| Literature DB >> 21202161 |
Graeme J Gainsford1, Tim Kemmitt, Caleb Higham.
Abstract
THE TITLE COMPOUND, SODIUM TETRABORATE DECAHYDRATE (MINERAL NAME: borax), Na(2)[B(4)O(5)(OH)(4)]·8H(2)O, has been studied previously using X-ray [Morimoto (1956). Miner. J.2, 1-18] and neutron [Levy & Lisensky (1978). Acta Cryst. B34, 3502-3510] diffraction data. The structure contains tetra-borate anions [B(4)O(5)(OH)(4)](2-) with twofold rotation symmetry, which form hydrogen-bonded chains, and [Na(H(2)O)(6)] octa-hedra that form zigzag chains [Na(H(2)O)(4/2)(H(2)O)(2/1)]. The O-H bond distances obtained from the present redetermination at 145 K are shorter than those in the neutron study by an average of 0.127 (19) Å.Entities:
Year: 2008 PMID: 21202161 PMCID: PMC2961317 DOI: 10.1107/S1600536808010441
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| Na2[B4O5(OH)4]·8H2O | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 6688 reflections |
| θ = 2.6–31.9º | |
| µ = 0.22 mm−1 | |
| β = 106.790 (2)º | Prism, colourless |
| 0.65 × 0.36 × 0.26 mm | |
| Bruker–Nonius APEX2 CCD area-detector diffractometer | 2275 independent reflections |
| Radiation source: fine-focus sealed tube | 2137 reflections with |
| Monochromator: graphite | |
| Detector resolution: 8.192 pixels mm-1 | θmax = 33.2º |
| θmin = 2.6º | |
| φ and ω scans | |
| Absorption correction: multi-scan(SADABS; Bruker, 2006) | |
| 8429 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| All H-atom parameters refined | |
| | |
| (Δ/σ)max = 0.001 | |
| 2275 reflections | Δρmax = 0.37 e Å−3 |
| 147 parameters | Δρmin = −0.22 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Na1 | 0.0000 | 0.0000 | 0.0000 | 0.01676 (10) | |
| Na2 | 0.0000 | 0.84795 (4) | 0.2500 | 0.01796 (11) | |
| B1 | 0.08552 (6) | 0.34499 (6) | 0.21553 (5) | 0.01044 (13) | |
| B2 | 0.09847 (6) | 0.45643 (6) | 0.39269 (6) | 0.01154 (13) | |
| O1 | 0.0000 | 0.26659 (6) | 0.2500 | 0.01094 (13) | |
| O2 | 0.15546 (4) | 0.41927 (4) | 0.31574 (4) | 0.01276 (11) | |
| O3 | 0.01964 (4) | 0.43573 (4) | 0.12445 (4) | 0.01339 (11) | |
| O4 | 0.16140 (4) | 0.27014 (5) | 0.16772 (4) | 0.01570 (11) | |
| O5 | 0.16369 (4) | 0.51522 (5) | 0.49130 (4) | 0.01815 (12) | |
| O6 | 0.12357 (5) | 0.84607 (5) | 0.44846 (5) | 0.01851 (12) | |
| O7 | 0.12296 (5) | 0.00117 (5) | 0.19548 (5) | 0.01799 (12) | |
| O8 | 0.11919 (5) | 0.16556 (5) | 0.46252 (5) | 0.02067 (12) | |
| O9 | 0.11746 (5) | 0.70654 (6) | 0.17227 (5) | 0.02187 (12) | |
| H4 | 0.7717 (12) | 0.2622 (11) | 0.2876 (12) | 0.032 (3)* | |
| H5 | 0.1187 (13) | 0.4667 (13) | 0.0305 (12) | 0.040 (3)* | |
| H6A | 0.3089 (13) | 0.3828 (14) | 0.0413 (12) | 0.042 (4)* | |
| H6B | 0.8662 (14) | 0.2018 (16) | 0.4941 (13) | 0.051 (4)* | |
| H7A | 0.3098 (13) | 0.4817 (11) | 0.3051 (12) | 0.030 (3)* | |
| H7B | 0.1304 (12) | 0.0776 (14) | 0.2014 (12) | 0.039 (3)* | |
| H8A | 0.9099 (12) | 0.1906 (13) | 0.1075 (11) | 0.036 (3)* | |
| H8B | 0.8131 (12) | 0.1365 (12) | 0.0352 (11) | 0.034 (3)* | |
| H9A | 0.4018 (13) | 0.1300 (15) | 0.3385 (12) | 0.046 (4)* | |
| H9B | 0.6140 (15) | 0.2331 (15) | 0.1058 (14) | 0.053 (4)* |
| Na1 | 0.0165 (2) | 0.01812 (19) | 0.0158 (2) | 0.00057 (13) | 0.00485 (15) | 0.00047 (13) |
| Na2 | 0.0179 (2) | 0.0201 (2) | 0.0176 (2) | 0.000 | 0.00773 (16) | 0.000 |
| B1 | 0.0100 (3) | 0.0121 (3) | 0.0096 (3) | 0.0012 (2) | 0.0035 (2) | −0.00028 (19) |
| B2 | 0.0108 (3) | 0.0133 (3) | 0.0111 (3) | −0.0014 (2) | 0.0040 (2) | −0.0014 (2) |
| O1 | 0.0117 (3) | 0.0104 (3) | 0.0111 (3) | 0.000 | 0.0037 (2) | 0.000 |
| O2 | 0.0103 (2) | 0.0168 (2) | 0.0122 (2) | −0.00223 (15) | 0.00493 (16) | −0.00376 (15) |
| O3 | 0.0103 (2) | 0.0180 (2) | 0.0130 (2) | 0.00309 (15) | 0.00519 (16) | 0.00559 (15) |
| O4 | 0.0119 (2) | 0.0209 (2) | 0.0142 (2) | 0.00489 (17) | 0.00365 (17) | −0.00434 (16) |
| O5 | 0.0132 (2) | 0.0275 (3) | 0.0150 (2) | −0.00595 (18) | 0.00593 (19) | −0.00949 (18) |
| O6 | 0.0146 (2) | 0.0219 (2) | 0.0186 (2) | −0.00109 (18) | 0.00414 (19) | 0.00229 (18) |
| O7 | 0.0151 (3) | 0.0160 (2) | 0.0232 (3) | 0.00012 (17) | 0.0061 (2) | 0.00003 (17) |
| O8 | 0.0185 (3) | 0.0242 (3) | 0.0184 (3) | 0.00116 (19) | 0.0039 (2) | 0.00608 (19) |
| O9 | 0.0217 (3) | 0.0196 (2) | 0.0229 (3) | −0.00047 (19) | 0.0041 (2) | −0.00352 (19) |
| Na1—O8i | 2.3815 (6) | Na2—O6ii | 2.4441 (6) |
| Na1—O8ii | 2.3815 (6) | Na2—O6 | 2.4441 (6) |
| Na1—O6iii | 2.3979 (5) | B1—O4 | 1.4451 (8) |
| Na1—O6iv | 2.3979 (5) | B1—O1 | 1.4657 (7) |
| Na1—O7v | 2.4121 (6) | B1—O2 | 1.4902 (8) |
| Na1—O7 | 2.4121 (6) | B1—O3 | 1.5075 (8) |
| Na2—O7vi | 2.4041 (6) | B2—O2 | 1.3655 (8) |
| Na2—O7vii | 2.4041 (6) | B2—O3ii | 1.3757 (8) |
| Na2—O9 | 2.4214 (6) | B2—O5 | 1.3784 (8) |
| Na2—O9ii | 2.4214 (6) | ||
| O8i—Na1—O8ii | 180.00 (2) | O9—Na2—O6ii | 81.696 (19) |
| O8i—Na1—O6iii | 90.45 (2) | O9ii—Na2—O6ii | 97.72 (2) |
| O8ii—Na1—O6iii | 89.55 (2) | O7vi—Na2—O6 | 88.29 (2) |
| O8i—Na1—O6iv | 89.55 (2) | O7vii—Na2—O6 | 92.34 (2) |
| O8ii—Na1—O6iv | 90.45 (2) | O9—Na2—O6 | 97.72 (2) |
| O6iii—Na1—O6iv | 180.00 (3) | O9ii—Na2—O6 | 81.70 (2) |
| O8i—Na1—O7v | 91.717 (19) | O6ii—Na2—O6 | 179.07 (3) |
| O8ii—Na1—O7v | 88.283 (19) | O4—B1—O1 | 111.72 (5) |
| O6iii—Na1—O7v | 89.177 (19) | O4—B1—O2 | 110.91 (5) |
| O6iv—Na1—O7v | 90.823 (19) | O1—B1—O2 | 109.42 (4) |
| O8i—Na1—O7 | 88.283 (19) | O4—B1—O3 | 107.71 (5) |
| O8ii—Na1—O7 | 91.717 (19) | O1—B1—O3 | 108.56 (5) |
| O6iii—Na1—O7 | 90.823 (19) | O2—B1—O3 | 108.43 (5) |
| O6iv—Na1—O7 | 89.177 (19) | O2—B2—O3ii | 122.44 (6) |
| O7v—Na1—O7 | 180.000 (16) | O2—B2—O5 | 117.78 (6) |
| O7vi—Na2—O7vii | 94.98 (3) | O3ii—B2—O5 | 119.78 (6) |
| O7vi—Na2—O9 | 172.90 (2) | B1ii—O1—B1 | 110.90 (6) |
| O7vii—Na2—O9 | 81.05 (2) | B2—O2—B1 | 116.59 (5) |
| O7vi—Na2—O9ii | 81.05 (2) | B2ii—O3—B1 | 120.25 (5) |
| O7vii—Na2—O9ii | 172.90 (2) | Na1vi—O6—Na2 | 90.952 (19) |
| O9—Na2—O9ii | 103.49 (3) | Na2viii—O7—Na1 | 91.581 (19) |
| O7vi—Na2—O6ii | 92.34 (2) | Na2viii—O7—H7B | 134.8 (10) |
| O7vii—Na2—O6ii | 88.29 (2) | Na1—O7—H7B | 96.4 (10) |
| O4—B1—O1—B1ii | −172.74 (6) | O7vi—Na2—O6—Na1vi | −0.355 (19) |
| O2—B1—O1—B1ii | 64.05 (4) | O7vii—Na2—O6—Na1vi | 94.56 (2) |
| O3—B1—O1—B1ii | −54.12 (3) | O9—Na2—O6—Na1vi | 175.84 (2) |
| O3ii—B2—O2—B1 | −4.91 (9) | O9ii—Na2—O6—Na1vi | −81.56 (2) |
| O5—B2—O2—B1 | 174.23 (5) | O6ii—Na2—O6—Na1vi | −132.911 (15) |
| O4—B1—O2—B2 | −156.88 (5) | O8i—Na1—O7—Na2viii | −89.93 (2) |
| O1—B1—O2—B2 | −33.19 (7) | O8ii—Na1—O7—Na2viii | 90.07 (2) |
| O3—B1—O2—B2 | 85.06 (6) | O6iii—Na1—O7—Na2viii | 179.640 (19) |
| O4—B1—O3—B2ii | 136.95 (6) | O6iv—Na1—O7—Na2viii | −0.360 (19) |
| O1—B1—O3—B2ii | 15.82 (7) | O7v—Na1—O7—Na2viii | −122 (44) |
| O2—B1—O3—B2ii | −102.97 (6) |
| H··· | ||||
| O5—H5ix···O3ix | 0.836 (15) | 1.895 (15) | 2.7300 (7) | 176.3 (15) |
| O4x—H4···O9xi | 0.828 (14) | 2.049 (14) | 2.8658 (8) | 168.4 (12) |
| O6—H6Axii···O5xiii | 0.868 (16) | 1.978 (16) | 2.8323 (8) | 167.9 (14) |
| O6xiv—H6B···O4x | 0.846 (16) | 2.040 (15) | 2.8624 (8) | 163.9 (16) |
| O7xii—H7A···O2 | 0.827 (16) | 1.989 (16) | 2.8135 (8) | 174.1 (12) |
| O7—H7B···O4 | 0.816 (15) | 2.135 (15) | 2.9233 (8) | 162.3 (14) |
| O8x—H8A···O1xv | 0.866 (13) | 1.936 (13) | 2.7865 (6) | 167.0 (14) |
| O8x—H8B···O5xvi | 0.855 (15) | 2.341 (14) | 3.1320 (8) | 154.2 (12) |
| O9—H9Axii···O3 | 0.843 (16) | 2.253 (16) | 3.0894 (8) | 171.7 (15) |
| O9—H9Bxvii···O8iii | 0.849 (17) | 2.069 (16) | 2.9034 (8) | 167.4 (15) |
Selected bond lengths (Å)
| Na1—O8i | 2.3815 (6) |
| Na1—O6ii | 2.3979 (5) |
| Na1—O7 | 2.4121 (6) |
| Na2—O7iii | 2.4041 (6) |
| Na2—O9 | 2.4214 (6) |
| Na2—O6 | 2.4441 (6) |
| B1—O4 | 1.4451 (8) |
| B1—O1 | 1.4657 (7) |
| B1—O2 | 1.4902 (8) |
| B1—O3 | 1.5075 (8) |
| B2—O2 | 1.3655 (8) |
| B2—O3i | 1.3757 (8) |
| B2—O5 | 1.3784 (8) |
Symmetry codes: (i) ; (ii) ; (iii) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H5iv⋯O3iv | 0.836 (15) | 1.895 (15) | 2.7300 (7) | 176.3 (15) |
| O4v—H4⋯O9vi | 0.828 (14) | 2.049 (14) | 2.8658 (8) | 168.4 (12) |
| O6—H6 | 0.868 (16) | 1.978 (16) | 2.8323 (8) | 167.9 (14) |
| O6ix—H6 | 0.846 (16) | 2.040 (15) | 2.8624 (8) | 163.9 (16) |
| O7vii—H7 | 0.827 (16) | 1.989 (16) | 2.8135 (8) | 174.1 (12) |
| O7—H7 | 0.816 (15) | 2.135 (15) | 2.9233 (8) | 162.3 (14) |
| O8v—H8 | 0.866 (13) | 1.936 (13) | 2.7865 (6) | 167.0 (14) |
| O8v—H8 | 0.855 (15) | 2.341 (14) | 3.1320 (8) | 154.2 (12) |
| O9—H9 | 0.843 (16) | 2.253 (16) | 3.0894 (8) | 171.7 (15) |
| O9—H9 | 0.849 (17) | 2.069 (16) | 2.9034 (8) | 167.4 (15) |
Symmetry codes: (iv) ; (v) ; (vi) ; (vii) ; (viii) ; (ix) ; (x) ; (xi) ; (xii) ; (xiii) .