, Chantrapromma et al. (2001 ▶). For related literature, see: Zain & Ng (2007 ▶); Trivedi et al. (2004 ▶); Ng et al. (1991 ▶); Allen et al. (1987 ▶).

Experimental

Crystal data

C12H24NC8H7O3 M = 333.46 Monoclinic, a = 9.2798 (5) Å b = 17.7978 (9) Å c = 12.1513 (7) Å β = 104.720 (5)° V = 1941.04 (18) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 (1) K 0.62 × 0.41 × 0.35 mm

Data collection

Oxford Diffraction Xcalibur CCD diffractometer Absorption correction: none 19673 measured reflections 3789 independent reflections 2750 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.068 wR(F 2) = 0.175 S = 1.03 3789 reflections 225 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.37 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2003 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2003 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶), Mercury (Macrae et al., 2006 ▶), RasTop (Valadon, 2000–2003 ▶) and POV-RAY (Persistence of Vision, 2004 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808007587/wn2244sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808007587/wn2244Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H24N+·C8H7O3Dx = 1.141 Mg m3
Mr = 333.46Melting point: 416 K
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 742 reflections
a = 9.2798 (5) Åθ = 6.4–21.2º
b = 17.7978 (9) ŵ = 0.08 mm1
c = 12.1513 (7) ÅT = 293 (1) K
β = 104.720 (5)ºCell measurement pressure: 101(1) kPa
V = 1941.04 (18) Å3Prismatic, colourless
Z = 40.62 × 0.41 × 0.35 mm
F000 = 728
Oxford Diffraction Xcalibur CCD diffractometer3789 independent reflections
Radiation source: fine-focus sealed tube2750 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.042
T = 293(1) Kθmax = 26.0º
P = 101(1) kPaθmin = 4.1º
ω scansh = −11→11
Absorption correction: nonek = −21→21
19673 measured reflectionsl = −14→14
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.068  w = 1/[σ2(Fo2) + (0.0745P)2 + 0.785P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.175(Δ/σ)max < 0.001
S = 1.03Δρmax = 0.37 e Å3
3789 reflectionsΔρmin = −0.16 e Å3
225 parametersExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.034 (4)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.2706 (2)0.08567 (10)1.00183 (17)0.0842 (6)
O20.04537 (19)0.13445 (12)0.96352 (17)0.0852 (6)
O30.0699 (2)0.14787 (12)0.72365 (14)0.0819 (6)
N10.2059 (2)−0.06289 (11)1.02163 (16)0.0491 (5)
H10.114 (3)−0.0780 (13)1.0175 (19)0.059*
H20.209 (2)−0.0112 (15)1.0178 (19)0.059*
C10.1749 (2)0.13270 (11)0.95593 (17)0.0471 (5)
C20.2251 (2)0.19520 (11)0.89133 (17)0.0438 (5)
C30.3308 (3)0.24641 (13)0.9464 (2)0.0634 (6)
H30.37310.24131.02410.076*
C40.3748 (4)0.30529 (15)0.8877 (3)0.0898 (10)
H40.44650.33920.92580.108*
C50.3122 (4)0.31337 (16)0.7736 (3)0.0894 (10)
H50.34000.35350.73450.107*
C60.2088 (3)0.26265 (16)0.7164 (2)0.0750 (8)
H60.16710.26820.63880.090*
C70.1666 (2)0.20300 (13)0.77480 (19)0.0537 (6)
C80.0317 (4)0.1435 (2)0.6036 (2)0.0992 (11)
H8B−0.02210.18780.57220.149*
H8C−0.02950.10000.57950.149*
H8A0.12080.13950.57760.149*
C90.2458 (2)−0.09394 (12)0.91808 (18)0.0507 (5)
H90.3437−0.07420.91620.061*
C100.1326 (3)−0.06616 (16)0.8135 (2)0.0761 (7)
H10A0.1324−0.01170.81290.091*
H10B0.0340−0.08300.81590.091*
C110.1681 (4)−0.09527 (19)0.7053 (2)0.0940 (10)
H11B0.0913−0.07870.63970.113*
H11A0.2622−0.07420.69920.113*
C120.1775 (4)−0.17925 (19)0.7044 (3)0.0950 (10)
H12B0.2082−0.19560.63770.114*
H12A0.0800−0.20050.70050.114*
C130.2877 (5)−0.2071 (2)0.8103 (3)0.1075 (11)
H13A0.3869−0.19110.80860.129*
H13B0.2865−0.26160.81060.129*
C140.2540 (3)−0.17841 (14)0.9200 (2)0.0760 (8)
H14B0.1600−0.19910.92710.091*
H14A0.3316−0.19480.98520.091*
C150.3019 (2)−0.08294 (11)1.13645 (17)0.0471 (5)
H150.2968−0.13741.14670.057*
C160.2390 (2)−0.04421 (14)1.2256 (2)0.0599 (6)
H16A0.23340.00941.21100.072*
H16B0.1386−0.06231.21940.072*
C170.3332 (3)−0.05828 (17)1.3448 (2)0.0743 (7)
H17B0.3262−0.11091.36370.089*
H17A0.2947−0.02871.39810.089*
C180.4956 (3)−0.03803 (17)1.3571 (2)0.0755 (7)
H18A0.50470.01591.34900.091*
H18B0.5541−0.05221.43230.091*
C190.5553 (3)−0.07794 (15)1.2679 (2)0.0717 (7)
H19B0.6573−0.06231.27480.086*
H19A0.5555−0.13171.28120.086*
C200.4629 (2)−0.06121 (14)1.1488 (2)0.0594 (6)
H20A0.5021−0.08901.09410.071*
H20B0.4689−0.00801.13290.071*
U11U22U33U12U13U23
O10.1052 (14)0.0553 (11)0.1037 (15)0.0129 (10)0.0479 (12)0.0276 (10)
O20.0615 (10)0.1125 (16)0.0879 (14)−0.0220 (10)0.0307 (9)0.0165 (11)
O30.0777 (11)0.1234 (17)0.0406 (9)−0.0256 (11)0.0079 (8)−0.0009 (9)
N10.0455 (9)0.0437 (10)0.0621 (12)0.0020 (8)0.0210 (8)0.0081 (8)
C10.0600 (12)0.0460 (12)0.0374 (11)−0.0104 (10)0.0166 (9)−0.0060 (9)
C20.0455 (10)0.0423 (11)0.0465 (12)0.0037 (8)0.0168 (9)0.0004 (8)
C30.0789 (16)0.0585 (14)0.0571 (14)−0.0167 (12)0.0252 (12)−0.0057 (11)
C40.121 (2)0.0557 (16)0.108 (3)−0.0344 (16)0.056 (2)−0.0122 (15)
C50.127 (3)0.0545 (16)0.108 (3)0.0052 (17)0.068 (2)0.0244 (16)
C60.0877 (18)0.0762 (18)0.0692 (17)0.0236 (15)0.0344 (14)0.0327 (14)
C70.0502 (11)0.0625 (14)0.0503 (13)0.0092 (10)0.0164 (10)0.0082 (10)
C80.091 (2)0.152 (3)0.0475 (16)0.004 (2)0.0051 (14)−0.0046 (18)
C90.0505 (11)0.0522 (12)0.0529 (13)−0.0041 (9)0.0196 (10)0.0033 (9)
C100.0922 (19)0.0692 (17)0.0626 (17)0.0069 (14)0.0116 (14)0.0055 (13)
C110.125 (3)0.091 (2)0.0612 (18)−0.0079 (19)0.0165 (17)0.0017 (15)
C120.121 (3)0.093 (2)0.071 (2)−0.0183 (19)0.0259 (18)−0.0164 (17)
C130.164 (3)0.078 (2)0.088 (2)0.027 (2)0.046 (2)−0.0125 (17)
C140.107 (2)0.0544 (15)0.0715 (18)0.0130 (14)0.0313 (15)0.0015 (12)
C150.0506 (11)0.0382 (10)0.0542 (13)0.0017 (8)0.0165 (10)0.0060 (9)
C160.0547 (12)0.0597 (14)0.0712 (16)−0.0047 (10)0.0268 (11)−0.0068 (11)
C170.0851 (18)0.0795 (18)0.0591 (16)−0.0140 (14)0.0200 (13)−0.0135 (13)
C180.0735 (16)0.0733 (17)0.0737 (18)−0.0050 (13)0.0074 (13)−0.0142 (14)
C190.0571 (13)0.0656 (16)0.0864 (19)0.0069 (12)0.0071 (13)−0.0050 (14)
C200.0476 (11)0.0629 (14)0.0698 (16)0.0050 (10)0.0189 (11)0.0007 (11)
O1—C11.244 (3)C11—C121.498 (5)
O2—C11.229 (3)C11—H11B0.9700
O3—C71.368 (3)C11—H11A0.9700
O3—C81.413 (3)C12—C131.510 (5)
N1—C151.495 (3)C12—H12B0.9700
N1—C91.504 (3)C12—H12A0.9700
N1—H10.88 (2)C13—C141.532 (4)
N1—H20.92 (3)C13—H13A0.9700
C1—C21.502 (3)C13—H13B0.9700
C2—C31.381 (3)C14—H14B0.9700
C2—C71.389 (3)C14—H14A0.9700
C3—C41.386 (4)C15—C201.513 (3)
C3—H30.9300C15—C161.520 (3)
C4—C51.368 (4)C15—H150.9800
C4—H40.9300C16—C171.511 (3)
C5—C61.371 (4)C16—H16A0.9700
C5—H50.9300C16—H16B0.9700
C6—C71.387 (3)C17—C181.520 (4)
C6—H60.9300C17—H17B0.9700
C8—H8B0.9600C17—H17A0.9700
C8—H8C0.9600C18—C191.513 (4)
C8—H8A0.9600C18—H18A0.9700
C9—C141.505 (3)C18—H18B0.9700
C9—C101.511 (3)C19—C201.513 (3)
C9—H90.9800C19—H19B0.9700
C10—C111.526 (4)C19—H19A0.9700
C10—H10A0.9700C20—H20A0.9700
C10—H10B0.9700C20—H20B0.9700
C7—O3—C8118.2 (2)C11—C12—H12B109.5
C15—N1—C9118.55 (16)C13—C12—H12B109.5
C15—N1—H1108.5 (15)C11—C12—H12A109.5
C9—N1—H1106.2 (15)C13—C12—H12A109.5
C15—N1—H2105.4 (14)H12B—C12—H12A108.1
C9—N1—H2107.8 (14)C12—C13—C14112.8 (3)
H1—N1—H2110 (2)C12—C13—H13A109.0
O2—C1—O1125.7 (2)C14—C13—H13A109.0
O2—C1—C2117.3 (2)C12—C13—H13B109.0
O1—C1—C2116.86 (18)C14—C13—H13B109.0
C3—C2—C7118.3 (2)H13A—C13—H13B107.8
C3—C2—C1120.77 (19)C9—C14—C13109.9 (2)
C7—C2—C1120.94 (18)C9—C14—H14B109.7
C2—C3—C4121.0 (3)C13—C14—H14B109.7
C2—C3—H3119.5C9—C14—H14A109.7
C4—C3—H3119.5C13—C14—H14A109.7
C5—C4—C3119.8 (3)H14B—C14—H14A108.2
C5—C4—H4120.1N1—C15—C20111.74 (17)
C3—C4—H4120.1N1—C15—C16108.11 (17)
C4—C5—C6120.4 (2)C20—C15—C16111.23 (18)
C4—C5—H5119.8N1—C15—H15108.6
C6—C5—H5119.8C20—C15—H15108.6
C5—C6—C7119.8 (3)C16—C15—H15108.6
C5—C6—H6120.1C17—C16—C15112.00 (19)
C7—C6—H6120.1C17—C16—H16A109.2
O3—C7—C6123.7 (2)C15—C16—H16A109.2
O3—C7—C2115.66 (19)C17—C16—H16B109.2
C6—C7—C2120.6 (2)C15—C16—H16B109.2
O3—C8—H8B109.5H16A—C16—H16B107.9
O3—C8—H8C109.5C16—C17—C18111.9 (2)
H8B—C8—H8C109.5C16—C17—H17B109.2
O3—C8—H8A109.5C18—C17—H17B109.2
H8B—C8—H8A109.5C16—C17—H17A109.2
H8C—C8—H8A109.5C18—C17—H17A109.2
N1—C9—C14112.10 (18)H17B—C17—H17A107.9
N1—C9—C10108.46 (18)C19—C18—C17110.6 (2)
C14—C9—C10111.2 (2)C19—C18—H18A109.5
N1—C9—H9108.3C17—C18—H18A109.5
C14—C9—H9108.3C19—C18—H18B109.5
C10—C9—H9108.3C17—C18—H18B109.5
C9—C10—C11110.9 (2)H18A—C18—H18B108.1
C9—C10—H10A109.5C20—C19—C18111.8 (2)
C11—C10—H10A109.5C20—C19—H19B109.3
C9—C10—H10B109.5C18—C19—H19B109.3
C11—C10—H10B109.5C20—C19—H19A109.3
H10A—C10—H10B108.0C18—C19—H19A109.3
C12—C11—C10111.7 (3)H19B—C19—H19A107.9
C12—C11—H11B109.3C19—C20—C15110.46 (19)
C10—C11—H11B109.3C19—C20—H20A109.6
C12—C11—H11A109.3C15—C20—H20A109.6
C10—C11—H11A109.3C19—C20—H20B109.6
H11B—C11—H11A107.9C15—C20—H20B109.6
C11—C12—C13110.5 (3)H20A—C20—H20B108.1
D—H···AD—HH···AD···AD—H···A
N1—H2···O10.92 (3)1.84 (3)2.735 (3)163 (2)
N1—H1···O2i0.88 (2)1.85 (3)2.703 (2)162 (2)
C20—H20A···O1ii0.972.663.457 (3)140
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H2⋯O10.92 (3)1.84 (3)2.735 (3)163 (2)
N1—H1⋯O2i0.88 (2)1.85 (3)2.703 (2)162 (2)
C20—H20A⋯O1ii0.972.663.457 (3)140

Symmetry codes: (i) ; (ii) .

  3 in total

1.  Bis(dicyclohexylammonium 3-thienylacetate).

Authors:  S W Ng; S Chantrapromma; I A Razak; H K Fun
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2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Structure-property correlation of a new family of organogelators based on organic salts and their selective gelation of oil from oil/water mixtures.

Authors:  Darshak R Trivedi; Amar Ballabh; Parthasarathi Dastidar; Bishwajit Ganguly
Journal:  Chemistry       Date:  2004-10-25       Impact factor: 5.236

  3 in total
  1 in total

1.  Dicyclo-hexyl-ammonium (S)-2-azido-3-phenyl-propano-ate.

Authors:  Sebastian J Petrik; Christopher L Brown; Sue E Boyd; Peter C Healy
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  1 in total

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