Literature DB >> 21202008

Poly[[μ(2)-aqua-aqua-(μ(3)-3,5-dinitro-salicylato)barium(II)] monohydrate].

Wen-Dong Song1, Run-Zhen Fan, Chang-Sheng Gu, Xiao-Min Hao.   

Abstract

In the title coordination polymer, {[Ba(C(7)H(2)N(2)O(7))(H(2)O)(2)]·H(2)O}(n), the Ba(II) atom is ten-coordinated by seven O atoms from four 3,5-dinitro-salicylatate ligands, two μ(2)-bridging aqua ligands and one water mol-ecule. The coordination mode is best described as a bicapped square-anti-prismatic geometry. The 3,5-dinitrosalicylatate ligands bridge three Ba atoms. Centrosymmetrically related dinuclear barium units, with a BaBa separation of 4.767 (5) Å, form infinite chains, which are further self-assembled into a supra-molecular network through inter-molecular O-H⋯O hydrogen-bonding inter-actions between O atoms of 3,5-dinitro-salicylatate ligands and water mol-ecules.

Entities:  

Year:  2008        PMID: 21202008      PMCID: PMC2960902          DOI: 10.1107/S1600536808006338

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Song et al. (2007 ▶).

Experimental

Crystal data

[Ba(C7H2N2O7)(H2O)2]·H2O M = 417.49 Monoclinic, a = 11.9649 (6) Å b = 4.1866 (2) Å c = 26.121 (1) Å β = 109.332 (3)° V = 1234.7 (1) Å3 Z = 4 Mo Kα radiation μ = 3.27 mm−1 T = 296 (2) K 0.30 × 0.26 × 0.23 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.392, T max = 0.471 8615 measured reflections 2374 independent reflections 2189 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.067 S = 1.05 2374 reflections 199 parameters 9 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.03 e Å−3 Δρmin = −1.30 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808006338/im2052sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808006338/im2052Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ba(C7H2N2O7)(H2O)2]·H2OF000 = 800
Mr = 417.49Dx = 2.246 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5837 reflections
a = 11.9649 (6) Åθ = 2.8–27.9º
b = 4.1866 (2) ŵ = 3.27 mm1
c = 26.121 (1) ÅT = 296 (2) K
β = 109.332 (3)ºBlock, yellow
V = 1234.7 (1) Å30.30 × 0.26 × 0.23 mm
Z = 4
Bruker APEXII area-detector diffractometer2374 independent reflections
Radiation source: fine-focus sealed tube2189 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.041
T = 296(2) Kθmax = 26.0º
φ and ω scansθmin = 1.7º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −14→14
Tmin = 0.392, Tmax = 0.472k = −4→4
8615 measured reflectionsl = −31→32
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.026H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.067  w = 1/[σ2(Fo2) + (0.0339P)2 + 1.4739P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
2374 reflectionsΔρmax = 1.03 e Å3
199 parametersΔρmin = −1.30 e Å3
9 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ba10.698106 (16)0.59849 (4)0.002749 (8)0.01250 (10)
O10.7177 (2)0.1028 (5)0.06998 (10)0.0150 (5)
O20.5320 (2)−0.3574 (6)0.05297 (11)0.0211 (6)
O30.4012 (2)−0.0694 (6)0.07602 (11)0.0190 (6)
O40.5934 (3)0.0066 (8)0.28282 (12)0.0311 (7)
O50.7491 (3)0.3054 (8)0.31157 (12)0.0359 (7)
O60.9954 (3)0.3764 (8)0.19294 (14)0.0416 (9)
O70.8915 (2)0.5460 (7)0.11347 (12)0.0251 (6)
N10.6755 (3)0.1544 (8)0.27501 (14)0.0245 (7)
N20.9007 (3)0.4015 (7)0.15565 (14)0.0205 (7)
C10.5067 (3)−0.1530 (8)0.08248 (14)0.0116 (7)
C20.6052 (3)−0.0051 (9)0.12815 (14)0.0129 (7)
C30.5950 (3)0.0128 (9)0.17862 (15)0.0167 (7)
H30.5270−0.06290.18440.020*
C40.6874 (3)0.1461 (9)0.22201 (15)0.0178 (8)
C50.7878 (3)0.2691 (9)0.21433 (15)0.0191 (8)
H50.84880.35520.24310.023*
C60.7951 (3)0.2603 (9)0.16271 (14)0.0158 (7)
C70.7074 (3)0.1200 (8)0.11687 (15)0.0146 (8)
O1W0.8608 (2)0.1295 (6)0.00092 (12)0.0205 (6)
H2W0.922 (2)0.101 (10)0.0272 (9)0.031*
H1W0.881 (3)0.137 (10)−0.0265 (9)0.031*
O2W0.7483 (2)0.6467 (6)−0.09980 (12)0.0223 (6)
H3W0.688 (2)0.758 (8)−0.1068 (17)0.033*
H4W0.732 (3)0.484 (6)−0.1189 (16)0.033*
O3W0.0565 (2)0.9715 (8)0.08622 (12)0.0255 (6)
H5W0.110 (3)1.093 (8)0.1033 (15)0.038*
H6W0.047 (4)0.837 (8)0.1074 (13)0.038*
U11U22U33U12U13U23
Ba10.01402 (13)0.01055 (14)0.01455 (15)−0.00009 (7)0.00690 (10)−0.00038 (8)
O10.0191 (13)0.0156 (14)0.0133 (13)−0.0010 (9)0.0091 (11)−0.0007 (10)
O20.0199 (13)0.0222 (15)0.0235 (15)−0.0031 (10)0.0105 (12)−0.0089 (11)
O30.0142 (12)0.0185 (15)0.0238 (15)0.0005 (10)0.0055 (11)−0.0015 (11)
O40.0331 (16)0.0413 (17)0.0244 (16)−0.0037 (14)0.0167 (13)0.0019 (15)
O50.0411 (18)0.0464 (19)0.0186 (16)−0.0102 (15)0.0077 (14)−0.0100 (15)
O60.0227 (16)0.066 (3)0.033 (2)−0.0138 (14)0.0056 (15)0.0021 (16)
O70.0248 (14)0.0226 (15)0.0300 (17)−0.0044 (11)0.0117 (12)0.0052 (13)
N10.0296 (18)0.0263 (18)0.0184 (18)0.0037 (14)0.0089 (15)−0.0003 (14)
N20.0151 (15)0.0223 (19)0.0230 (19)−0.0046 (12)0.0049 (14)−0.0040 (14)
C10.0132 (16)0.0130 (18)0.0082 (17)−0.0010 (13)0.0030 (14)0.0023 (13)
C20.0163 (16)0.0102 (17)0.0128 (18)0.0025 (14)0.0056 (14)0.0018 (14)
C30.0178 (17)0.0153 (18)0.0178 (19)0.0006 (15)0.0071 (15)0.0015 (16)
C40.0214 (18)0.021 (2)0.0116 (18)0.0022 (14)0.0060 (15)−0.0015 (15)
C50.0190 (17)0.018 (2)0.0166 (19)−0.0003 (15)0.0013 (15)−0.0030 (16)
C60.0129 (16)0.016 (2)0.0181 (19)−0.0012 (14)0.0042 (14)−0.0002 (15)
C70.0184 (18)0.0121 (19)0.0146 (19)0.0044 (13)0.0074 (15)0.0040 (13)
O1W0.0156 (13)0.0291 (16)0.0186 (15)0.0036 (10)0.0079 (11)0.0005 (12)
O2W0.0290 (15)0.0188 (15)0.0222 (15)0.0010 (11)0.0126 (13)−0.0019 (11)
O3W0.0206 (14)0.0334 (17)0.0235 (16)−0.0020 (12)0.0086 (12)0.0046 (13)
Ba1—O12.678 (2)O5—N11.237 (4)
Ba1—O1i2.706 (2)O6—N21.230 (5)
Ba1—O2i2.726 (3)O7—N21.230 (4)
Ba1—O1W2.777 (3)N1—C41.438 (5)
Ba1—O3ii2.813 (3)N2—C61.462 (4)
Ba1—O2iii2.840 (3)C1—C21.505 (5)
Ba1—O2W2.940 (3)C1—Ba1iii3.290 (3)
Ba1—O1Wi2.966 (3)C2—C31.366 (5)
Ba1—O3iii2.989 (3)C2—C71.447 (5)
Ba1—O73.056 (3)C3—C41.410 (5)
Ba1—C1iii3.290 (3)C3—H30.9300
Ba1—Ba1i4.18660 (19)C4—C51.382 (5)
Ba1—H3W2.90 (5)C5—C61.380 (5)
O1—C71.273 (4)C5—H50.9300
O1—Ba1iv2.706 (2)C6—C71.431 (5)
O2—C11.254 (4)O1W—Ba1iv2.966 (3)
O2—Ba1iv2.726 (3)O1W—H2W0.83 (4)
O2—Ba1iii2.840 (3)O1W—H1W0.83 (4)
O3—C11.266 (4)O2W—H3W0.83 (4)
O3—Ba1ii2.813 (3)O2W—H4W0.83 (4)
O3—Ba1iii2.989 (3)O3W—H5W0.82 (4)
O4—N11.233 (4)O3W—H6W0.83 (4)
O1—Ba1—O1i102.07 (8)O7—Ba1—Ba1i94.12 (5)
O1—Ba1—O2i69.92 (8)C1iii—Ba1—Ba1i124.53 (6)
O1i—Ba1—O2i63.59 (7)O1—Ba1—H3W142.3 (6)
O1—Ba1—O1W63.49 (7)O1i—Ba1—H3W115.3 (6)
O1i—Ba1—O1W130.70 (8)O2i—Ba1—H3W131.3 (3)
O2i—Ba1—O1W133.10 (8)O1W—Ba1—H3W86.9 (3)
O1—Ba1—O3ii161.23 (8)O3ii—Ba1—H3W41.2 (3)
O1i—Ba1—O3ii81.53 (7)O2iii—Ba1—H3W81.9 (7)
O2i—Ba1—O3ii96.08 (8)O2W—Ba1—H3W16.3 (6)
O1W—Ba1—O3ii127.72 (8)O1Wi—Ba1—H3W68.0 (7)
O1—Ba1—O2iii85.43 (8)O3iii—Ba1—H3W67.3 (7)
O1i—Ba1—O2iii118.10 (7)O7—Ba1—H3W136.2 (6)
O2i—Ba1—O2iii62.17 (9)C1iii—Ba1—H3W71.6 (7)
O1W—Ba1—O2iii107.83 (7)Ba1i—Ba1—H3W76.7 (6)
O3ii—Ba1—O2iii76.78 (8)C7—O1—Ba1124.9 (2)
O1—Ba1—O2W130.60 (7)C7—O1—Ba1iv130.8 (2)
O1i—Ba1—O2W122.52 (7)Ba1—O1—Ba1iv102.07 (8)
O2i—Ba1—O2W146.64 (8)C1—O2—Ba1iv134.8 (2)
O1W—Ba1—O2W71.15 (8)C1—O2—Ba1iii99.6 (2)
O3ii—Ba1—O2W56.60 (7)Ba1iv—O2—Ba1iii117.83 (9)
O2iii—Ba1—O2W90.76 (8)C1—O3—Ba1ii116.9 (2)
O1—Ba1—O1Wi132.52 (7)C1—O3—Ba1iii92.2 (2)
O1i—Ba1—O1Wi60.61 (7)Ba1ii—O3—Ba1iii92.33 (8)
O2i—Ba1—O1Wi122.95 (7)N2—O7—Ba1134.3 (2)
O1W—Ba1—O1Wi93.55 (7)O4—N1—O5122.1 (3)
O3ii—Ba1—O1Wi65.38 (7)O4—N1—C4119.0 (3)
O2iii—Ba1—O1Wi142.04 (8)O5—N1—C4118.9 (3)
O2W—Ba1—O1Wi66.46 (8)O7—N2—O6122.5 (3)
O1—Ba1—O3iii78.80 (7)O7—N2—C6119.2 (3)
O1i—Ba1—O3iii162.60 (7)O6—N2—C6118.3 (3)
O2i—Ba1—O3iii101.22 (7)O2—C1—O3122.7 (3)
O1W—Ba1—O3iii65.50 (7)O2—C1—C2118.9 (3)
O3ii—Ba1—O3iii92.33 (8)O3—C1—C2118.5 (3)
O2iii—Ba1—O3iii44.50 (7)O2—C1—Ba1iii58.32 (18)
O2W—Ba1—O3iii65.05 (7)O3—C1—Ba1iii65.18 (18)
O1Wi—Ba1—O3iii131.14 (7)C2—C1—Ba1iii169.1 (2)
O1—Ba1—O756.58 (7)C3—C2—C7121.9 (3)
O1i—Ba1—O764.28 (8)C3—C2—C1119.4 (3)
O2i—Ba1—O789.64 (8)C7—C2—C1118.7 (3)
O1W—Ba1—O769.50 (8)C2—C3—C4120.0 (3)
O3ii—Ba1—O7138.31 (7)C2—C3—H3120.0
O2iii—Ba1—O7139.60 (8)C4—C3—H3120.0
O2W—Ba1—O7123.25 (7)C5—C4—C3121.3 (3)
O1Wi—Ba1—O776.92 (7)C5—C4—N1119.9 (3)
O3iii—Ba1—O7127.03 (7)C3—C4—N1118.8 (3)
O1—Ba1—C1iii83.60 (8)C6—C5—C4118.1 (3)
O1i—Ba1—C1iii140.04 (8)C6—C5—H5121.0
O2i—Ba1—C1iii82.29 (8)C4—C5—H5121.0
O1W—Ba1—C1iii87.53 (8)C5—C6—C7124.2 (3)
O3ii—Ba1—C1iii82.12 (8)C5—C6—N2116.7 (3)
O2iii—Ba1—C1iii22.07 (8)C7—C6—N2119.1 (3)
O2W—Ba1—C1iii75.72 (8)O1—C7—C6123.4 (3)
O1Wi—Ba1—C1iii139.44 (8)O1—C7—C2122.2 (3)
O3iii—Ba1—C1iii22.61 (8)C6—C7—C2114.4 (3)
O7—Ba1—C1iii139.53 (8)Ba1—O1W—Ba1iv93.55 (7)
O1—Ba1—Ba1i140.79 (5)Ba1—O1W—H2W121 (3)
O1i—Ba1—Ba1i38.72 (5)Ba1iv—O1W—H2W107 (3)
O2i—Ba1—Ba1i86.11 (5)Ba1—O1W—H1W113 (3)
O1W—Ba1—Ba1i135.00 (5)Ba1iv—O1W—H1W115 (3)
O3ii—Ba1—Ba1i45.50 (5)H2W—O1W—H1W106.4 (17)
O2iii—Ba1—Ba1i110.82 (5)Ba1—O2W—H3W79 (3)
O2W—Ba1—Ba1i86.06 (5)Ba1—O2W—H4W114 (4)
O1Wi—Ba1—Ba1i41.45 (5)H3W—O2W—H4W108 (4)
O3iii—Ba1—Ba1i137.83 (5)H5W—O3W—H6W108 (4)
D—H···AD—HH···AD···AD—H···A
O3W—H6W···O7v0.82 (3)2.27 (3)2.916 (4)135 (4)
O3W—H5W···O5vi0.82 (4)2.60 (4)2.985 (4)110 (3)
O3W—H5W···O2Wvii0.82 (4)2.04 (3)2.755 (4)145 (4)
O2W—H4W···N1viii0.83 (3)2.69 (4)3.340 (4)137 (4)
O2W—H4W···O4viii0.83 (3)2.55 (4)3.080 (4)123 (3)
O2W—H4W···O5viii0.83 (3)2.25 (3)2.993 (4)150 (5)
O2W—H3W···O3ii0.83 (3)2.01 (2)2.730 (4)145 (4)
O1W—H1W···O3Wii0.83 (3)1.991 (16)2.798 (4)164 (4)
O1W—H2W···O3Wix0.83 (3)1.90 (3)2.725 (4)171 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3W—H6W⋯O7i0.82 (3)2.27 (3)2.916 (4)135 (4)
O3W—H5W⋯O5ii0.82 (4)2.60 (4)2.985 (4)110 (3)
O3W—H5W⋯O2Wiii0.82 (4)2.04 (3)2.755 (4)145 (4)
O2W—H4W⋯N1iv0.83 (3)2.69 (4)3.340 (4)137 (4)
O2W—H4W⋯O4iv0.83 (3)2.55 (4)3.080 (4)123 (3)
O2W—H4W⋯O5iv0.83 (3)2.25 (3)2.993 (4)150 (5)
O2W—H3W⋯O3v0.83 (3)2.01 (2)2.730 (4)145 (4)
O1W—H1W⋯O3Wv0.83 (3)1.991 (16)2.798 (4)164 (4)
O1W—H2W⋯O3Wvi0.83 (3)1.90 (3)2.725 (4)171 (4)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

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