| Literature DB >> 21202132 |
Lian-Shan Yuan1, Xiang Li, Cheng Yao.
Abstract
The title compound, C(13)H(16)N(2)O(5), is useful as an inter-mediate in the field of agrochemicals. Intra-molecular C-H⋯O hydrogen bonds result in the formation of one six- and one five-membered nearly planar ring; the six-membered ring is also nearly coplanar with the adjacent benzene ring. In the crystal structure, inter-molecular C-H⋯O hydrogen bonds link the mol-ecules.Entities:
Year: 2008 PMID: 21202132 PMCID: PMC2960971 DOI: 10.1107/S1600536808005576
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H16N2O5 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 25 reflections | |
| θ = 9–14º | |
| µ = 0.11 mm−1 | |
| α = 81.06 (3)º | |
| β = 78.48 (3)º | Block, colorless |
| γ = 68.39 (3)º | 0.30 × 0.20 × 0.10 mm |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 26.0º |
| Monochromator: graphite | θmin = 1.8º |
| ω/2θ scans | |
| Absorption correction: ψ scan(North | |
| 3 standard reflections | |
| 2919 measured reflections | every 120 min |
| 2704 independent reflections | intensity decay: none |
| 1650 reflections with |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 2704 reflections | Δρmax = 0.20 e Å−3 |
| 181 parameters | Δρmin = −0.18 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.2769 (4) | −0.1219 (3) | −0.0125 (2) | 0.0492 (6) | |
| H1A | 0.3013 | −0.2242 | 0.0119 | 0.059* | |
| O1 | 0.2083 (4) | 0.0590 (3) | −0.1748 (2) | 0.0845 (9) | |
| C1 | 0.2766 (5) | −0.3253 (4) | −0.3938 (3) | 0.0681 (10) | |
| H1B | 0.2607 | −0.2909 | −0.4769 | 0.102* | |
| H1C | 0.1823 | −0.3727 | −0.3551 | 0.102* | |
| H1D | 0.4016 | −0.4056 | −0.3901 | 0.102* | |
| N2 | 0.1750 (4) | 0.4161 (3) | 0.1056 (2) | 0.0454 (6) | |
| O2 | 0.0124 (3) | 0.5069 (2) | 0.1365 (2) | 0.0693 (7) | |
| C2 | 0.2531 (5) | −0.1773 (4) | −0.3296 (3) | 0.0520 (8) | |
| H2A | 0.3459 | −0.1278 | −0.3706 | 0.062* | |
| H2B | 0.1270 | −0.0962 | −0.3341 | 0.062* | |
| O3 | 0.3005 (3) | 0.4618 (3) | 0.0453 (2) | 0.0634 (7) | |
| C3 | 0.2792 (4) | −0.2244 (3) | −0.1980 (2) | 0.0454 (7) | |
| H3A | 0.1893 | −0.2776 | −0.1582 | 0.054* | |
| H3B | 0.4066 | −0.3034 | −0.1941 | 0.054* | |
| O4 | 0.2265 (3) | 0.1922 (2) | 0.46212 (17) | 0.0595 (6) | |
| C4 | 0.2510 (4) | −0.0805 (3) | −0.1302 (2) | 0.0445 (7) | |
| O5 | 0.2355 (3) | 0.4105 (2) | 0.33631 (17) | 0.0585 (6) | |
| C5 | 0.2695 (4) | −0.0219 (3) | 0.0744 (2) | 0.0397 (6) | |
| C6 | 0.2311 (4) | 0.1466 (3) | 0.0483 (2) | 0.0383 (6) | |
| H6A | 0.2122 | 0.1962 | −0.0291 | 0.046* | |
| C7 | 0.2217 (4) | 0.2382 (3) | 0.1391 (2) | 0.0356 (6) | |
| C8 | 0.2483 (4) | 0.1712 (3) | 0.2565 (2) | 0.0394 (6) | |
| C9 | 0.2896 (4) | 0.0022 (3) | 0.2777 (2) | 0.0461 (7) | |
| H9A | 0.3106 | −0.0474 | 0.3548 | 0.055* | |
| C10 | 0.3010 (4) | −0.0948 (3) | 0.1907 (2) | 0.0456 (7) | |
| C11 | 0.3466 (7) | −0.2777 (4) | 0.2205 (3) | 0.0822 (13) | |
| H11A | 0.3653 | −0.3065 | 0.3035 | 0.123* | |
| H11B | 0.4607 | −0.3358 | 0.1691 | 0.123* | |
| H11C | 0.2428 | −0.3069 | 0.2079 | 0.123* | |
| C12 | 0.2353 (4) | 0.2736 (3) | 0.3534 (2) | 0.0402 (6) | |
| C13 | 0.2136 (6) | 0.2797 (4) | 0.5634 (3) | 0.0723 (11) | |
| H13A | 0.2095 | 0.2093 | 0.6370 | 0.108* | |
| H13B | 0.0999 | 0.3754 | 0.5674 | 0.108* | |
| H13C | 0.3230 | 0.3125 | 0.5531 | 0.108* |
| N1 | 0.0804 (19) | 0.0346 (12) | 0.0354 (12) | −0.0212 (12) | −0.0131 (12) | −0.0035 (9) |
| O1 | 0.165 (3) | 0.0436 (13) | 0.0494 (13) | −0.0360 (15) | −0.0326 (15) | 0.0018 (10) |
| C1 | 0.090 (3) | 0.072 (2) | 0.0495 (19) | −0.032 (2) | −0.0078 (18) | −0.0197 (16) |
| N2 | 0.0652 (17) | 0.0380 (13) | 0.0380 (13) | −0.0210 (13) | −0.0154 (12) | −0.0009 (10) |
| O2 | 0.0695 (16) | 0.0383 (12) | 0.0819 (17) | 0.0019 (11) | −0.0134 (13) | −0.0029 (11) |
| C2 | 0.059 (2) | 0.0473 (16) | 0.0487 (17) | −0.0144 (14) | −0.0101 (15) | −0.0114 (13) |
| O3 | 0.0922 (18) | 0.0483 (12) | 0.0568 (13) | −0.0405 (12) | −0.0019 (12) | 0.0022 (10) |
| C3 | 0.0543 (18) | 0.0422 (15) | 0.0443 (16) | −0.0216 (13) | −0.0042 (13) | −0.0099 (12) |
| O4 | 0.1073 (18) | 0.0430 (11) | 0.0345 (11) | −0.0323 (11) | −0.0149 (11) | −0.0013 (9) |
| C4 | 0.0537 (18) | 0.0375 (15) | 0.0423 (16) | −0.0169 (13) | −0.0060 (13) | −0.0029 (12) |
| O5 | 0.1011 (18) | 0.0393 (11) | 0.0447 (12) | −0.0343 (11) | −0.0136 (11) | −0.0036 (9) |
| C5 | 0.0521 (17) | 0.0328 (13) | 0.0365 (14) | −0.0161 (12) | −0.0063 (12) | −0.0072 (11) |
| C6 | 0.0496 (17) | 0.0333 (13) | 0.0312 (13) | −0.0133 (12) | −0.0063 (12) | −0.0035 (10) |
| C7 | 0.0435 (16) | 0.0272 (12) | 0.0377 (14) | −0.0140 (11) | −0.0081 (12) | −0.0007 (10) |
| C8 | 0.0469 (17) | 0.0336 (13) | 0.0402 (15) | −0.0168 (12) | −0.0065 (12) | −0.0036 (11) |
| C9 | 0.071 (2) | 0.0356 (14) | 0.0319 (14) | −0.0193 (14) | −0.0096 (13) | 0.0002 (11) |
| C10 | 0.070 (2) | 0.0306 (13) | 0.0362 (14) | −0.0193 (13) | −0.0060 (13) | −0.0003 (11) |
| C11 | 0.164 (4) | 0.0358 (16) | 0.0499 (19) | −0.035 (2) | −0.026 (2) | 0.0017 (14) |
| C12 | 0.0459 (17) | 0.0356 (14) | 0.0384 (15) | −0.0138 (12) | −0.0063 (12) | −0.0028 (11) |
| C13 | 0.129 (3) | 0.0519 (19) | 0.0386 (18) | −0.032 (2) | −0.0169 (19) | −0.0070 (14) |
| N1—C4 | 1.361 (3) | O4—C13 | 1.446 (3) |
| N1—C5 | 1.398 (3) | O5—C12 | 1.190 (3) |
| N1—H1A | 0.8600 | C5—C6 | 1.394 (3) |
| O1—C4 | 1.202 (3) | C5—C10 | 1.399 (4) |
| C1—C2 | 1.524 (4) | C6—C7 | 1.377 (3) |
| C1—H1B | 0.9600 | C6—H6A | 0.9300 |
| C1—H1C | 0.9600 | C7—C8 | 1.391 (3) |
| C1—H1D | 0.9600 | C8—C9 | 1.391 (4) |
| N2—O3 | 1.218 (3) | C8—C12 | 1.490 (4) |
| N2—O2 | 1.218 (3) | C9—C10 | 1.370 (4) |
| N2—C7 | 1.474 (3) | C9—H9A | 0.9300 |
| C2—C3 | 1.516 (4) | C10—C11 | 1.512 (4) |
| C2—H2A | 0.9700 | C11—H11A | 0.9600 |
| C2—H2B | 0.9700 | C11—H11B | 0.9600 |
| C3—C4 | 1.507 (4) | C11—H11C | 0.9600 |
| C3—H3A | 0.9700 | C13—H13A | 0.9600 |
| C3—H3B | 0.9700 | C13—H13B | 0.9600 |
| O4—C12 | 1.327 (3) | C13—H13C | 0.9600 |
| C4—N1—C5 | 129.3 (2) | C7—C6—C5 | 118.9 (2) |
| C4—N1—H1A | 115.4 | C7—C6—H6A | 120.6 |
| C5—N1—H1A | 115.4 | C5—C6—H6A | 120.6 |
| C2—C1—H1B | 109.5 | C6—C7—C8 | 123.3 (2) |
| C2—C1—H1C | 109.5 | C6—C7—N2 | 115.7 (2) |
| H1B—C1—H1C | 109.5 | C8—C7—N2 | 121.0 (2) |
| C2—C1—H1D | 109.5 | C7—C8—C9 | 115.8 (2) |
| H1B—C1—H1D | 109.5 | C7—C8—C12 | 122.1 (2) |
| H1C—C1—H1D | 109.5 | C9—C8—C12 | 122.1 (2) |
| O3—N2—O2 | 124.3 (2) | C10—C9—C8 | 123.4 (3) |
| O3—N2—C7 | 117.5 (2) | C10—C9—H9A | 118.3 |
| O2—N2—C7 | 118.1 (2) | C8—C9—H9A | 118.3 |
| C3—C2—C1 | 112.0 (3) | C9—C10—C5 | 119.0 (2) |
| C3—C2—H2A | 109.2 | C9—C10—C11 | 120.3 (2) |
| C1—C2—H2A | 109.2 | C5—C10—C11 | 120.7 (2) |
| C3—C2—H2B | 109.2 | C10—C11—H11A | 109.5 |
| C1—C2—H2B | 109.2 | C10—C11—H11B | 109.5 |
| H2A—C2—H2B | 107.9 | H11A—C11—H11B | 109.5 |
| C4—C3—C2 | 113.6 (2) | C10—C11—H11C | 109.5 |
| C4—C3—H3A | 108.8 | H11A—C11—H11C | 109.5 |
| C2—C3—H3A | 108.8 | H11B—C11—H11C | 109.5 |
| C4—C3—H3B | 108.8 | O5—C12—O4 | 123.6 (2) |
| C2—C3—H3B | 108.8 | O5—C12—C8 | 124.7 (2) |
| H3A—C3—H3B | 107.7 | O4—C12—C8 | 111.7 (2) |
| C12—O4—C13 | 116.5 (2) | O4—C13—H13A | 109.5 |
| O1—C4—N1 | 122.4 (3) | O4—C13—H13B | 109.5 |
| O1—C4—C3 | 123.6 (3) | H13A—C13—H13B | 109.5 |
| N1—C4—C3 | 114.0 (2) | O4—C13—H13C | 109.5 |
| C6—C5—N1 | 122.0 (2) | H13A—C13—H13C | 109.5 |
| C6—C5—C10 | 119.7 (2) | H13B—C13—H13C | 109.5 |
| N1—C5—C10 | 118.3 (2) | ||
| C1—C2—C3—C4 | −178.2 (3) | C6—C7—C8—C12 | −179.3 (3) |
| C5—N1—C4—O1 | −3.1 (5) | N2—C7—C8—C12 | −1.3 (4) |
| C5—N1—C4—C3 | 177.3 (3) | C7—C8—C9—C10 | −1.1 (4) |
| C2—C3—C4—O1 | 1.4 (4) | C12—C8—C9—C10 | 179.5 (3) |
| C2—C3—C4—N1 | −179.1 (3) | C8—C9—C10—C5 | −0.1 (5) |
| C4—N1—C5—C6 | 0.1 (5) | C8—C9—C10—C11 | 180.0 (3) |
| C4—N1—C5—C10 | 179.8 (3) | C6—C5—C10—C9 | 1.3 (4) |
| N1—C5—C6—C7 | 178.5 (3) | N1—C5—C10—C9 | −178.4 (3) |
| C10—C5—C6—C7 | −1.2 (4) | C6—C5—C10—C11 | −178.8 (3) |
| C5—C6—C7—C8 | −0.1 (4) | N1—C5—C10—C11 | 1.5 (4) |
| C5—C6—C7—N2 | −178.3 (2) | C13—O4—C12—O5 | 1.0 (4) |
| O3—N2—C7—C6 | −75.9 (3) | C13—O4—C12—C8 | 179.9 (3) |
| O2—N2—C7—C6 | 101.7 (3) | C7—C8—C12—O5 | −13.9 (4) |
| O3—N2—C7—C8 | 105.9 (3) | C9—C8—C12—O5 | 165.5 (3) |
| O2—N2—C7—C8 | −76.5 (3) | C7—C8—C12—O4 | 167.1 (3) |
| C6—C7—C8—C9 | 1.2 (4) | C9—C8—C12—O4 | −13.5 (4) |
| N2—C7—C8—C9 | 179.3 (3) |
| H··· | ||||
| C6—H6A···O1 | 0.93 | 2.20 | 2.809 (3) | 122 |
| C9—H9A···O4 | 0.93 | 2.41 | 2.734 (3) | 100 |
| C13—H13A···O1i | 0.96 | 2.33 | 3.284 (4) | 174 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C6—H6 | 0.93 | 2.20 | 2.809 (3) | 122 |
| C9—H9 | 0.93 | 2.41 | 2.734 (3) | 100 |
| C13—H13 | 0.96 | 2.33 | 3.284 (4) | 174 |
Symmetry code: (i) .