Literature DB >> 21202123

(E)-2-(2-Fluoro-benzyl-idene)butanoic acid.

Muhammad Niaz, M Nawaz Tahir, Saqib Ali, Islam Ullah Khan.   

Abstract

In the crystal structure of the title compound, C(11)H(11)FO(2), the methine CH forms an intra-molecular hydrogen bond with the carboxyl- O atom. The mol-ecules form dimers through hydrogen bonding between carboxyl- groups. These dimers are linked to each other by C-H⋯O contacts between the benzene and carbonyl groups of adjoining mol-ecules. In addition, there are weak inter-molecular C-H⋯F contacts.

Entities:  

Year:  2008        PMID: 21202123      PMCID: PMC2960906          DOI: 10.1107/S1600536808007149

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Burns & Hagaman (1993 ▶); Burt (2004 ▶); Forgó et al. (2005 ▶); Hertog et al. (1995 ▶); Muhammad et al. (2007 ▶). For details of the Cambridge Structural Database, see: Allen (2002 ▶).

Experimental

Crystal data

C11H11FO2 M = 194.20 Monoclinic, a = 4.1895 (4) Å b = 17.4362 (19) Å c = 13.8134 (15) Å β = 96.719 (3)° V = 1002.12 (18) Å3 Z = 4 Mo Kα radiation radiation μ = 0.10 mm−1 T = 296 (2) K 0.25 × 0.18 × 0.12 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.935, T max = 0.958 8632 measured reflections 2981 independent reflections 1704 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.164 S = 1.04 2981 reflections 131 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.41 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2007 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2003 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808007149/bv2091sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808007149/bv2091Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H11F1O2F000 = 408
Mr = 194.20Dx = 1.287 Mg m3
Monoclinic, P21/cMo Kα radiation radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2981 reflections
a = 4.1895 (4) Åθ = 2.3–30.6º
b = 17.4362 (19) ŵ = 0.10 mm1
c = 13.8134 (15) ÅT = 296 (2) K
β = 96.719 (3)ºPrismatic, colourless
V = 1002.12 (18) Å30.25 × 0.18 × 0.12 mm
Z = 4
Bruker KappaAPEXII CCD diffractometer2981 independent reflections
Radiation source: fine-focus sealed tube1704 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.026
Detector resolution: 7.2 pixels mm-1θmax = 30.6º
T = 296(2) Kθmin = 2.3º
ω scansh = −5→6
Absorption correction: multi-scan(SADABS; Bruker, 2005)k = −24→23
Tmin = 0.935, Tmax = 0.958l = −19→19
8632 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.050H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.164  w = 1/[σ2(Fo2) + (0.0731P)2 + 0.1527P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
2981 reflectionsΔρmax = 0.41 e Å3
131 parametersΔρmin = −0.21 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F10.5705 (5)0.28288 (7)0.22076 (10)0.1113 (6)
O11.0669 (3)0.08331 (7)0.07503 (9)0.0575 (4)
H11.104 (5)0.0617 (11)0.0126 (15)0.069*
O20.8191 (3)−0.02692 (7)0.09434 (9)0.0609 (4)
C10.8986 (4)0.03770 (8)0.12367 (11)0.0406 (4)
C20.8045 (3)0.06721 (8)0.21699 (11)0.0394 (4)
C30.8530 (4)0.14131 (9)0.23791 (12)0.0443 (4)
H30.95550.16990.19380.053*
C40.7616 (4)0.18258 (9)0.32326 (11)0.0449 (4)
C50.6226 (5)0.25413 (10)0.31195 (13)0.0593 (5)
C60.5260 (6)0.29671 (11)0.38672 (16)0.0705 (6)
H60.42860.34430.37490.085*
C70.5763 (6)0.26755 (11)0.47922 (15)0.0659 (6)
H70.51200.29530.53110.079*
C80.7214 (5)0.19750 (12)0.49543 (14)0.0691 (6)
H80.75860.17810.55850.083*
C90.8126 (5)0.15554 (11)0.41831 (13)0.0601 (5)
H90.91050.10810.43040.072*
C100.6348 (4)0.01081 (9)0.27580 (12)0.0458 (4)
H10A0.4779−0.01700.23190.055*
H10B0.51850.03920.32090.055*
C110.8524 (5)−0.04706 (11)0.33354 (14)0.0614 (5)
H11A0.7248−0.08080.36820.092*
H11B1.0041−0.02050.37910.092*
H11C0.9657−0.07640.28970.092*
U11U22U33U12U13U23
F10.2170 (19)0.0646 (8)0.0569 (8)0.0505 (10)0.0350 (9)0.0161 (6)
O10.0854 (9)0.0450 (7)0.0468 (7)−0.0124 (6)0.0275 (6)−0.0072 (5)
O20.0912 (10)0.0434 (7)0.0528 (7)−0.0149 (6)0.0288 (7)−0.0118 (5)
C10.0485 (8)0.0360 (8)0.0382 (8)0.0015 (6)0.0091 (7)0.0007 (6)
C20.0426 (8)0.0401 (8)0.0357 (7)0.0046 (6)0.0061 (6)0.0003 (6)
C30.0549 (9)0.0404 (8)0.0382 (8)0.0029 (6)0.0085 (7)−0.0005 (6)
C40.0575 (10)0.0386 (8)0.0393 (8)0.0012 (7)0.0088 (7)−0.0041 (6)
C50.0947 (14)0.0413 (9)0.0438 (10)0.0086 (9)0.0156 (9)0.0029 (7)
C60.1047 (17)0.0438 (10)0.0653 (13)0.0165 (10)0.0194 (12)−0.0084 (9)
C70.0898 (15)0.0588 (12)0.0521 (11)0.0015 (10)0.0203 (10)−0.0183 (9)
C80.0999 (16)0.0685 (13)0.0391 (9)0.0122 (11)0.0095 (10)−0.0042 (9)
C90.0866 (14)0.0525 (10)0.0406 (9)0.0170 (9)0.0047 (9)−0.0027 (8)
C100.0478 (9)0.0460 (9)0.0456 (9)−0.0026 (7)0.0136 (7)−0.0018 (7)
C110.0694 (12)0.0513 (10)0.0654 (12)−0.0014 (8)0.0163 (10)0.0179 (9)
F1—C51.350 (2)C6—H60.9300
O1—C11.3006 (18)C7—C81.371 (3)
O1—H10.97 (2)C7—H70.9300
O2—C11.2301 (18)C8—C91.383 (2)
C1—C21.483 (2)C8—H80.9300
C2—C31.334 (2)C9—H90.9300
C2—C101.506 (2)C10—C111.521 (2)
C3—C41.470 (2)C10—H10A0.9700
C3—H30.9300C10—H10B0.9700
C4—C51.378 (2)C11—H11A0.9600
C4—C91.388 (2)C11—H11B0.9600
C5—C61.371 (3)C11—H11C0.9600
C6—C71.368 (3)
C1—O1—H1112.0 (12)C6—C7—H7120.0
O2—C1—O1122.15 (14)C8—C7—H7120.0
O2—C1—C2120.97 (14)C7—C8—C9120.19 (18)
O1—C1—C2116.88 (13)C7—C8—H8119.9
C3—C2—C1118.35 (14)C9—C8—H8119.9
C3—C2—C10125.80 (14)C8—C9—C4121.56 (17)
C1—C2—C10115.63 (13)C8—C9—H9119.2
C2—C3—C4126.91 (15)C4—C9—H9119.2
C2—C3—H3116.5C2—C10—C11115.09 (14)
C4—C3—H3116.5C2—C10—H10A108.5
C5—C4—C9115.53 (15)C11—C10—H10A108.5
C5—C4—C3119.92 (15)C2—C10—H10B108.5
C9—C4—C3124.53 (14)C11—C10—H10B108.5
F1—C5—C6118.18 (17)H10A—C10—H10B107.5
F1—C5—C4117.52 (16)C10—C11—H11A109.5
C6—C5—C4124.27 (18)C10—C11—H11B109.5
C7—C6—C5118.38 (18)H11A—C11—H11B109.5
C7—C6—H6120.8C10—C11—H11C109.5
C5—C6—H6120.8H11A—C11—H11C109.5
C6—C7—C8120.03 (18)H11B—C11—H11C109.5
O2—C1—C2—C3−169.70 (16)C3—C4—C5—C6179.3 (2)
O1—C1—C2—C310.1 (2)F1—C5—C6—C7179.6 (2)
O2—C1—C2—C105.2 (2)C4—C5—C6—C71.5 (4)
O1—C1—C2—C10−174.93 (14)C5—C6—C7—C80.3 (4)
C1—C2—C3—C4176.46 (15)C6—C7—C8—C9−1.0 (4)
C10—C2—C3—C42.1 (3)C7—C8—C9—C40.1 (3)
C2—C3—C4—C5−136.30 (19)C5—C4—C9—C81.5 (3)
C2—C3—C4—C945.5 (3)C3—C4—C9—C8179.80 (19)
C9—C4—C5—F1179.57 (19)C3—C2—C10—C11−106.93 (19)
C3—C4—C5—F11.2 (3)C1—C2—C10—C1178.57 (19)
C9—C4—C5—C6−2.4 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···O2i0.97 (2)1.66 (2)2.6325 (18)177.7 (12)
C3—H3···O10.932.322.713 (2)105
C6—H6···O2ii0.932.533.421 (2)160
C8—H8···F1iii0.932.553.266 (2)134 (1)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O2i0.97 (2)1.66 (2)2.6325 (18)177.7 (12)
C3—H3⋯O10.932.322.713 (2)105
C6—H6⋯O2ii0.932.533.421 (2)160
C8—H8⋯F1iii0.932.553.266 (2)134 (1)

Symmetry codes: (i) ; (ii) ; (iii) .

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