Literature DB >> 21202043

[(2S)-2-(3,5-Dichloro-2-oxidobenzyl-ideneamino)-3-(4-hydroxy-phen-yl)propionato-κO,N,O'](dimethyl-formamide-κO)copper(II).

Ming-Xiong Tan, Zhen-Feng Chen, Zhou Neng, Hong Liang.   

Abstract

In the title complex, [Cu(C(16)H(11)Cl(2)NO(4))(C(3)H(7)NO)] , the Cu(II) atom is coordinated by two O atoms and one N atom from the tridentate ligand L(2-) {LH(2) = (2S)-[2-(3,5-dichloro-2-hydroxy-benzyl-idene)-imino]-3-(4-hydroxy-phenyl)propionic acid} and one O atom from a dimethyl-formamide mol-ecule, resulting in a slightly distorted square-planar geometry. The structure forms a one-dimensional chain through weak coordination bonds [Cu⋯O 3.080 (1), Cu⋯Cl 3.269 (1) Å] and a three-dimensional network through O-H⋯O and C-H⋯O hydrogen bonds.

Entities:  

Year:  2008        PMID: 21202043      PMCID: PMC2960937          DOI: 10.1107/S1600536808007939

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Li et al. (2008 ▶); Zhang, Li et al. (2007 ▶); Zhang, Feng et al. (2007a ▶,b ▶). For related literature, see: Xia et al. (2007 ▶); Liu et al. (2007 ▶); Cohen et al. (1964 ▶); Desiraju (1989 ▶); Zordan et al. (2005 ▶).

Experimental

Crystal data

[Cu(C16H11Cl2NO4)(C3H7NO)] M = 488.79 Orthorhombic, a = 5.8646 (16) Å b = 13.220 (2) Å c = 26.850 (3) Å V = 2081.7 (7) Å3 Z = 4 Mo Kα radiation μ = 1.34 mm−1 T = 298 (2) K 0.48 × 0.20 × 0.18 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.532, T max = 0.786 10650 measured reflections 3638 independent reflections 2915 reflections with I > 2σ(I) R int = 0.098

Refinement

R[F 2 > 2σ(F 2)] = 0.061 wR(F 2) = 0.148 S = 1.04 3638 reflections 262 parameters H-atom parameters constrained Δρmax = 0.50 e Å−3 Δρmin = −0.54 e Å−3 Absolute structure: Flack (1983 ▶), with 1505 Friedel pairs Flack parameter: 0.04 (3) Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808007939/rt2016sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808007939/rt2016Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C16H11Cl2NO4)(C3H7NO)]F000 = 996
Mr = 488.79Dx = 1.560 Mg m3
Orthorhombic, P212121Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 4089 reflections
a = 5.8646 (16) Åθ = 2.3–23.8º
b = 13.220 (2) ŵ = 1.34 mm1
c = 26.850 (3) ÅT = 298 (2) K
V = 2081.7 (7) Å3Prism, blue
Z = 40.48 × 0.20 × 0.18 mm
Bruker SMART CCD area-detector diffractometer3638 independent reflections
Radiation source: fine-focus sealed tube2915 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.098
T = 298(2) Kθmax = 25.0º
φ and ω scansθmin = 1.5º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −6→6
Tmin = 0.532, Tmax = 0.786k = −15→12
10650 measured reflectionsl = −31→31
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.061  w = 1/[σ2(Fo2) + (0.0751P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.148(Δ/σ)max < 0.001
S = 1.04Δρmax = 0.50 e Å3
3638 reflectionsΔρmin = −0.54 e Å3
262 parametersExtinction correction: none
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), with 1505 Friedel pairs
Secondary atom site location: difference Fourier mapFlack parameter: 0.04 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.87095 (14)0.01109 (5)0.92554 (2)0.0398 (2)
Cl11.5356 (3)0.15751 (14)0.99080 (6)0.0542 (5)
Cl21.5314 (5)0.4447 (2)0.84884 (10)0.1123 (10)
N10.7954 (8)0.0937 (4)0.86843 (16)0.0341 (12)
N21.2035 (10)−0.1364 (5)1.03525 (19)0.0502 (15)
O10.5867 (8)−0.0565 (3)0.91109 (13)0.0447 (11)
O20.2837 (8)−0.0471 (4)0.86065 (16)0.0507 (12)
O30.9847 (9)0.2916 (4)0.64815 (17)0.0663 (15)
H30.88570.33350.64200.099*
O41.1115 (8)0.0946 (3)0.94609 (13)0.0426 (10)
O50.9417 (9)−0.0841 (4)0.97899 (16)0.0566 (14)
C10.4783 (12)−0.0227 (4)0.8738 (2)0.0371 (14)
C20.5969 (10)0.0579 (4)0.84153 (18)0.0335 (13)
H20.49210.11450.83570.040*
C30.6629 (11)0.0092 (4)0.79128 (18)0.0413 (15)
H3A0.7794−0.04160.79710.050*
H3B0.5305−0.02490.77760.050*
C40.7505 (11)0.0844 (5)0.7537 (2)0.0390 (15)
C50.6177 (12)0.1646 (5)0.7384 (2)0.0470 (16)
H50.47400.17260.75250.056*
C60.6887 (12)0.2333 (5)0.7032 (2)0.0478 (18)
H60.59190.28500.69300.057*
C70.9055 (11)0.2249 (5)0.6832 (2)0.0436 (16)
C81.0373 (13)0.1453 (5)0.6970 (2)0.0552 (18)
H81.17930.13690.68220.066*
C90.9657 (12)0.0762 (5)0.7326 (2)0.0477 (17)
H91.06250.02410.74240.057*
C100.8988 (10)0.1759 (4)0.85633 (19)0.0335 (13)
H100.83730.21300.83010.040*
C111.1005 (11)0.2157 (4)0.87951 (19)0.0367 (14)
C121.1995 (9)0.1712 (4)0.9226 (2)0.0346 (13)
C131.4061 (11)0.2142 (5)0.93978 (19)0.0372 (14)
C141.5016 (12)0.2978 (5)0.9188 (2)0.0527 (18)
H141.63340.32590.93220.063*
C151.4005 (14)0.3402 (5)0.8774 (3)0.062 (2)
C161.2032 (12)0.3018 (5)0.8584 (3)0.0508 (18)
H161.13540.33290.83110.061*
C171.1375 (15)−0.0875 (5)0.9947 (3)0.0558 (18)
H171.2486−0.05310.97670.067*
C181.0416 (14)−0.1899 (7)1.0655 (3)0.073 (2)
H18A1.0066−0.15051.09450.110*
H18B1.1053−0.25371.07540.110*
H18C0.9048−0.20131.04670.110*
C191.4387 (14)−0.1337 (7)1.0521 (3)0.078 (3)
H19A1.5335−0.10671.02610.118*
H19B1.4881−0.20101.06010.118*
H19C1.4502−0.09171.08110.118*
U11U22U33U12U13U23
Cu10.0472 (4)0.0363 (4)0.0360 (3)−0.0017 (4)−0.0031 (3)0.0056 (3)
Cl10.0510 (10)0.0635 (11)0.0481 (8)0.0039 (9)−0.0144 (7)−0.0136 (8)
Cl20.117 (2)0.0863 (18)0.133 (2)−0.0606 (17)−0.0291 (18)0.0441 (15)
N10.037 (3)0.031 (3)0.034 (2)0.009 (2)0.001 (2)−0.002 (2)
N20.045 (3)0.056 (4)0.050 (3)0.007 (3)−0.001 (3)0.022 (3)
O10.056 (3)0.039 (2)0.039 (2)−0.010 (2)0.001 (2)0.0045 (17)
O20.043 (3)0.048 (3)0.060 (3)−0.008 (2)0.004 (2)−0.009 (2)
O30.070 (4)0.058 (3)0.071 (3)0.012 (3)0.034 (3)0.015 (3)
O40.047 (3)0.045 (2)0.0357 (19)0.005 (2)−0.003 (2)−0.0015 (18)
O50.060 (4)0.055 (3)0.055 (3)0.002 (3)−0.006 (2)0.024 (2)
C10.043 (4)0.027 (3)0.041 (3)0.003 (3)0.001 (3)−0.007 (3)
C20.024 (3)0.040 (3)0.037 (3)0.000 (3)−0.005 (3)−0.004 (2)
C30.049 (4)0.039 (3)0.036 (3)−0.003 (4)−0.003 (3)−0.005 (3)
C40.043 (4)0.040 (4)0.034 (3)0.005 (3)−0.007 (3)−0.003 (3)
C50.036 (3)0.067 (4)0.038 (3)0.007 (4)0.003 (3)0.005 (3)
C60.046 (4)0.050 (4)0.047 (4)0.015 (3)0.003 (3)0.007 (3)
C70.043 (4)0.051 (4)0.037 (3)0.004 (4)0.005 (3)0.001 (3)
C80.048 (4)0.062 (5)0.056 (4)0.010 (4)0.014 (3)0.007 (3)
C90.041 (4)0.046 (4)0.056 (4)0.009 (3)0.007 (3)−0.006 (3)
C100.032 (3)0.034 (3)0.034 (3)−0.001 (3)0.000 (3)0.001 (2)
C110.038 (4)0.035 (3)0.037 (3)0.001 (3)0.004 (3)−0.001 (2)
C120.027 (3)0.036 (3)0.041 (3)0.005 (3)0.006 (3)−0.017 (3)
C130.035 (4)0.045 (4)0.032 (3)0.003 (3)0.001 (3)−0.013 (2)
C140.045 (4)0.052 (4)0.061 (4)−0.010 (4)−0.005 (4)−0.015 (3)
C150.060 (5)0.052 (4)0.073 (5)−0.013 (4)−0.001 (4)0.009 (4)
C160.050 (4)0.038 (4)0.064 (4)−0.012 (3)−0.002 (4)0.014 (3)
C170.055 (5)0.048 (4)0.065 (4)0.009 (4)0.001 (4)0.021 (3)
C180.063 (5)0.093 (6)0.064 (5)0.001 (5)0.003 (4)0.038 (4)
C190.055 (5)0.092 (7)0.088 (5)0.003 (5)−0.017 (4)0.037 (5)
Cu1—O41.875 (5)C5—C61.374 (9)
Cu1—O11.931 (5)C5—H50.9300
Cu1—N11.934 (5)C6—C71.385 (9)
Cu1—O51.954 (4)C6—H60.9300
Cl1—C131.736 (6)C7—C81.357 (9)
Cl2—C151.756 (7)C8—C91.387 (9)
N1—C101.286 (7)C8—H80.9300
N1—C21.449 (7)C9—H90.9300
N2—C171.324 (8)C10—C111.437 (8)
N2—C181.435 (9)C10—H100.9300
N2—C191.452 (9)C11—C161.407 (8)
O1—C11.267 (7)C11—C121.423 (8)
O2—C11.238 (7)C12—C131.416 (8)
O3—C71.371 (7)C13—C141.361 (9)
O3—H30.8200C14—C151.379 (10)
O4—C121.299 (7)C14—H140.9300
O5—C171.224 (9)C15—C161.362 (10)
C1—C21.540 (8)C16—H160.9300
C2—C31.545 (7)C17—H170.9300
C2—H20.9800C18—H18A0.9600
C3—C41.508 (8)C18—H18B0.9600
C3—H3A0.9700C18—H18C0.9600
C3—H3B0.9700C19—H19A0.9600
C4—C51.378 (9)C19—H19B0.9600
C4—C91.387 (9)C19—H19C0.9600
O4—Cu1—O1169.0 (2)C7—C8—C9121.8 (7)
O4—Cu1—N194.2 (2)C7—C8—H8119.1
O1—Cu1—N184.5 (2)C9—C8—H8119.1
O4—Cu1—O590.2 (2)C4—C9—C8120.3 (7)
O1—Cu1—O591.9 (2)C4—C9—H9119.9
N1—Cu1—O5174.3 (2)C8—C9—H9119.9
C10—N1—C2121.9 (5)N1—C10—C11126.1 (5)
C10—N1—Cu1124.7 (4)N1—C10—H10117.0
C2—N1—Cu1113.3 (4)C11—C10—H10117.0
C17—N2—C18120.8 (6)C16—C11—C12119.2 (6)
C17—N2—C19121.4 (7)C16—C11—C10118.3 (5)
C18—N2—C19117.7 (6)C12—C11—C10122.5 (5)
C1—O1—Cu1115.4 (4)O4—C12—C13119.7 (5)
C7—O3—H3109.5O4—C12—C11123.7 (5)
C12—O4—Cu1128.0 (4)C13—C12—C11116.6 (6)
C17—O5—Cu1118.4 (5)C14—C13—C12122.9 (6)
O2—C1—O1126.6 (6)C14—C13—Cl1119.8 (5)
O2—C1—C2115.8 (5)C12—C13—Cl1117.2 (5)
O1—C1—C2117.6 (5)C13—C14—C15119.2 (7)
N1—C2—C1107.9 (4)C13—C14—H14120.4
N1—C2—C3111.7 (5)C15—C14—H14120.4
C1—C2—C3108.4 (5)C16—C15—C14121.0 (7)
N1—C2—H2109.6C16—C15—Cl2120.1 (6)
C1—C2—H2109.6C14—C15—Cl2118.9 (6)
C3—C2—H2109.6C15—C16—C11121.0 (7)
C4—C3—C2113.3 (5)C15—C16—H16119.5
C4—C3—H3A108.9C11—C16—H16119.5
C2—C3—H3A108.9O5—C17—N2125.2 (7)
C4—C3—H3B108.9O5—C17—H17117.4
C2—C3—H3B108.9N2—C17—H17117.4
H3A—C3—H3B107.7N2—C18—H18A109.5
C5—C4—C9117.0 (6)N2—C18—H18B109.5
C5—C4—C3121.0 (6)H18A—C18—H18B109.5
C9—C4—C3122.1 (6)N2—C18—H18C109.5
C6—C5—C4122.8 (7)H18A—C18—H18C109.5
C6—C5—H5118.6H18B—C18—H18C109.5
C4—C5—H5118.6N2—C19—H19A109.5
C5—C6—C7119.4 (6)N2—C19—H19B109.5
C5—C6—H6120.3H19A—C19—H19B109.5
C7—C6—H6120.3N2—C19—H19C109.5
C8—C7—O3119.5 (6)H19A—C19—H19C109.5
C8—C7—C6118.6 (6)H19B—C19—H19C109.5
O3—C7—C6121.7 (6)
O4—Cu1—N1—C10−0.5 (5)O3—C7—C8—C9179.5 (6)
O1—Cu1—N1—C10168.5 (5)C6—C7—C8—C9−3.9 (11)
O4—Cu1—N1—C2−176.4 (4)C5—C4—C9—C8−1.5 (10)
O1—Cu1—N1—C2−7.4 (3)C3—C4—C9—C8178.0 (6)
O4—Cu1—O1—C183.8 (9)C7—C8—C9—C42.9 (11)
N1—Cu1—O1—C10.1 (4)C2—N1—C10—C11−177.8 (5)
O5—Cu1—O1—C1−175.4 (4)Cu1—N1—C10—C116.6 (8)
O1—Cu1—O4—C12−90.9 (9)N1—C10—C11—C16174.1 (6)
N1—Cu1—O4—C12−8.1 (5)N1—C10—C11—C12−5.7 (9)
O5—Cu1—O4—C12168.2 (5)Cu1—O4—C12—C13−168.8 (4)
O4—Cu1—O5—C17−26.4 (6)Cu1—O4—C12—C1110.8 (8)
O1—Cu1—O5—C17164.4 (6)C16—C11—C12—O4176.7 (5)
Cu1—O1—C1—O2−172.3 (5)C10—C11—C12—O4−3.5 (8)
Cu1—O1—C1—C27.0 (6)C16—C11—C12—C13−3.7 (8)
C10—N1—C2—C1−164.2 (5)C10—C11—C12—C13176.1 (5)
Cu1—N1—C2—C111.9 (5)O4—C12—C13—C14−176.3 (5)
C10—N1—C2—C376.7 (7)C11—C12—C13—C144.1 (8)
Cu1—N1—C2—C3−107.2 (4)O4—C12—C13—Cl12.3 (7)
O2—C1—C2—N1166.9 (5)C11—C12—C13—Cl1−177.3 (4)
O1—C1—C2—N1−12.5 (7)C12—C13—C14—C15−3.4 (10)
O2—C1—C2—C3−71.9 (6)Cl1—C13—C14—C15178.1 (5)
O1—C1—C2—C3108.7 (5)C13—C14—C15—C162.2 (11)
N1—C2—C3—C4−69.3 (6)C13—C14—C15—Cl2−177.3 (5)
C1—C2—C3—C4171.9 (5)C14—C15—C16—C11−2.0 (11)
C2—C3—C4—C5−59.0 (7)Cl2—C15—C16—C11177.5 (6)
C2—C3—C4—C9121.5 (6)C12—C11—C16—C152.8 (10)
C9—C4—C5—C61.3 (10)C10—C11—C16—C15−177.0 (6)
C3—C4—C5—C6−178.2 (6)Cu1—O5—C17—N2169.3 (5)
C4—C5—C6—C7−2.4 (10)C18—N2—C17—O5−1.1 (12)
C5—C6—C7—C83.6 (10)C19—N2—C17—O5−178.0 (8)
C5—C6—C7—O3−179.8 (6)
D—H···AD—HH···AD···AD—H···A
O3—H3···O2i0.821.872.661 (7)163
C17—H17···O40.932.272.743 (8)111
C18—H18B···O1ii0.962.543.421 (10)150
Cu1—O41.875 (5)
Cu1—O11.931 (5)
Cu1—N11.934 (5)
Cu1—O51.954 (4)
O4—Cu1—O1169.0 (2)
O4—Cu1—N194.2 (2)
O1—Cu1—N184.5 (2)
O4—Cu1—O590.2 (2)
O1—Cu1—O591.9 (2)
N1—Cu1—O5174.3 (2)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O2i0.821.872.661 (7)163
C17—H17⋯O40.932.272.743 (8)111
C18—H18B⋯O1ii0.962.543.421 (10)150

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Supramolecular chemistry of halogens: complementary features of inorganic (M-X) and organic (C-X') halogens applied to M-X...X'-C halogen bond formation.

Authors:  Fiorenzo Zordan; Lee Brammer; Paul Sherwood
Journal:  J Am Chem Soc       Date:  2005-04-27       Impact factor: 15.419

3.  Bis(2,4-dibromo-6-formyl-phenolato-κO,O')copper(II).

Authors:  Guang Zhao Li; Shu Hua Zhang; Zheng Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-06
  3 in total

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