Literature DB >> 21202179

Diaqua-dimethano-lbis[4-(1H-tetra-zol-1-yl)benzoato]zinc(II) dihydrate.

Shu-Ming Zhang1.   

Abstract

In the title compound, [Zn(C(8)H(5)N(4)O(2))(2)(CH(3)OH)(2)(H(2)O)(2)]·2H(2)O, the Zn(II) ion lies on an inversion centre and is coordinated by two O atoms from two 4-(tetra-zol-1-yl)benzoate ligands, two O atoms from two methanol mol-ecules and two O atoms from two water mol-ecules in a slightly distorted octa-hedral geometry. In addition, there are two uncoordinated water mol-ecules in the crystal structure. The crystal structure is stabilized by inter-molecular O-H⋯O hydrogen bonds.

Entities:  

Year:  2008        PMID: 21202179      PMCID: PMC2961137          DOI: 10.1107/S1600536808008490

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Zou et al. (2005 ▶); Dinca et al. (2006 ▶); Li et al. (2007 ▶); Zhang & Du (2007 ▶).

Experimental

Crystal data

[Zn(C8H5N4O2)2(CH4O)2(H2O)2]·2H2O M = 579.84 Monoclinic, a = 13.220 (3) Å b = 7.1551 (14) Å c = 12.636 (3) Å β = 90.24 (3)° V = 1195.3 (4) Å3 Z = 2 Mo Kα radiation μ = 1.10 mm−1 T = 293 (2) K 0.20 × 0.18 × 0.16 mm

Data collection

Bruker P4 diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.810, T max = 0.844 12254 measured reflections 2746 independent reflections 2359 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.076 S = 1.04 2746 reflections 188 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.29 e Å−3 Δρmin = −0.23 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808008490/at2552sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808008490/at2552Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C8H5N4O2)2(CH4O)2(H2O)2]·2H2OF000 = 600
Mr = 579.84Dx = 1.611 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 11248 reflections
a = 13.220 (3) Åθ = 3.1–27.6º
b = 7.1551 (14) ŵ = 1.10 mm1
c = 12.636 (3) ÅT = 293 (2) K
β = 90.24 (3)ºBlock, colourless
V = 1195.3 (4) Å30.20 × 0.18 × 0.16 mm
Z = 2
Bruker P4 diffractometer2746 independent reflections
Radiation source: fine-focus sealed tube2359 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.045
T = 293(2) Kθmax = 27.5º
ω scansθmin = 3.1º
Absorption correction: multi-scan(SADABS; Bruker, 1998)h = −17→17
Tmin = 0.810, Tmax = 0.844k = −9→9
12254 measured reflectionsl = −16→16
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.032  w = 1/[σ2(Fo2) + (0.0297P)2 + 0.5826P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.076(Δ/σ)max = 0.001
S = 1.04Δρmax = 0.29 e Å3
2746 reflectionsΔρmin = −0.23 e Å3
188 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0228 (12)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.50000.00001.00000.02298 (11)
O10.63696 (9)0.0452 (2)0.92928 (10)0.0313 (3)
O20.73211 (10)0.1468 (2)1.06367 (10)0.0399 (4)
C20.97854 (12)0.0991 (2)0.77039 (14)0.0231 (4)
N41.06694 (11)0.0940 (2)0.70586 (12)0.0243 (3)
C50.80990 (13)0.1028 (2)0.89760 (14)0.0228 (4)
N31.06465 (12)0.1453 (3)0.60316 (13)0.0339 (4)
C40.90418 (13)0.1480 (3)0.93867 (14)0.0259 (4)
H40.91040.17931.00980.031*
N11.21854 (12)0.0669 (3)0.64661 (14)0.0342 (4)
C70.88492 (14)0.0580 (3)0.72624 (15)0.0282 (4)
H70.87860.02940.65470.034*
C30.98863 (14)0.1470 (3)0.87560 (15)0.0274 (4)
H31.05160.17820.90350.033*
C80.71954 (13)0.0989 (3)0.96960 (14)0.0256 (4)
C11.16184 (14)0.0462 (3)0.72993 (16)0.0291 (4)
H11.18400.00470.79580.035*
C60.80137 (14)0.0608 (3)0.79125 (15)0.0279 (4)
H60.73800.03390.76290.033*
N21.15560 (13)0.1290 (3)0.56869 (14)0.0375 (4)
O30.54347 (11)−0.2616 (2)1.06193 (13)0.0380 (4)
C90.63908 (16)−0.3252 (3)1.0949 (2)0.0470 (6)
H9A0.6907−0.25791.05780.071*
H9B0.6451−0.45631.07990.071*
H9C0.6467−0.30501.16960.071*
O2W0.43377 (14)0.4734 (2)0.16558 (13)0.0340 (3)
O1W0.54904 (11)0.14327 (19)1.13919 (10)0.0289 (3)
H1WA0.54710.07181.18980.043*
H2WA0.378 (2)0.457 (4)0.156 (2)0.053 (9)*
H2WB0.463 (2)0.382 (4)0.156 (2)0.061 (10)*
H1WB0.612 (2)0.155 (4)1.121 (2)0.058 (8)*
H3M0.5060 (19)−0.325 (4)1.088 (2)0.047 (8)*
U11U22U33U12U13U23
Zn10.01705 (16)0.02848 (18)0.02340 (17)0.00002 (12)−0.00056 (11)0.00133 (13)
O10.0173 (6)0.0487 (9)0.0279 (7)−0.0049 (6)0.0003 (5)0.0000 (6)
O20.0265 (7)0.0670 (11)0.0261 (7)−0.0095 (7)0.0019 (6)−0.0061 (7)
C20.0174 (9)0.0241 (9)0.0279 (9)−0.0001 (7)0.0021 (7)0.0030 (7)
N40.0191 (7)0.0275 (8)0.0261 (8)0.0008 (6)−0.0003 (6)0.0027 (7)
C50.0184 (8)0.0231 (9)0.0270 (9)−0.0014 (7)0.0000 (7)0.0016 (7)
N30.0277 (9)0.0455 (10)0.0284 (9)0.0043 (7)0.0021 (7)0.0072 (8)
C40.0240 (9)0.0310 (10)0.0227 (9)−0.0040 (7)−0.0023 (7)0.0004 (8)
N10.0239 (9)0.0384 (9)0.0403 (10)0.0029 (7)0.0040 (7)0.0031 (8)
C70.0244 (9)0.0352 (10)0.0249 (9)−0.0018 (8)−0.0025 (8)−0.0039 (8)
C30.0190 (9)0.0330 (10)0.0301 (10)−0.0040 (7)−0.0053 (7)0.0009 (8)
C80.0199 (9)0.0283 (10)0.0287 (10)−0.0013 (7)−0.0004 (7)0.0038 (8)
C10.0214 (9)0.0331 (11)0.0328 (10)0.0023 (7)−0.0020 (8)0.0010 (8)
C60.0179 (9)0.0362 (10)0.0294 (10)−0.0033 (7)−0.0039 (7)−0.0030 (8)
N20.0290 (9)0.0478 (11)0.0358 (10)0.0035 (8)0.0080 (7)0.0093 (8)
O30.0261 (7)0.0373 (9)0.0505 (9)0.0028 (7)−0.0007 (7)0.0194 (7)
C90.0323 (12)0.0468 (14)0.0620 (15)0.0093 (10)−0.0041 (11)0.0120 (12)
O2W0.0277 (8)0.0361 (9)0.0382 (8)−0.0020 (7)0.0031 (7)−0.0057 (7)
O1W0.0251 (7)0.0359 (8)0.0257 (7)0.0002 (6)0.0004 (6)0.0029 (6)
Zn1—O12.0483 (14)C4—H40.9300
Zn1—O1i2.0483 (14)N1—C11.304 (3)
Zn1—O32.1078 (15)N1—N21.361 (2)
Zn1—O3i2.1078 (15)C7—C61.379 (3)
Zn1—O1Wi2.1342 (14)C7—H70.9300
Zn1—O1W2.1342 (14)C3—H30.9300
O1—C81.263 (2)C1—H10.9300
O2—C81.247 (2)C6—H60.9300
C2—C31.379 (3)O3—C91.405 (2)
C2—C71.387 (2)O3—H3M0.75 (3)
C2—N41.428 (2)C9—H9A0.9600
N4—C11.334 (2)C9—H9B0.9600
N4—N31.349 (2)C9—H9C0.9600
C5—C61.381 (3)O2W—H2WA0.75 (3)
C5—C41.386 (2)O2W—H2WB0.77 (3)
C5—C81.505 (2)O1W—H1WA0.8200
N3—N21.286 (2)O1W—H1WB0.87 (3)
C4—C31.375 (3)
O1—Zn1—O1i180.00 (3)C6—C7—C2118.22 (17)
O1—Zn1—O393.56 (6)C6—C7—H7120.9
O1i—Zn1—O386.44 (6)C2—C7—H7120.9
O1—Zn1—O3i86.44 (6)C4—C3—C2119.00 (17)
O1i—Zn1—O3i93.56 (6)C4—C3—H3120.5
O3—Zn1—O3i180.0C2—C3—H3120.5
O1—Zn1—O1Wi88.98 (6)O2—C8—O1125.41 (17)
O1i—Zn1—O1Wi91.02 (6)O2—C8—C5117.92 (16)
O3—Zn1—O1Wi87.75 (6)O1—C8—C5116.66 (16)
O3i—Zn1—O1Wi92.25 (6)N1—C1—N4109.28 (17)
O1—Zn1—O1W91.02 (6)N1—C1—H1125.4
O1i—Zn1—O1W88.98 (6)N4—C1—H1125.4
O3—Zn1—O1W92.25 (6)C7—C6—C5121.35 (17)
O3i—Zn1—O1W87.75 (6)C7—C6—H6119.3
O1Wi—Zn1—O1W180.0C5—C6—H6119.3
C8—O1—Zn1129.52 (12)N3—N2—N1110.75 (16)
C3—C2—C7121.54 (17)C9—O3—Zn1129.90 (14)
C3—C2—N4118.74 (16)C9—O3—H3M105 (2)
C7—C2—N4119.72 (16)Zn1—O3—H3M122 (2)
C1—N4—N3107.84 (15)O3—C9—H9A109.5
C1—N4—C2130.34 (16)O3—C9—H9B109.5
N3—N4—C2121.81 (15)H9A—C9—H9B109.5
C6—C5—C4118.98 (17)O3—C9—H9C109.5
C6—C5—C8121.50 (16)H9A—C9—H9C109.5
C4—C5—C8119.52 (16)H9B—C9—H9C109.5
N2—N3—N4106.50 (15)H2WA—O2W—H2WB109 (3)
C3—C4—C5120.86 (17)Zn1—O1W—H1WA109.5
C3—C4—H4119.6Zn1—O1W—H1WB96.5 (17)
C5—C4—H4119.6H1WA—O1W—H1WB107.7
C1—N1—N2105.63 (15)
O1i—Zn1—O1—C873 (100)Zn1—O1—C8—C5174.81 (12)
O3—Zn1—O1—C8−78.56 (17)C6—C5—C8—O2−176.77 (19)
O3i—Zn1—O1—C8101.44 (17)C4—C5—C8—O23.7 (3)
O1Wi—Zn1—O1—C8−166.24 (17)C6—C5—C8—O13.9 (3)
O1W—Zn1—O1—C813.76 (17)C4—C5—C8—O1−175.56 (17)
C3—C2—N4—C133.9 (3)N2—N1—C1—N4−0.2 (2)
C7—C2—N4—C1−146.7 (2)N3—N4—C1—N10.4 (2)
C3—C2—N4—N3−144.73 (19)C2—N4—C1—N1−178.39 (18)
C7—C2—N4—N334.7 (3)C2—C7—C6—C5−0.2 (3)
C1—N4—N3—N2−0.4 (2)C4—C5—C6—C71.8 (3)
C2—N4—N3—N2178.53 (17)C8—C5—C6—C7−177.68 (18)
C6—C5—C4—C3−1.5 (3)N4—N3—N2—N10.2 (2)
C8—C5—C4—C3177.97 (17)C1—N1—N2—N30.0 (2)
C3—C2—C7—C6−1.8 (3)O1—Zn1—O3—C931.19 (19)
N4—C2—C7—C6178.77 (17)O1i—Zn1—O3—C9−148.81 (19)
C5—C4—C3—C2−0.4 (3)O3i—Zn1—O3—C9−165 (73)
C7—C2—C3—C42.1 (3)O1Wi—Zn1—O3—C9120.04 (19)
N4—C2—C3—C4−178.49 (17)O1W—Zn1—O3—C9−59.96 (19)
Zn1—O1—C8—O2−4.4 (3)
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O2Wii0.821.972.759 (2)160
O2W—H2WB···O1Wiii0.77 (3)2.07 (3)2.831 (2)175 (3)
O3—H3M···O2Wiv0.75 (3)1.99 (3)2.726 (2)167 (3)
Zn1—O12.0483 (14)
Zn1—O32.1078 (15)
Zn1—O1W2.1342 (14)
O1—Zn1—O393.56 (6)
O1—Zn1—O1W91.02 (6)
O3—Zn1—O1W92.25 (6)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O2Wi0.821.972.759 (2)160
O2W—H2WB⋯O1Wii0.77 (3)2.07 (3)2.831 (2)175 (3)
O3—H3M⋯O2Wiii0.75 (3)1.99 (3)2.726 (2)167 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A pcu-type metal-organic framework with spindle [Zn7(OH)8]6+ cluster as secondary building units.

Authors:  Jian-Rong Li; Ying Tao; Qun Yu; Xian-He Bu
Journal:  Chem Commun (Camb)       Date:  2007-02-06       Impact factor: 6.222

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Hydrogen storage in a microporous metal-organic framework with exposed Mn2+ coordination sites.

Authors:  Mircea Dincă; Anne Dailly; Yun Liu; Craig M Brown; Dan A Neumann; Jeffrey R Long
Journal:  J Am Chem Soc       Date:  2006-12-27       Impact factor: 15.419

  3 in total

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