Literature DB >> 21202041

Dioxidobis(2-oxo-1,2-dihydropyridin-3-olato)-molybdenum(VI).

Manoj Trivedi, Daya Shankar Pandey, Nigam P Rath.   

Abstract

In the title compound, [Mo(C(5)H(4)NO(2))(2)O(2)], the Mo(VI) atom exhibits a distorted octa-hedral coordination geometry formed by two terminal oxo ligands and two monoanionic O,O-bidentate pyridinone ligands. The two terminal oxo ligands lie in a cis arrangement, the ketonic O atoms of the pyridinone ligands are coordinated trans to the oxo ligands and the deprotonated hydroxyl O atoms are located trans to each other. The crystal structure contains inter-molecular N-H⋯O hydrogen bonds, C-H⋯O contacts and face-to-face π-π stacking inter-actions with an inter-planar separation of 3.25 (1) Å.

Entities:  

Year:  2008        PMID: 21202041      PMCID: PMC2960932          DOI: 10.1107/S1600536808007782

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Veiros et al. (2006 ▶); Tucci et al. (1998 ▶); Collison et al. (1996 ▶); Hille (1996 ▶). For related structures, see: Brown et al. (2004 ▶); Hanna et al. (2000 ▶); Thompson et al. (1999 ▶); Zhang et al. (1992 ▶). For related literature, see: Braga et al. (1997 ▶); Grasselli (1999 ▶); Hozba et al. (1997 ▶); Ranganathan et al. (1998 ▶); Schrock (1998 ▶); Schultz et al. (1993 ▶).

Experimental

Crystal data

[Mo(C5H4NO2)2O2] M = 348.12 Monoclinic, a = 13.263 (3) Å b = 7.2470 (14) Å c = 13.264 (3) Å β = 118.540 (9)° V = 1120.0 (4) Å3 Z = 4 Mo Kα radiation μ = 1.20 mm−1 T = 100 (2) K 0.29 × 0.16 × 0.09 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2007 ▶) T min = 0.723, T max = 0.899 37847 measured reflections 3123 independent reflections 2772 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.025 wR(F 2) = 0.058 S = 1.08 3123 reflections 172 parameters H-atom parameters constrained Δρmax = 0.70 e Å−3 Δρmin = −0.52 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXL97; software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808007782/bi2282sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808007782/bi2282Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mo(C5H4NO2)2O2]F000 = 688
Mr = 348.12Dx = 2.065 Mg m3Dm = no Mg m3Dm measured by not measured
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9899 reflections
a = 13.263 (3) Åθ = 1.8–29.6º
b = 7.2470 (14) ŵ = 1.20 mm1
c = 13.264 (3) ÅT = 100 (2) K
β = 118.540 (9)ºNeedle, orange
V = 1120.0 (4) Å30.29 × 0.16 × 0.09 mm
Z = 4
Bruker APEXII CCD diffractometer3123 independent reflections
Radiation source: fine-focus sealed tube2772 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.045
T = 100(2) Kθmax = 29.6º
φ and ω scansθmin = 1.8º
Absorption correction: multi-scan(SADABS; Sheldrick, 2007)h = −18→18
Tmin = 0.723, Tmax = 0.899k = −10→10
37847 measured reflectionsl = −18→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.025H-atom parameters constrained
wR(F2) = 0.058  w = 1/[σ2(Fo2) + (0.0224P)2 + 1.1984P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max = 0.001
3123 reflectionsΔρmax = 0.70 e Å3
172 parametersΔρmin = −0.52 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mo10.248605 (14)0.91497 (2)0.414412 (14)0.01513 (6)
O10.08144 (11)0.8541 (2)0.33241 (11)0.0172 (3)
O20.20602 (12)0.8648 (2)0.55242 (12)0.0176 (3)
O30.40951 (12)0.8995 (2)0.53830 (12)0.0173 (3)
O40.27660 (12)0.6185 (2)0.44705 (12)0.0177 (3)
O50.25461 (12)0.8903 (2)0.28946 (12)0.0196 (3)
O60.25285 (12)1.1491 (2)0.43339 (12)0.0204 (3)
N10.06163 (14)0.7521 (2)0.58314 (14)0.0166 (3)
H1N0.10750.75160.65780.020*
N20.41302 (15)0.4130 (2)0.56670 (15)0.0181 (3)
H2N0.36550.32010.53470.022*
C1−0.04904 (17)0.6950 (3)0.54263 (18)0.0185 (4)
H1−0.07540.65480.59420.022*
C2−0.12129 (17)0.6964 (3)0.42750 (18)0.0206 (4)
H2−0.19890.65940.39870.025*
C3−0.08198 (17)0.7519 (3)0.35098 (17)0.0189 (4)
H3−0.13250.75260.27060.023*
C40.02965 (17)0.8049 (3)0.39344 (16)0.0160 (4)
C50.10352 (16)0.8086 (3)0.51457 (16)0.0148 (4)
C60.37661 (17)0.5850 (3)0.52910 (16)0.0157 (4)
C70.45352 (17)0.7346 (3)0.58207 (16)0.0166 (4)
C80.56213 (17)0.7023 (3)0.66842 (17)0.0203 (4)
H80.61400.80160.70370.024*
C90.59590 (18)0.5190 (3)0.70425 (18)0.0231 (5)
H90.67100.49410.76450.028*
C100.52126 (18)0.3776 (3)0.65289 (18)0.0218 (4)
H100.54440.25420.67700.026*
U11U22U33U12U13U23
Mo10.01552 (9)0.01402 (9)0.01085 (9)0.00111 (6)0.00226 (6)0.00057 (6)
O10.0157 (6)0.0197 (7)0.0102 (6)0.0007 (6)0.0014 (5)0.0007 (5)
O20.0159 (6)0.0189 (7)0.0120 (6)−0.0009 (6)0.0019 (5)−0.0005 (5)
O30.0148 (6)0.0167 (7)0.0146 (7)−0.0010 (5)0.0023 (5)0.0004 (5)
O40.0166 (6)0.0152 (7)0.0150 (7)0.0016 (5)0.0025 (5)0.0001 (5)
O50.0200 (7)0.0226 (8)0.0122 (7)0.0020 (6)0.0045 (6)0.0012 (6)
O60.0233 (7)0.0158 (7)0.0198 (7)0.0012 (6)0.0084 (6)0.0010 (6)
N10.0181 (8)0.0156 (8)0.0113 (7)0.0011 (7)0.0031 (6)−0.0005 (7)
N20.0213 (8)0.0172 (8)0.0168 (8)0.0037 (7)0.0099 (7)0.0026 (7)
C10.0205 (10)0.0137 (9)0.0201 (10)0.0017 (8)0.0086 (8)−0.0009 (8)
C20.0162 (9)0.0193 (10)0.0217 (10)0.0000 (8)0.0053 (8)−0.0043 (8)
C30.0155 (9)0.0184 (10)0.0143 (9)0.0021 (8)0.0003 (7)−0.0031 (8)
C40.0183 (9)0.0122 (9)0.0120 (9)0.0028 (7)0.0028 (7)−0.0011 (7)
C50.0166 (9)0.0089 (8)0.0131 (9)0.0017 (7)0.0025 (7)−0.0016 (7)
C60.0168 (9)0.0183 (10)0.0117 (9)0.0024 (8)0.0066 (7)0.0016 (7)
C70.0172 (9)0.0209 (10)0.0112 (9)0.0016 (8)0.0065 (7)0.0003 (8)
C80.0168 (9)0.0312 (12)0.0114 (9)0.0001 (8)0.0055 (8)0.0001 (8)
C90.0178 (9)0.0384 (13)0.0115 (9)0.0088 (9)0.0057 (8)0.0072 (9)
C100.0236 (10)0.0270 (11)0.0158 (10)0.0114 (9)0.0103 (8)0.0091 (8)
Mo1—O11.9972 (14)N2—H2N0.880
Mo1—O22.1886 (15)C1—C21.361 (3)
Mo1—O31.9790 (14)C1—H10.950
Mo1—O42.1882 (15)C2—C31.403 (3)
Mo1—O51.7062 (15)C2—H20.950
Mo1—O61.7124 (16)C3—C41.364 (3)
O1—C41.336 (3)C3—H30.950
O2—C51.270 (2)C4—C51.427 (3)
O3—C71.335 (2)C6—C71.423 (3)
O4—C61.274 (2)C7—C81.366 (3)
N1—C51.337 (3)C8—C91.410 (3)
N1—C11.364 (3)C8—H80.950
N1—H1N0.880C9—C101.360 (3)
N2—C61.344 (3)C9—H90.950
N2—C101.366 (3)C10—H100.950
O5—Mo1—O6103.48 (7)C1—C2—C3120.52 (19)
O5—Mo1—O3105.57 (7)C1—C2—H2119.7
O6—Mo1—O389.27 (6)C3—C2—H2119.7
O5—Mo1—O190.16 (6)C4—C3—C2119.16 (18)
O6—Mo1—O1104.40 (6)C4—C3—H3120.4
O3—Mo1—O1156.33 (6)C2—C3—H3120.4
O5—Mo1—O490.40 (6)O1—C4—C3126.57 (18)
O6—Mo1—O4162.43 (6)O1—C4—C5113.69 (17)
O3—Mo1—O476.49 (6)C3—C4—C5119.74 (19)
O1—Mo1—O486.00 (6)O2—C5—N1122.93 (17)
O5—Mo1—O2161.00 (6)O2—C5—C4118.70 (18)
O6—Mo1—O292.59 (6)N1—C5—C4118.37 (18)
O3—Mo1—O284.43 (6)O4—C6—N2122.44 (19)
O1—Mo1—O275.87 (6)O4—C6—C7119.02 (18)
O4—Mo1—O276.04 (5)N2—C6—C7118.53 (18)
C4—O1—Mo1119.16 (12)O3—C7—C8125.8 (2)
C5—O2—Mo1112.20 (12)O3—C7—C6113.95 (17)
C7—O3—Mo1119.05 (12)C8—C7—C6120.3 (2)
C6—O4—Mo1111.40 (13)C7—C8—C9118.8 (2)
C5—N1—C1122.94 (17)C7—C8—H8120.6
C5—N1—H1N118.5C9—C8—H8120.6
C1—N1—H1N118.5C10—C9—C8120.20 (19)
C6—N2—C10122.19 (19)C10—C9—H9119.9
C6—N2—H2N118.9C8—C9—H9119.9
C10—N2—H2N118.9C9—C10—N2120.0 (2)
C2—C1—N1119.2 (2)C9—C10—H10120.0
C2—C1—H1120.4N2—C10—H10120.0
N1—C1—H1120.4
O5—Mo1—O1—C4162.99 (15)C2—C3—C4—O1177.13 (19)
O6—Mo1—O1—C4−93.04 (15)C2—C3—C4—C5−1.9 (3)
O3—Mo1—O1—C430.6 (2)Mo1—O2—C5—N1173.36 (15)
O4—Mo1—O1—C472.60 (14)Mo1—O2—C5—C4−6.4 (2)
O2—Mo1—O1—C4−3.99 (13)C1—N1—C5—O2178.72 (18)
O5—Mo1—O2—C5−38.2 (3)C1—N1—C5—C4−1.5 (3)
O6—Mo1—O2—C5109.76 (14)O1—C4—C5—O23.4 (3)
O3—Mo1—O2—C5−161.22 (14)C3—C4—C5—O2−177.45 (18)
O1—Mo1—O2—C55.55 (13)O1—C4—C5—N1−176.45 (17)
O4—Mo1—O2—C5−83.79 (13)C3—C4—C5—N12.7 (3)
O5—Mo1—O3—C7−88.95 (15)Mo1—O4—C6—N2178.53 (15)
O6—Mo1—O3—C7167.25 (15)Mo1—O4—C6—C7−2.4 (2)
O1—Mo1—O3—C741.0 (2)C10—N2—C6—O4178.42 (19)
O4—Mo1—O3—C7−2.36 (14)C10—N2—C6—C7−0.6 (3)
O2—Mo1—O3—C774.58 (14)Mo1—O3—C7—C8−179.11 (16)
O5—Mo1—O4—C6108.44 (14)Mo1—O3—C7—C61.9 (2)
O6—Mo1—O4—C6−34.2 (3)O4—C6—C7—O30.6 (3)
O3—Mo1—O4—C62.52 (13)N2—C6—C7—O3179.69 (17)
O1—Mo1—O4—C6−161.43 (14)O4—C6—C7—C8−178.48 (19)
O2—Mo1—O4—C6−85.01 (14)N2—C6—C7—C80.6 (3)
C5—N1—C1—C2−0.6 (3)O3—C7—C8—C9−179.41 (19)
N1—C1—C2—C31.4 (3)C6—C7—C8—C9−0.4 (3)
C1—C2—C3—C4−0.1 (3)C7—C8—C9—C100.3 (3)
Mo1—O1—C4—C3−177.08 (16)C8—C9—C10—N2−0.3 (3)
Mo1—O1—C4—C52.0 (2)C6—N2—C10—C90.5 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O5i0.882.162.900 (2)142
N2—H2N···O6ii0.881.912.776 (3)167
C3—H3···O6iii0.952.513.428 (3)162
C9—H9···O2iv0.952.383.235 (3)150
Mo1—O11.9972 (14)
Mo1—O22.1886 (15)
Mo1—O31.9790 (14)
Mo1—O42.1882 (15)
Mo1—O51.7062 (15)
Mo1—O61.7124 (16)
O5—Mo1—O6103.48 (7)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O5i0.882.162.900 (2)142
N2—H2N⋯O6ii0.881.912.776 (3)167
C3—H3⋯O6iii0.952.513.428 (3)162
C9—H9⋯O2iv0.952.383.235 (3)150

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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