Literature DB >> 21202050

(E)-1-(Pyridin-2-yl)ethanone O-acryloyloxime.

Mariusz Mojzych, Zbigniew Karczmarzyk, Andrzej Fruziński.   

Abstract

The title compound, C(10)H(10)N(2)O(2), was synthesized by the reaction of the oxime of 2-acetyl-pyridine and 3-bromo-propanoyl chloride in the presence of triethyl-amine. The mol-ecule adopts a nearly planar chain-extended conformation with the oxime group in a trans and the acryloyl group in an s-cis conformation. This conformation is stabilized by an intra-molecular C-H⋯N hydrogen bond. The screw-related mol-ecules are linked into C(9) chains by C-H⋯O hydrogen bonds.

Entities:  

Year:  2008        PMID: 21202050      PMCID: PMC2961001          DOI: 10.1107/S1600536808005436

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Robertson, (1995 ▶). For the biological activity of oximes, see: Van Helden et al. (1996 ▶). For related structures, see: Mojzych et al. (2007 ▶). For the graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C10H10N2O2 M = 190.20 Monoclinic, a = 7.0240 (5) Å b = 18.4054 (14) Å c = 7.8642 (6) Å β = 114.043 (1)° V = 928.47 (12) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 100 (2) K 0.75 × 0.13 × 0.07 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2002 ▶) T min = 0.924, T max = 0.993 15216 measured reflections 2209 independent reflections 1951 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.098 S = 1.02 2209 reflections 167 parameters All H-atom parameters refined Δρmax = 0.40 e Å−3 Δρmin = −0.18 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008 ▶), PLATON (Spek, 2003 ▶) and WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808005436/ci2565sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808005436/ci2565Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H10N2O2F000 = 400
Mr = 190.20Dx = 1.361 Mg m3
Monoclinic, P21/nMelting point: 338 K
Hall symbol: -P 2ynMo Kα radiation λ = 0.71073 Å
a = 7.0240 (5) ÅCell parameters from 166 reflections
b = 18.4054 (14) Åθ = 3.8–28.0º
c = 7.8642 (6) ŵ = 0.10 mm1
β = 114.043 (1)ºT = 100 (2) K
V = 928.47 (12) Å3Prism, colourless
Z = 40.75 × 0.13 × 0.07 mm
Bruker SMART APEXII CCD diffractometer1951 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.035
T = 100(2) Kθmax = 28.4º
ω scansθmin = 2.2º
Absorption correction: multi-scan(SADABS; Sheldrick, 2002)h = −9→9
Tmin = 0.924, Tmax = 0.993k = −24→24
15216 measured reflectionsl = −10→10
2209 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033All H-atom parameters refined
wR(F2) = 0.098  w = 1/[σ2(Fo2) + (0.0531P)2 + 0.3208P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.001
2209 reflectionsΔρmax = 0.40 e Å3
167 parametersΔρmin = −0.18 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.29133 (11)−0.01660 (4)0.63817 (9)0.01600 (18)
O20.12879 (12)−0.12207 (4)0.50393 (10)0.02091 (19)
N10.27586 (13)0.17974 (5)0.26737 (12)0.0168 (2)
N20.23265 (12)0.01032 (5)0.45236 (11)0.0149 (2)
C10.22032 (15)0.21070 (6)0.09936 (15)0.0189 (2)
C20.14439 (15)0.17215 (6)−0.06672 (15)0.0189 (2)
C30.13150 (15)0.09699 (6)−0.06045 (14)0.0176 (2)
C40.19186 (15)0.06379 (6)0.11195 (14)0.0157 (2)
C50.25793 (14)0.10712 (5)0.27155 (14)0.0139 (2)
C60.30844 (14)0.07431 (5)0.45895 (13)0.0137 (2)
C70.22368 (15)−0.08629 (5)0.63995 (14)0.0148 (2)
C80.28945 (16)−0.10972 (6)0.83633 (15)0.0184 (2)
C90.25144 (17)−0.17670 (6)0.87484 (16)0.0212 (2)
C100.43601 (17)0.11625 (6)0.63073 (14)0.0179 (2)
H10.234 (2)0.2626 (8)0.0980 (19)0.023 (3)*
H20.106 (2)0.1958 (8)−0.180 (2)0.026 (3)*
H30.081 (2)0.0693 (8)−0.173 (2)0.027 (3)*
H40.185 (2)0.0111 (7)0.1226 (18)0.021 (3)*
H80.363 (2)−0.0726 (8)0.931 (2)0.030 (4)*
H9A0.293 (2)−0.1938 (7)1.002 (2)0.025 (3)*
H9B0.180 (2)−0.2100 (7)0.776 (2)0.025 (3)*
H10A0.389 (2)0.1079 (8)0.726 (2)0.038 (4)*
H10B0.429 (2)0.1661 (9)0.605 (2)0.039 (4)*
H10C0.581 (3)0.1023 (8)0.673 (2)0.039 (4)*
U11U22U33U12U13U23
O10.0177 (4)0.0178 (4)0.0120 (3)−0.0008 (3)0.0056 (3)0.0015 (3)
O20.0281 (4)0.0172 (4)0.0168 (4)−0.0010 (3)0.0085 (3)−0.0012 (3)
N10.0150 (4)0.0154 (4)0.0200 (4)0.0006 (3)0.0072 (3)0.0004 (3)
N20.0158 (4)0.0173 (4)0.0119 (4)0.0022 (3)0.0059 (3)0.0022 (3)
C10.0168 (5)0.0153 (5)0.0244 (5)0.0010 (4)0.0081 (4)0.0033 (4)
C20.0154 (5)0.0227 (5)0.0181 (5)0.0023 (4)0.0064 (4)0.0067 (4)
C30.0152 (5)0.0220 (5)0.0154 (5)−0.0014 (4)0.0060 (4)−0.0011 (4)
C40.0147 (4)0.0154 (5)0.0176 (5)0.0000 (3)0.0072 (4)0.0004 (4)
C50.0104 (4)0.0162 (5)0.0155 (5)0.0013 (3)0.0058 (3)0.0005 (4)
C60.0115 (4)0.0160 (5)0.0149 (5)0.0024 (3)0.0067 (3)−0.0007 (4)
C70.0131 (4)0.0163 (5)0.0169 (5)0.0031 (3)0.0080 (4)0.0013 (4)
C80.0167 (5)0.0237 (5)0.0156 (5)0.0008 (4)0.0073 (4)0.0013 (4)
C90.0212 (5)0.0241 (6)0.0208 (5)0.0039 (4)0.0110 (4)0.0051 (4)
C100.0205 (5)0.0181 (5)0.0154 (5)−0.0027 (4)0.0077 (4)−0.0025 (4)
O1—C71.3698 (12)C4—C51.3971 (14)
O1—N21.4352 (10)C4—H40.976 (13)
O2—C71.2005 (13)C5—C61.4954 (13)
N1—C11.3426 (14)C6—C101.4957 (13)
N1—C51.3442 (13)C7—C81.4843 (14)
N2—C61.2849 (13)C8—C91.3224 (15)
C1—C21.3879 (15)C8—H80.989 (15)
C1—H10.962 (14)C9—H9A0.972 (15)
C2—C31.3884 (15)C9—H9B0.954 (14)
C2—H20.929 (15)C10—H10A0.947 (17)
C3—C41.3868 (14)C10—H10B0.937 (16)
C3—H30.954 (15)C10—H10C0.969 (16)
C7—O1—N2112.13 (7)N2—C6—C5113.73 (8)
C1—N1—C5116.97 (9)N2—C6—C10126.54 (9)
C6—N2—O1109.45 (8)C5—C6—C10119.74 (8)
N1—C1—C2123.73 (10)O2—C7—O1125.00 (9)
N1—C1—H1116.3 (8)O2—C7—C8126.30 (9)
C2—C1—H1120.0 (8)O1—C7—C8108.69 (8)
C3—C2—C1118.79 (9)C9—C8—C7120.19 (10)
C3—C2—H2120.2 (9)C9—C8—H8124.2 (9)
C1—C2—H2121.0 (9)C7—C8—H8115.5 (9)
C4—C3—C2118.38 (9)C8—C9—H9A122.2 (8)
C4—C3—H3121.3 (8)C8—C9—H9B120.1 (8)
C2—C3—H3120.3 (8)H9A—C9—H9B117.7 (11)
C3—C4—C5118.96 (9)C6—C10—H10A111.0 (10)
C3—C4—H4121.0 (8)C6—C10—H10B110.3 (10)
C5—C4—H4120.0 (8)H10A—C10—H10B109.1 (13)
N1—C5—C4123.07 (9)C6—C10—H10C109.4 (9)
N1—C5—C6116.01 (8)H10A—C10—H10C109.9 (13)
C4—C5—C6120.90 (9)H10B—C10—H10C107.0 (13)
C7—O1—N2—C6−176.92 (7)O1—N2—C6—C10−0.77 (13)
C5—N1—C1—C20.84 (14)N1—C5—C6—N2160.49 (8)
N1—C1—C2—C3−2.47 (15)C4—C5—C6—N2−18.13 (12)
C1—C2—C3—C41.12 (14)N1—C5—C6—C10−19.37 (12)
C2—C3—C4—C51.61 (14)C4—C5—C6—C10162.02 (9)
C1—N1—C5—C42.13 (14)N2—O1—C7—O20.98 (13)
C1—N1—C5—C6−176.46 (8)N2—O1—C7—C8−179.69 (7)
C3—C4—C5—N1−3.38 (14)O2—C7—C8—C92.73 (16)
C3—C4—C5—C6175.14 (8)O1—C7—C8—C9−176.58 (9)
O1—N2—C6—C5179.39 (7)
D—H···AD—HH···AD···AD—H···A
C10—H10B···N10.94 (2)2.438 (14)2.8596 (14)107 (1)
C1—H1···O2i0.96 (2)2.588 (15)3.4581 (14)150 (1)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C10—H10B⋯N10.94 (2)2.438 (14)2.8596 (14)107 (1)
C1—H1⋯O2i0.96 (2)2.588 (15)3.4581 (14)150 (1)

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Pharmacological effects of oximes: how relevant are they?

Authors:  H P van Helden; R W Busker; B P Melchers; P L Bruijnzeel
Journal:  Arch Toxicol       Date:  1996       Impact factor: 5.153

  2 in total

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