| Literature DB >> 21202075 |
Abstract
The asymmetric unit of the title compound, C(2)H(9)N(5) (2+)·2Cl(-), is composed of one diprotonated biguanidinium cation and two chloride anions. The diprotonated cation consists of two planar halves twisted by 36.42 (6)°. The ions are associated in the crystal structure by extensive hydrogen bonding into a three-dimensional network; the diprotonated biguanidinium cation is hydrogen bonded to the chloride anions.Entities:
Year: 2008 PMID: 21202075 PMCID: PMC2960918 DOI: 10.1107/S1600536808006144
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C2H9N52+·2Cl– | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 80724 reflections |
| θ = 3.2–32.0º | |
| µ = 0.83 mm−1 | |
| β = 98.6878 (12)º | Plate, colourless |
| 0.20 × 0.20 × 0.15 mm | |
| Oxford Diffraction Xcalibur S CCD diffractometer | 2456 independent reflections |
| Radiation source: Enhance (Mo) X-ray source | 2349 reflections with |
| Monochromator: graphite | |
| Detector resolution: 16.0696 pixels mm-1 | θmax = 32.0º |
| θmin = 3.2º | |
| ω and φ scans | |
| Absorption correction: multi-scan(CrysAlis RED; Oxford Diffraction, 2006) | |
| 80724 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | All H-atom parameters refined |
| | |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.14 e Å−3 | |
| 2456 reflections | Δρmin = −0.14 e Å−3 |
| 119 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.110 (6) |
| Secondary atom site location: difference Fourier map |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.86502 (5) | −0.053995 (15) | 0.27026 (4) | 0.03288 (9) | |
| Cl2 | 0.62775 (5) | 0.315420 (18) | 0.37349 (5) | 0.03605 (9) | |
| N1 | 0.35152 (13) | 0.16618 (5) | 0.32041 (15) | 0.02556 (17) | |
| H1 | 0.430 (3) | 0.2034 (10) | 0.356 (3) | 0.039 (4)* | |
| N2 | 0.00539 (15) | 0.12772 (6) | 0.20409 (16) | 0.02955 (19) | |
| H21 | 0.025 (3) | 0.0812 (11) | 0.243 (3) | 0.038 (4)* | |
| H22 | −0.109 (3) | 0.1408 (11) | 0.130 (3) | 0.048 (5)* | |
| N3 | 0.09938 (18) | 0.25798 (6) | 0.21118 (17) | 0.0335 (2) | |
| H31 | −0.025 (3) | 0.2708 (11) | 0.195 (3) | 0.046 (5)* | |
| H32 | 0.193 (3) | 0.2941 (11) | 0.232 (3) | 0.044 (5)* | |
| N4 | 0.38953 (17) | 0.03968 (6) | 0.18533 (15) | 0.0304 (2) | |
| H41 | 0.461 (3) | −0.0045 (12) | 0.196 (3) | 0.050 (5)* | |
| H42 | 0.308 (3) | 0.0513 (11) | 0.078 (3) | 0.047 (5)* | |
| N5 | 0.62338 (15) | 0.08686 (7) | 0.45410 (16) | 0.0324 (2) | |
| H51 | 0.646 (3) | 0.1178 (11) | 0.556 (3) | 0.044 (5)* | |
| H52 | 0.711 (3) | 0.0485 (11) | 0.440 (3) | 0.051 (5)* | |
| C1 | 0.14797 (15) | 0.18273 (5) | 0.24248 (14) | 0.02118 (17) | |
| C2 | 0.45468 (15) | 0.09538 (6) | 0.31785 (15) | 0.02354 (18) |
| Cl1 | 0.04007 (15) | 0.02213 (13) | 0.03406 (15) | 0.00402 (9) | −0.00208 (10) | −0.00296 (9) |
| Cl2 | 0.03243 (14) | 0.03940 (16) | 0.03375 (15) | −0.01269 (10) | −0.00333 (10) | 0.00083 (10) |
| N1 | 0.0205 (4) | 0.0213 (4) | 0.0344 (4) | −0.0012 (3) | 0.0024 (3) | −0.0021 (3) |
| N2 | 0.0220 (4) | 0.0256 (4) | 0.0390 (5) | −0.0017 (3) | −0.0020 (3) | 0.0058 (4) |
| N3 | 0.0368 (5) | 0.0215 (4) | 0.0420 (6) | 0.0052 (4) | 0.0055 (4) | 0.0047 (4) |
| N4 | 0.0379 (5) | 0.0269 (4) | 0.0257 (4) | 0.0089 (4) | 0.0022 (4) | −0.0017 (3) |
| N5 | 0.0253 (4) | 0.0399 (5) | 0.0312 (5) | 0.0067 (4) | 0.0010 (3) | 0.0010 (4) |
| C1 | 0.0229 (4) | 0.0203 (4) | 0.0208 (4) | 0.0012 (3) | 0.0047 (3) | 0.0022 (3) |
| C2 | 0.0218 (4) | 0.0261 (4) | 0.0238 (4) | 0.0022 (3) | 0.0068 (3) | 0.0031 (3) |
| N1—C1 | 1.3634 (13) | N3—H32 | 0.857 (19) |
| N1—C2 | 1.3719 (13) | N4—C2 | 1.3156 (14) |
| N1—H1 | 0.819 (18) | N4—H41 | 0.88 (2) |
| N2—C1 | 1.3056 (13) | N4—H42 | 0.846 (19) |
| N2—H21 | 0.833 (18) | N5—C2 | 1.3131 (14) |
| N2—H22 | 0.852 (19) | N5—H51 | 0.853 (19) |
| N3—C1 | 1.3211 (13) | N5—H52 | 0.874 (19) |
| N3—H31 | 0.823 (19) | ||
| C1—N1—C2 | 127.89 (9) | H41—N4—H42 | 121.2 (17) |
| C1—N1—H1 | 117.6 (12) | C2—N5—H51 | 120.4 (12) |
| C2—N1—H1 | 113.6 (12) | C2—N5—H52 | 119.2 (13) |
| C1—N2—H21 | 122.9 (12) | H51—N5—H52 | 120.4 (17) |
| C1—N2—H22 | 116.6 (13) | N2—C1—N3 | 120.97 (10) |
| H21—N2—H22 | 120.4 (17) | N2—C1—N1 | 122.31 (9) |
| C1—N3—H31 | 118.5 (13) | N3—C1—N1 | 116.70 (9) |
| C1—N3—H32 | 121.3 (12) | N5—C2—N4 | 122.04 (10) |
| H31—N3—H32 | 119.0 (17) | N5—C2—N1 | 116.03 (10) |
| C2—N4—H41 | 116.7 (12) | N4—C2—N1 | 121.93 (9) |
| C2—N4—H42 | 119.7 (12) | ||
| C2—N1—C1—N2 | 19.96 (17) | C1—N1—C2—N5 | −159.12 (10) |
| C2—N1—C1—N3 | −161.49 (10) | C1—N1—C2—N4 | 21.55 (17) |
| H··· | ||||
| N1—H1···Cl2 | 0.819 (18) | 2.279 (18) | 3.0796 (9) | 166.0 (16) |
| N2—H21···Cl1i | 0.833 (18) | 2.530 (18) | 3.2557 (10) | 146.4 (15) |
| N2—H22···Cl2ii | 0.852 (19) | 2.34 (2) | 3.1714 (10) | 167.1 (17) |
| N3—H31···Cl2i | 0.823 (19) | 2.787 (19) | 3.5098 (12) | 147.8 (16) |
| N3—H32···Cl1iii | 0.857 (19) | 2.599 (19) | 3.1933 (10) | 127.4 (15) |
| N3—H32···Cl2 | 0.857 (19) | 2.835 (19) | 3.5454 (12) | 141.3 (15) |
| N4—H41···Cl1 | 0.88 (2) | 2.703 (19) | 3.4178 (11) | 139.4 (16) |
| N4—H42···Cl1iv | 0.846 (19) | 2.412 (19) | 3.2295 (10) | 162.8 (17) |
| N5—H51···Cl2v | 0.853 (19) | 2.413 (19) | 3.2404 (12) | 163.7 (16) |
| N5—H52···Cl1 | 0.874 (19) | 2.369 (19) | 3.1905 (11) | 156.7 (17) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯Cl2 | 0.819 (18) | 2.279 (18) | 3.0796 (9) | 166.0 (16) |
| N2—H21⋯Cl1i | 0.833 (18) | 2.530 (18) | 3.2557 (10) | 146.4 (15) |
| N2—H22⋯Cl2ii | 0.852 (19) | 2.34 (2) | 3.1714 (10) | 167.1 (17) |
| N3—H31⋯Cl2i | 0.823 (19) | 2.787 (19) | 3.5098 (12) | 147.8 (16) |
| N3—H32⋯Cl1iii | 0.857 (19) | 2.599 (19) | 3.1933 (10) | 127.4 (15) |
| N3—H32⋯Cl2 | 0.857 (19) | 2.835 (19) | 3.5454 (12) | 141.3 (15) |
| N4—H41⋯Cl1 | 0.88 (2) | 2.703 (19) | 3.4178 (11) | 139.4 (16) |
| N4—H42⋯Cl1iv | 0.846 (19) | 2.412 (19) | 3.2295 (10) | 162.8 (17) |
| N5—H51⋯Cl2v | 0.853 (19) | 2.413 (19) | 3.2404 (12) | 163.7 (16) |
| N5—H52⋯Cl1 | 0.874 (19) | 2.369 (19) | 3.1905 (11) | 156.7 (17) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .