| Literature DB >> 21202217 |
Bing-Yu Zhang1, Jing-Jing Nie, Duan-Jun Xu.
Abstract
In the mol-ecule of the title compound, [Ni(C(5)H(4)NO(3)S)(2)(H(2)O)(4)], the Ni(II) cation is located on an inversion center and is coordinated by four water mol-ecules and two pyridine-3-sulfonate anions with an NiN(2)O(4) distorted octa-hedral geometry. The face-to-face separation of 3.561 (5) Å between parallel pyridine rings indicates the existence of weak π-π stacking between the pyridine rings. The structure also contains inter-molecular O-H⋯O hydrogen bonding and weak C-H⋯O hydrogen bonding.Entities:
Year: 2008 PMID: 21202217 PMCID: PMC2961246 DOI: 10.1107/S1600536808010076
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C5H4NO3S)2(H2O)4] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 5256 reflections |
| θ = 2.8–24.0º | |
| µ = 1.47 mm−1 | |
| β = 97.419 (12)º | Prism, blue |
| 0.32 × 0.22 × 0.20 mm | |
| Rigaku R-AXIS RAPID IP diffractometer | 1524 independent reflections |
| Radiation source: fine-focus sealed tube | 1449 reflections with |
| Monochromator: graphite | |
| Detector resolution: 10.0 pixels mm-1 | θmax = 25.4º |
| θmin = 2.8º | |
| ω scans | |
| Absorption correction: multi-scan(ABSCOR; Higashi, 1995) | |
| 8877 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 1524 reflections | Δρmax = 0.29 e Å−3 |
| 115 parameters | Δρmin = −0.37 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ni | 0.5000 | 0.5000 | 0.5000 | 0.02883 (13) | |
| S | 0.45204 (7) | 0.75905 (4) | −0.03581 (6) | 0.03407 (15) | |
| N1 | 0.5850 (2) | 0.54221 (13) | 0.28948 (18) | 0.0307 (3) | |
| O1 | 0.76142 (19) | 0.48676 (11) | 0.60868 (18) | 0.0388 (3) | |
| H1B | 0.8326 | 0.5397 | 0.5900 | 0.058* | |
| H1A | 0.8182 | 0.4333 | 0.5998 | 0.058* | |
| O2 | 0.50231 (19) | 0.34035 (11) | 0.45010 (17) | 0.0411 (3) | |
| H2A | 0.5076 | 0.3156 | 0.3615 | 0.062* | |
| H2B | 0.4194 | 0.3021 | 0.4815 | 0.062* | |
| O3 | 0.5370 (3) | 0.76975 (16) | −0.1732 (2) | 0.0687 (6) | |
| O4 | 0.4828 (2) | 0.85025 (12) | 0.0624 (2) | 0.0554 (5) | |
| O5 | 0.2658 (2) | 0.73019 (12) | −0.06337 (19) | 0.0481 (4) | |
| C1 | 0.7217 (3) | 0.49242 (15) | 0.2368 (3) | 0.0370 (5) | |
| H1 | 0.7768 | 0.4372 | 0.2943 | 0.044* | |
| C2 | 0.7839 (3) | 0.51907 (18) | 0.1020 (3) | 0.0452 (5) | |
| H2 | 0.8783 | 0.4819 | 0.0693 | 0.054* | |
| C3 | 0.7053 (3) | 0.60162 (17) | 0.0150 (3) | 0.0405 (5) | |
| H3 | 0.7461 | 0.6218 | −0.0762 | 0.049* | |
| C4 | 0.5641 (2) | 0.65298 (14) | 0.0684 (2) | 0.0298 (4) | |
| C5 | 0.5074 (3) | 0.62143 (15) | 0.2044 (2) | 0.0320 (4) | |
| H5 | 0.4116 | 0.6565 | 0.2384 | 0.038* |
| Ni | 0.0309 (2) | 0.0273 (2) | 0.0284 (2) | 0.00105 (13) | 0.00426 (14) | 0.00418 (13) |
| S | 0.0419 (3) | 0.0278 (3) | 0.0317 (3) | 0.0027 (2) | 0.0018 (2) | 0.00399 (19) |
| N1 | 0.0329 (8) | 0.0290 (8) | 0.0302 (8) | 0.0016 (7) | 0.0037 (6) | 0.0034 (7) |
| O1 | 0.0336 (7) | 0.0355 (8) | 0.0467 (9) | 0.0018 (6) | 0.0031 (6) | 0.0056 (6) |
| O2 | 0.0512 (9) | 0.0328 (8) | 0.0409 (8) | −0.0017 (6) | 0.0122 (7) | −0.0002 (6) |
| O3 | 0.0861 (14) | 0.0758 (13) | 0.0491 (11) | 0.0261 (11) | 0.0269 (10) | 0.0305 (9) |
| O4 | 0.0591 (10) | 0.0297 (8) | 0.0707 (11) | 0.0048 (7) | −0.0174 (8) | −0.0095 (8) |
| O5 | 0.0441 (9) | 0.0358 (8) | 0.0600 (10) | 0.0039 (7) | −0.0103 (7) | −0.0022 (7) |
| C1 | 0.0360 (11) | 0.0328 (11) | 0.0417 (12) | 0.0064 (8) | 0.0034 (9) | 0.0061 (8) |
| C2 | 0.0417 (12) | 0.0431 (12) | 0.0542 (14) | 0.0126 (10) | 0.0188 (10) | 0.0065 (10) |
| C3 | 0.0455 (12) | 0.0393 (11) | 0.0395 (12) | 0.0036 (9) | 0.0154 (9) | 0.0055 (9) |
| C4 | 0.0337 (9) | 0.0255 (9) | 0.0295 (10) | −0.0002 (7) | 0.0016 (8) | 0.0005 (7) |
| C5 | 0.0333 (9) | 0.0314 (10) | 0.0313 (10) | 0.0041 (8) | 0.0047 (8) | 0.0004 (8) |
| Ni—O1i | 2.0828 (14) | O1—H1B | 0.8886 |
| Ni—O1 | 2.0828 (14) | O1—H1A | 0.8115 |
| Ni—O2i | 2.0739 (14) | O2—H2A | 0.8450 |
| Ni—O2 | 2.0739 (14) | O2—H2B | 0.8642 |
| Ni—N1i | 2.1026 (16) | C1—C2 | 1.370 (3) |
| Ni—N1 | 2.1026 (16) | C1—H1 | 0.9300 |
| S—O5 | 1.4412 (16) | C2—C3 | 1.384 (3) |
| S—O3 | 1.4438 (18) | C2—H2 | 0.9300 |
| S—O4 | 1.4445 (16) | C3—C4 | 1.381 (3) |
| S—C4 | 1.7788 (19) | C3—H3 | 0.9300 |
| N1—C1 | 1.341 (3) | C4—C5 | 1.379 (3) |
| N1—C5 | 1.341 (2) | C5—H5 | 0.9300 |
| O2i—Ni—O2 | 180.0 | C5—N1—Ni | 121.36 (13) |
| O2i—Ni—O1i | 89.12 (6) | Ni—O1—H1B | 114.4 |
| O2—Ni—O1i | 90.88 (6) | Ni—O1—H1A | 120.2 |
| O2i—Ni—O1 | 90.88 (6) | H1B—O1—H1A | 106.0 |
| O2—Ni—O1 | 89.12 (6) | Ni—O2—H2A | 124.1 |
| O1i—Ni—O1 | 180.0 | Ni—O2—H2B | 117.1 |
| O2i—Ni—N1i | 92.95 (6) | H2A—O2—H2B | 101.9 |
| O2—Ni—N1i | 87.05 (6) | N1—C1—C2 | 123.07 (19) |
| O1i—Ni—N1i | 92.61 (6) | N1—C1—H1 | 118.5 |
| O1—Ni—N1i | 87.39 (6) | C2—C1—H1 | 118.5 |
| O2i—Ni—N1 | 87.05 (6) | C1—C2—C3 | 119.6 (2) |
| O2—Ni—N1 | 92.95 (6) | C1—C2—H2 | 120.2 |
| O1i—Ni—N1 | 87.39 (6) | C3—C2—H2 | 120.2 |
| O1—Ni—N1 | 92.61 (6) | C4—C3—C2 | 117.6 (2) |
| N1i—Ni—N1 | 180.0 | C4—C3—H3 | 121.2 |
| O5—S—O3 | 114.30 (12) | C2—C3—H3 | 121.2 |
| O5—S—O4 | 112.45 (10) | C5—C4—C3 | 119.71 (18) |
| O3—S—O4 | 111.67 (12) | C5—C4—S | 119.06 (14) |
| O5—S—C4 | 106.36 (9) | C3—C4—S | 121.23 (15) |
| O3—S—C4 | 105.58 (10) | N1—C5—C4 | 122.60 (18) |
| O4—S—C4 | 105.69 (9) | N1—C5—H5 | 118.7 |
| C1—N1—C5 | 117.40 (17) | C4—C5—H5 | 118.7 |
| C1—N1—Ni | 121.22 (13) |
| H··· | ||||
| O1—H1A···O3ii | 0.81 | 2.39 | 3.162 (3) | 158 |
| O1—H1A···O4ii | 0.81 | 2.44 | 3.119 (2) | 142 |
| O1—H1B···O4iii | 0.89 | 1.83 | 2.722 (2) | 177 |
| O2—H2A···O3iv | 0.84 | 1.97 | 2.787 (2) | 163 |
| O2—H2B···O5v | 0.86 | 1.89 | 2.748 (2) | 174 |
| C1—H1···O4ii | 0.93 | 2.34 | 3.212 (3) | 155 |
Selected bond lengths (Å)
| Ni—O1 | 2.0828 (14) |
| Ni—O2 | 2.0739 (14) |
| Ni—N1 | 2.1026 (16) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.81 | 2.39 | 3.162 (3) | 158 |
| O1—H1 | 0.81 | 2.44 | 3.119 (2) | 142 |
| O1—H1 | 0.89 | 1.83 | 2.722 (2) | 177 |
| O2—H2 | 0.84 | 1.97 | 2.787 (2) | 163 |
| O2—H2 | 0.86 | 1.89 | 2.748 (2) | 174 |
| C1—H1⋯O4i | 0.93 | 2.34 | 3.212 (3) | 155 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .