Literature DB >> 21202018

{μ-6,6'-Dimeth-oxy-2,2'-[ethane-1,2-diylbis(nitrilo-methyl-idyne)]diphenolato}-μ-nitrato-dinitratoterbium(III)zinc(II).

Jing-Rong Chen, Yan Sui, Li Chen, Ji-Wu Wen, Li-Yang Yin.   

Abstract

In the title heteronuclear Zn(II)-Tb(III) complex (systematic name: {6,6'-dimeth-oxy-2,2'-[ethane-1,2-diylbis(nitrilo-methyl-id-yne)]diphenolato-1κ(4)O(6),O(1),O(1'),O(6')}:2κ(4)O(1),N,N',O(1')-μ-nitrato-1:2κ(2)O:O'-dinitrato-1κ(4)O,O'-terbium(III)zinc(II)), [TbZn(C(18)H(18)N(2)O(4))(NO(3))(3)], with the hexa-dentate Schiff base compartmental ligand N,N'-bis-(3-methoxy-salicyl-idene)ethyl-enediamine (H(2)L), the Tb and Zn atoms are triply bridged by two phenolate O atoms of the Schiff base ligand and one nitrate ion. The five-coordinate Zn atom is in a square-pyramidal geometry with the donor centers of two imine N atoms, two phenolate O atoms and one of the bridging nitrate O atoms. The Tb(III) center has a ninefold coordination environment of O atoms, involving the phenolate O atoms, two meth-oxy O atoms, two O atoms from two nitrate ions and one from the bridging nitrate ion. Weak inter-molecular C-H⋯O inter-actions generate a two-dimensional layer structure.

Entities:  

Year:  2008        PMID: 21202018      PMCID: PMC2961047          DOI: 10.1107/S1600536808006958

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Baggio et al. (2000 ▶); Caravan et al. (1999 ▶); Edder et al. (2000 ▶); Knoer et al. (2005 ▶); Sui et al. (2006 ▶, 2007 ▶).

Experimental

Crystal data

[TbZn(C18H18N2O4)(NO3)3] M = 736.66 Monoclinic, a = 10.6818 (4) Å b = 16.5022 (6) Å c = 14.9546 (6) Å β = 99.618 (1)° V = 2599.04 (17) Å3 Z = 4 Mo Kα radiation μ = 3.69 mm−1 T = 293 (2) K 0.33 × 0.22 × 0.12 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.375, T max = 0.666 15507 measured reflections 4431 independent reflections 3722 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.023 wR(F 2) = 0.068 S = 1.00 4431 reflections 345 parameters 2 restraints H-atom parameters constrained Δρmax = 0.56 e Å−3 Δρmin = −0.52 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2; data reduction: APEX2; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: APEX2; software used to prepare material for publication: APEX2 and publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808006958/at2549sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808006958/at2549Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[TbZn(C18H18N2O4)(NO3)3]F000 = 1440
Mr = 736.66Dx = 1.883 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 8984 reflections
a = 10.6818 (4) Åθ = 1.9–25.0º
b = 16.5022 (6) ŵ = 3.69 mm1
c = 14.9546 (6) ÅT = 293 (2) K
β = 99.6180 (10)ºBlock, yellow
V = 2599.04 (17) Å30.33 × 0.22 × 0.12 mm
Z = 4
Bruker APEXII area-detector diffractometer4431 independent reflections
Radiation source: fine-focus sealed tube3722 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.022
T = 293(2) Kθmax = 25.0º
φ and ω scanθmin = 1.9º
Absorption correction: multi-scan(SADABS; Bruker, 2004)h = −12→12
Tmin = 0.375, Tmax = 0.666k = −19→18
15507 measured reflectionsl = −17→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.023H-atom parameters constrained
wR(F2) = 0.068  w = 1/[σ2(Fo2) + (0.044P)2 + 0.9659P] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max = 0.001
4431 reflectionsΔρmax = 0.56 e Å3
345 parametersΔρmin = −0.52 e Å3
2 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Tb10.637703 (16)0.109788 (10)0.776551 (11)0.04217 (8)
Zn10.77995 (4)0.03607 (2)0.61063 (3)0.04267 (12)
C10.7286 (3)0.2144 (2)0.6077 (2)0.0439 (8)
O30.6387 (3)0.26176 (14)0.72934 (18)0.0516 (6)
O20.7099 (2)0.14261 (15)0.64411 (17)0.0503 (6)
N20.8021 (3)0.0844 (2)0.4882 (2)0.0527 (8)
O120.4281 (3)0.12967 (19)0.6805 (2)0.0638 (8)
O40.5108 (2)−0.02009 (15)0.80424 (17)0.0504 (6)
C160.5882 (3)−0.0716 (2)0.6797 (2)0.0422 (8)
O110.4437 (3)0.16395 (19)0.8203 (2)0.0628 (7)
O60.9420 (2)0.02850 (16)0.69642 (19)0.0533 (6)
O10.6478 (2)−0.00117 (14)0.68386 (17)0.0494 (6)
N10.7505 (3)−0.06699 (19)0.5360 (2)0.0488 (7)
C150.5114 (3)−0.0853 (2)0.7453 (3)0.0455 (8)
N30.3756 (3)0.1600 (2)0.7427 (3)0.0645 (10)
C110.5965 (3)−0.1320 (2)0.6144 (3)0.0473 (9)
C70.8020 (4)0.1592 (3)0.4688 (3)0.0543 (10)
H70.81860.17290.41160.065*
N40.9460 (3)0.0491 (2)0.7789 (3)0.0664 (9)
O50.8517 (3)0.07391 (19)0.81165 (19)0.0608 (7)
C60.7784 (4)0.2255 (2)0.5279 (3)0.0505 (9)
C100.6736 (4)−0.1246 (2)0.5428 (3)0.0514 (10)
H100.6658−0.16500.49880.062*
O130.2669 (3)0.1838 (3)0.7280 (3)0.1126 (15)
O71.0729 (4)0.0402 (3)0.8425 (4)0.1448 (19)
C120.5286 (4)−0.2039 (2)0.6189 (3)0.0612 (11)
H120.5315−0.24380.57540.073*
O80.6731 (3)0.07585 (17)0.94168 (19)0.0623 (7)
O90.7154 (3)0.19769 (16)0.90722 (18)0.0606 (7)
N50.7195 (4)0.1437 (2)0.9680 (2)0.0634 (9)
C20.6904 (3)0.2826 (2)0.6531 (2)0.0457 (8)
C170.4344 (4)−0.0290 (3)0.8748 (3)0.0648 (12)
H17A0.3470−0.03610.84780.097*
H17B0.44270.01870.91220.097*
H17C0.4627−0.07540.91130.097*
C90.8243 (4)−0.0616 (3)0.4619 (3)0.0580 (11)
H9A0.7976−0.10360.41750.070*
H9B0.9138−0.06920.48540.070*
C30.7059 (4)0.3594 (2)0.6228 (3)0.0563 (10)
H30.68130.40380.65400.068*
C50.7933 (4)0.3058 (3)0.4989 (3)0.0651 (12)
H50.82780.31470.44660.078*
C140.4478 (4)−0.1572 (2)0.7495 (3)0.0594 (11)
H140.3985−0.16580.79430.071*
C130.4583 (4)−0.2167 (3)0.6858 (4)0.0724 (13)
H130.4169−0.26590.68860.087*
C80.8030 (4)0.0213 (3)0.4178 (3)0.0604 (11)
H8A0.87000.03270.38310.073*
H8B0.72270.02180.37640.073*
C40.7583 (4)0.3706 (3)0.5456 (3)0.0631 (12)
H40.76990.42280.52510.076*
C180.5764 (5)0.3264 (2)0.7697 (3)0.0668 (12)
H18A0.63430.37080.78420.100*
H18B0.54970.30710.82410.100*
H18C0.50370.34430.72770.100*
O100.7648 (4)0.1569 (2)1.0465 (2)0.1072 (14)
U11U22U33U12U13U23
Tb10.04948 (12)0.04348 (12)0.03743 (12)−0.00214 (7)0.01852 (8)−0.00262 (7)
Zn10.0471 (2)0.0457 (2)0.0388 (2)0.00041 (18)0.01728 (18)−0.00323 (17)
C10.0430 (19)0.048 (2)0.042 (2)−0.0022 (16)0.0099 (16)0.0065 (16)
O30.0677 (16)0.0417 (14)0.0496 (16)0.0050 (12)0.0221 (13)−0.0013 (11)
O20.0664 (17)0.0405 (13)0.0517 (16)0.0042 (12)0.0320 (13)0.0052 (12)
N20.0564 (19)0.066 (2)0.0399 (19)0.0074 (16)0.0209 (15)−0.0010 (15)
O120.0532 (16)0.092 (2)0.0479 (18)0.0077 (15)0.0122 (14)−0.0148 (15)
O40.0574 (15)0.0521 (15)0.0474 (16)−0.0096 (12)0.0253 (12)−0.0004 (12)
C160.0383 (18)0.0426 (19)0.046 (2)−0.0018 (15)0.0084 (16)−0.0010 (16)
O110.0608 (17)0.085 (2)0.0482 (18)0.0038 (15)0.0240 (15)−0.0143 (14)
O60.0474 (14)0.0574 (15)0.0565 (15)0.0035 (12)0.0126 (12)−0.0068 (12)
O10.0631 (16)0.0427 (14)0.0500 (16)−0.0133 (11)0.0315 (13)−0.0112 (11)
N10.0485 (17)0.0564 (19)0.0447 (19)0.0008 (15)0.0172 (14)−0.0107 (15)
C150.045 (2)0.0453 (19)0.047 (2)−0.0030 (16)0.0111 (17)0.0012 (16)
N30.053 (2)0.076 (3)0.069 (3)0.0059 (18)0.022 (2)−0.0088 (19)
C110.045 (2)0.044 (2)0.054 (2)−0.0018 (16)0.0091 (18)−0.0069 (17)
C70.054 (2)0.071 (3)0.043 (2)−0.002 (2)0.0225 (18)0.0113 (19)
N40.062 (2)0.067 (2)0.071 (2)0.0024 (17)0.0139 (18)−0.0074 (18)
O50.0519 (15)0.081 (2)0.0492 (17)0.0075 (14)0.0077 (12)−0.0072 (14)
C60.052 (2)0.056 (2)0.044 (2)−0.0040 (18)0.0114 (18)0.0131 (17)
C100.052 (2)0.052 (2)0.050 (2)0.0066 (18)0.0060 (18)−0.0182 (17)
O130.059 (2)0.178 (4)0.103 (3)0.033 (2)0.020 (2)−0.033 (3)
O70.105 (3)0.164 (5)0.147 (4)0.014 (3)−0.031 (3)−0.013 (4)
C120.057 (2)0.049 (2)0.078 (3)−0.0045 (19)0.013 (2)−0.016 (2)
O80.087 (2)0.0564 (17)0.0460 (17)−0.0187 (15)0.0187 (15)−0.0008 (13)
O90.085 (2)0.0527 (16)0.0463 (17)−0.0165 (14)0.0161 (14)−0.0020 (13)
N50.077 (2)0.072 (2)0.045 (2)−0.023 (2)0.0195 (18)−0.0063 (18)
C20.051 (2)0.0432 (19)0.043 (2)−0.0007 (16)0.0092 (17)0.0035 (16)
C170.070 (3)0.074 (3)0.061 (3)−0.014 (2)0.039 (2)0.001 (2)
C90.050 (2)0.073 (3)0.053 (3)0.003 (2)0.0170 (19)−0.022 (2)
C30.065 (3)0.045 (2)0.056 (3)−0.0018 (19)0.001 (2)0.0043 (18)
C50.068 (3)0.077 (3)0.051 (3)−0.013 (2)0.012 (2)0.022 (2)
C140.053 (2)0.058 (2)0.071 (3)−0.0129 (19)0.021 (2)0.007 (2)
C130.070 (3)0.051 (2)0.101 (4)−0.023 (2)0.025 (3)−0.008 (2)
C80.065 (3)0.081 (3)0.040 (2)0.005 (2)0.0209 (19)−0.010 (2)
C40.080 (3)0.052 (2)0.056 (3)−0.011 (2)0.006 (2)0.016 (2)
C180.088 (3)0.048 (2)0.069 (3)0.012 (2)0.029 (2)−0.008 (2)
O100.156 (4)0.118 (3)0.043 (2)−0.058 (3)0.005 (2)−0.0054 (19)
Tb1—O12.310 (2)C11—C121.398 (5)
Tb1—O22.307 (2)C11—C101.462 (5)
Tb1—O32.606 (2)C7—C61.456 (6)
Tb1—O42.606 (2)C7—H70.9300
Tb1—O52.335 (3)N4—O51.260 (4)
Tb1—O82.498 (3)N4—O71.528 (5)
Tb1—O92.464 (3)C6—C51.411 (5)
Tb1—O112.444 (3)C10—H100.9300
Tb1—O122.472 (3)C12—C131.363 (6)
Zn1—O12.021 (2)C12—H120.9300
Zn1—O22.007 (2)O8—N51.261 (4)
Zn1—O61.978 (3)O9—N51.269 (4)
Zn1—N12.030 (3)N5—O101.212 (5)
Zn1—N22.046 (3)C2—C31.367 (5)
C1—O21.333 (4)C17—H17A0.9600
C1—C61.398 (5)C17—H17B0.9600
C1—C21.409 (5)C17—H17C0.9600
O3—C21.390 (4)C9—C81.520 (6)
O3—C181.442 (4)C9—H9A0.9700
N2—C71.267 (5)C9—H9B0.9700
N2—C81.483 (5)C3—C41.377 (6)
O12—N31.266 (4)C3—H30.9300
O4—C151.391 (4)C5—C41.363 (6)
O4—C171.446 (4)C5—H50.9300
C16—O11.322 (4)C14—C131.386 (6)
C16—C151.399 (5)C14—H140.9300
C16—C111.408 (5)C13—H130.9300
O11—N31.264 (4)C8—H8A0.9700
O6—N41.273 (4)C8—H8B0.9700
N1—C101.271 (5)C4—H40.9300
N1—C91.466 (5)C18—H18A0.9600
C15—C141.373 (5)C18—H18B0.9600
N3—O131.211 (5)C18—H18C0.9600
O2—Tb1—O167.35 (9)C14—C15—O4125.8 (3)
O2—Tb1—O578.32 (10)C14—C15—C16121.6 (4)
O1—Tb1—O577.97 (10)O4—C15—C16112.6 (3)
O2—Tb1—O11124.32 (10)O13—N3—O11122.5 (4)
O1—Tb1—O11125.26 (9)O13—N3—O12121.6 (4)
O5—Tb1—O11151.00 (10)O11—N3—O12116.0 (3)
O2—Tb1—O9115.22 (9)C12—C11—C16118.3 (4)
O1—Tb1—O9154.06 (10)C12—C11—C10117.8 (3)
O5—Tb1—O977.49 (10)C16—C11—C10123.8 (3)
O11—Tb1—O976.16 (10)N2—C7—C6125.9 (3)
O2—Tb1—O1282.53 (10)N2—C7—H7117.0
O1—Tb1—O1283.41 (10)C6—C7—H7117.0
O5—Tb1—O12157.24 (10)O5—N4—O6124.3 (3)
O11—Tb1—O1251.74 (9)O5—N4—O7118.2 (4)
O9—Tb1—O12122.37 (10)O6—N4—O7117.4 (4)
O2—Tb1—O8152.16 (10)N4—O5—Tb1144.2 (3)
O1—Tb1—O8113.64 (9)C1—C6—C5117.7 (4)
O5—Tb1—O874.94 (10)C1—C6—C7123.3 (3)
O11—Tb1—O879.19 (10)C5—C6—C7118.6 (4)
O9—Tb1—O851.15 (9)N1—C10—C11124.9 (3)
O12—Tb1—O8125.24 (10)N1—C10—H10117.6
O2—Tb1—O4125.94 (9)C11—C10—H10117.6
O1—Tb1—O461.39 (8)C13—C12—C11121.4 (4)
O5—Tb1—O4105.75 (10)C13—C12—H12119.3
O11—Tb1—O476.80 (9)C11—C12—H12119.3
O9—Tb1—O4118.27 (8)N5—O8—Tb195.5 (2)
O12—Tb1—O475.93 (10)N5—O9—Tb197.0 (2)
O8—Tb1—O469.84 (8)O10—N5—O8122.4 (4)
O2—Tb1—O361.59 (8)O10—N5—O9121.9 (4)
O1—Tb1—O3126.69 (8)O8—N5—O9115.8 (3)
O5—Tb1—O3104.88 (10)C3—C2—O3126.0 (4)
O11—Tb1—O376.27 (9)C3—C2—C1121.4 (4)
O9—Tb1—O368.42 (9)O3—C2—C1112.6 (3)
O12—Tb1—O376.06 (10)O4—C17—H17A109.5
O8—Tb1—O3118.47 (9)O4—C17—H17B109.5
O4—Tb1—O3149.37 (8)H17A—C17—H17B109.5
O6—Zn1—O2102.47 (11)O4—C17—H17C109.5
O6—Zn1—O1104.10 (11)H17A—C17—H17C109.5
O2—Zn1—O178.92 (10)H17B—C17—H17C109.5
O6—Zn1—N1110.00 (12)N1—C9—C8108.8 (3)
O2—Zn1—N1147.27 (12)N1—C9—H9A109.9
O1—Zn1—N189.14 (11)C8—C9—H9A109.9
O6—Zn1—N2112.68 (12)N1—C9—H9B109.9
O2—Zn1—N289.16 (12)C8—C9—H9B109.9
O1—Zn1—N2143.00 (12)H9A—C9—H9B108.3
N1—Zn1—N282.26 (13)C2—C3—C4119.4 (4)
O2—C1—C6124.7 (3)C2—C3—H3120.3
O2—C1—C2116.0 (3)C4—C3—H3120.3
C6—C1—C2119.2 (3)C4—C5—C6121.6 (4)
C2—O3—C18115.8 (3)C4—C5—H5119.2
C2—O3—Tb1118.7 (2)C6—C5—H5119.2
C18—O3—Tb1125.1 (2)C15—C14—C13118.9 (4)
C1—O2—Zn1126.1 (2)C15—C14—H14120.6
C1—O2—Tb1130.8 (2)C13—C14—H14120.6
Zn1—O2—Tb1101.57 (10)C12—C13—C14120.8 (4)
C7—N2—C8121.4 (3)C12—C13—H13119.6
C7—N2—Zn1126.1 (3)C14—C13—H13119.6
C8—N2—Zn1112.2 (3)N2—C8—C9110.0 (3)
N3—O12—Tb195.4 (2)N2—C8—H8A109.7
C15—O4—C17116.5 (3)C9—C8—H8A109.7
C15—O4—Tb1118.6 (2)N2—C8—H8B109.7
C17—O4—Tb1124.9 (2)C9—C8—H8B109.7
O1—C16—C15116.3 (3)H8A—C8—H8B108.2
O1—C16—C11124.7 (3)C5—C4—C3120.7 (4)
C15—C16—C11119.0 (3)C5—C4—H4119.7
N3—O11—Tb196.8 (2)C3—C4—H4119.7
N4—O6—Zn1119.7 (2)O3—C18—H18A109.5
C16—O1—Zn1128.1 (2)O3—C18—H18B109.5
C16—O1—Tb1130.9 (2)H18A—C18—H18B109.5
Zn1—O1—Tb1101.02 (9)O3—C18—H18C109.5
C10—N1—C9122.8 (3)H18A—C18—H18C109.5
C10—N1—Zn1128.7 (3)H18B—C18—H18C109.5
C9—N1—Zn1108.1 (2)
D—H···AD—HH···AD···AD—H···A
C5—H5···O11i0.932.453.376 (5)173
C9—H9A···O13ii0.972.543.487 (6)165
Table 1

Selected bond lengths (Å)

Tb1—O12.310 (2)
Tb1—O22.307 (2)
Tb1—O32.606 (2)
Tb1—O42.606 (2)
Tb1—O52.335 (3)
Tb1—O82.498 (3)
Tb1—O92.464 (3)
Tb1—O112.444 (3)
Tb1—O122.472 (3)
Zn1—O12.021 (2)
Zn1—O22.007 (2)
Zn1—O61.978 (3)
Zn1—N12.030 (3)
Zn1—N22.046 (3)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5⋯O11i0.932.453.376 (5)173
C9—H9A⋯O13ii0.972.543.487 (6)165

Symmetry codes: (i) ; (ii) .

  4 in total

1.  Unusual electronic effects of electron-withdrawing sulfonamide groups in optically and magnetically active self-assembled noncovalent heterodimetallic d-f podates.

Authors:  C Edder; C Piguet; G Bernardinelli; J Mareda; C G Bochet; J C Bünzli; G Hopfgartner
Journal:  Inorg Chem       Date:  2000-10-30       Impact factor: 5.165

2.  Gadolinium(III) Chelates as MRI Contrast Agents: Structure, Dynamics, and Applications.

Authors:  P Caravan; J J Ellison; T J McMurry; R B Lauffer
Journal:  Chem Rev       Date:  1999-09-08       Impact factor: 60.622

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Syntheses, structures, and magnetic properties of diphenoxo-bridged M(II)Ln(III) complexes derived from N,N'-ethylenebis(3-ethoxysalicylaldiimine) (M = Cu or Ni; Ln = Ce-Yb): observation of surprisingly strong exchange interactions.

Authors:  Rajesh Koner; Hsin-Huang Lin; Ho-Hsiang Wei; Sasankasekhar Mohanta
Journal:  Inorg Chem       Date:  2005-05-16       Impact factor: 5.165

  4 in total
  1 in total

1.  Retraction of articles.

Authors: 
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-17
  1 in total

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