Literature DB >> 21202000

trans-Diaqua-bis{1,3-bis-[5-(2-pyrid-yl)-2H-tetra-zol-2-yl]propane}zinc(II) bis-(perchlorate).

Hugo Gallardo1, Fernando Molin, Adailton J Bortoluzzi, Ademir Neves.   

Abstract

The Zn(II) ion in the title compound, [Zn(C(15)H(14)N(10))(H(2)O)(2)](ClO(4))(2), lies on a centre of symmetry. The distorted N(4)O(2) octa-hedral coordination environment around the Zn atom is composed of two 1,3-bis-[5-(2-pyrid-yl)-2H-tetra-zol-2-yl]propane ligands (L1) and two water mol-ecules, coordinated in trans positions. The ligand acts as a typical bidentate chelating ligand through one of its 2-pyridyl-2H-tetra-zole units, forming a five-membered Zn-N-C-C-N metallacycle with a small N-Zn-N bite angle [77.40 (8)°]. The other 2-pyridyl-2H-tetra-zole unit remains uncoordinated. The average Zn-N distance (2.156 Å) is somewhat longer than the distance between the Zn(II) center and the aqua ligand [2.108 (2) Å]. The coordinated pyrid-yl-tetra-zoyl rings are quasi-coplanar, making a dihedral angle of 1.9 (2)°, while the uncoordinated rings show a larger inter-planar angle of 21.3 (2)°. The flexible propane spacer displays a zigzag chain. Inter-molecular O-H⋯N and O-H⋯O inter-actions result in two-dimensional polymeric structures parallel to (100). Two C atoms of the spacer are disordered over two positions, with site occupancy factors of ca 0.85 and 0.15.

Entities:  

Year:  2008        PMID: 21202000      PMCID: PMC2960969          DOI: 10.1107/S1600536808006703

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Fan et al. (2005 ▶); Gallardo et al. (2001 ▶, 2004 ▶); Gong et al. (2004 ▶); Mizukami et al. (2005 ▶); Rodríguez-Diéguez et al. (2007 ▶); Wang et al. (2005 ▶).

Experimental

Crystal data

[Zn(C15H14N10)(H2O)2](ClO4)2 M = 969.03 Monoclinic, a = 7.378 (3) Å b = 13.354 (3) Å c = 20.764 (4) Å β = 99.25 (2)° V = 2019.2 (10) Å3 Z = 2 Mo Kα radiation μ = 0.82 mm−1 T = 293 (2) K 0.50 × 0.46 × 0.20 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.682, T max = 0.853 3873 measured reflections 3576 independent reflections 2826 reflections with I > 2σ(I) R int = 0.016 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.097 S = 1.06 3576 reflections 305 parameters 3 restraints H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.41 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: SET4 in CAD-4 EXPRESS; data reduction: HELENA (Spek, 1996 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808006703/bg2168sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808006703/bg2168Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C15H14N10)(H2O)2](ClO4)2F000 = 992
Mr = 969.03Dx = 1.594 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71069 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 7.378 (3) Åθ = 9.6–15.4º
b = 13.354 (3) ŵ = 0.82 mm1
c = 20.764 (4) ÅT = 293 (2) K
β = 99.25 (2)ºPrismatic, colorless
V = 2019.2 (10) Å30.50 × 0.46 × 0.20 mm
Z = 2
Enraf–Nonius CAD-4 diffractometerRint = 0.016
Radiation source: fine-focus sealed tubeθmax = 25.1º
Monochromator: graphiteθmin = 2.5º
T = 293(2) Kh = 0→8
ω–2θ scansk = 0→15
Absorption correction: ψ scan(North et al., 1968)l = −24→24
Tmin = 0.682, Tmax = 0.8533 standard reflections
3873 measured reflections every 200 reflections
3576 independent reflections intensity decay: 1%
2826 reflections with I > 2σ(I)
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.035H-atom parameters constrained
wR(F2) = 0.097  w = 1/[σ2(Fo2) + (0.0463P)2 + 1.2496P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
3576 reflectionsΔρmax = 0.30 e Å3
305 parametersΔρmin = −0.41 e Å3
3 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
xyzUiso*/UeqOcc. (<1)
Zn10.00000.50000.50000.03313 (13)
O1W0.1357 (3)0.37083 (13)0.54150 (8)0.0414 (4)
H1WA0.20790.38210.57790.050*
H1WB0.06300.32240.54790.050*
C10.2499 (4)0.4082 (2)0.26479 (13)0.0525 (8)
H1C0.36100.44740.27630.063*0.848 (8)
H1B0.28570.33870.26180.063*0.848 (8)
H1A'0.37890.40820.28380.063*0.152 (8)
H1B'0.22300.34550.24160.063*0.152 (8)
C20.1502 (6)0.4409 (3)0.19841 (17)0.0478 (12)0.848 (8)
H2A0.03350.40630.18840.057*0.848 (8)
H2B0.22330.42350.16520.057*0.848 (8)
C2'0.212 (2)0.5004 (19)0.2178 (9)0.062 (9)0.152 (8)
H2A'0.30420.49900.18930.075*0.152 (8)
H2B'0.23020.56200.24280.075*0.152 (8)
C30.1192 (7)0.5522 (3)0.19766 (16)0.0473 (11)0.848 (8)
H3A0.02210.56800.22240.057*0.848 (8)
H3B0.22990.58650.21770.057*0.848 (8)
C3'0.031 (2)0.5010 (16)0.1744 (9)0.048 (6)0.152 (8)
H3A'−0.00170.43820.15210.058*0.152 (8)
H3B'−0.06400.51980.19940.058*0.152 (8)
C10−0.2250 (3)0.36570 (18)0.40158 (11)0.0336 (5)
N11−0.2337 (3)0.40794 (15)0.46025 (9)0.0330 (5)
C12−0.3779 (4)0.3837 (2)0.48910 (13)0.0407 (6)
H12−0.38800.41290.52900.049*
C13−0.5122 (4)0.3170 (2)0.46167 (15)0.0488 (7)
H13−0.60990.30130.48310.059*
C14−0.4989 (4)0.2741 (2)0.40210 (15)0.0505 (7)
H14−0.58690.22850.38310.061*
C15−0.3538 (4)0.2996 (2)0.37130 (13)0.0433 (6)
H15−0.34320.27270.33080.052*
C16−0.0630 (3)0.39652 (18)0.37349 (11)0.0333 (5)
N170.0622 (3)0.45884 (16)0.40591 (10)0.0351 (5)
N180.1900 (3)0.47270 (17)0.36914 (10)0.0404 (5)
N190.1370 (3)0.41780 (17)0.31670 (10)0.0395 (5)
N20−0.0198 (3)0.36842 (17)0.31667 (10)0.0414 (5)
C200.1645 (4)0.6352 (2)−0.02723 (13)0.0393 (6)
N210.1096 (3)0.71610 (16)−0.06368 (11)0.0429 (5)
C220.1892 (4)0.7317 (2)−0.11638 (14)0.0534 (8)
H220.15360.7876−0.14200.064*
C230.3205 (5)0.6698 (3)−0.13475 (16)0.0654 (9)
H230.37410.6845−0.17120.078*
C240.3713 (5)0.5852 (3)−0.09787 (17)0.0697 (10)
H240.45730.5409−0.10980.084*
C250.2923 (4)0.5676 (2)−0.04327 (15)0.0552 (8)
H250.32420.5113−0.01760.066*
C260.0884 (4)0.62351 (19)0.03362 (13)0.0394 (6)
N27−0.0628 (3)0.66990 (18)0.04770 (12)0.0485 (6)
N28−0.0761 (4)0.64443 (19)0.10824 (12)0.0540 (6)
N290.0649 (4)0.58592 (19)0.12805 (12)0.0539 (6)
N300.1722 (3)0.56958 (19)0.08358 (11)0.0513 (6)
Cl10.34362 (10)0.38846 (6)0.71439 (3)0.0497 (2)
O110.3975 (4)0.4197 (2)0.65481 (12)0.0874 (8)
O120.4636 (4)0.3152 (2)0.74296 (16)0.1075 (11)
O130.1623 (4)0.3525 (3)0.70176 (15)0.1099 (11)
O140.3557 (5)0.4722 (3)0.75703 (19)0.1274 (13)
U11U22U33U12U13U23
Zn10.0396 (2)0.0337 (2)0.0263 (2)−0.00564 (18)0.00595 (16)−0.00305 (17)
O1W0.0500 (11)0.0362 (10)0.0370 (10)−0.0037 (8)0.0033 (8)0.0006 (8)
C10.0586 (18)0.066 (2)0.0379 (15)0.0157 (16)0.0229 (14)0.0050 (14)
C20.067 (3)0.048 (2)0.0299 (19)−0.006 (2)0.0123 (19)−0.0028 (16)
C2'0.028 (10)0.13 (3)0.028 (10)0.024 (15)0.012 (8)0.024 (15)
C30.061 (3)0.050 (2)0.0314 (19)0.004 (2)0.0107 (19)−0.0017 (16)
C3'0.038 (11)0.067 (15)0.042 (11)0.008 (11)0.009 (9)0.025 (11)
C100.0382 (14)0.0300 (13)0.0308 (12)0.0017 (11)0.0003 (10)0.0012 (10)
N110.0355 (11)0.0312 (11)0.0319 (11)−0.0005 (9)0.0043 (9)0.0027 (9)
C120.0395 (14)0.0410 (15)0.0422 (14)0.0031 (12)0.0087 (12)0.0041 (12)
C130.0338 (14)0.0504 (17)0.0623 (19)−0.0011 (13)0.0082 (13)0.0105 (15)
C140.0404 (15)0.0460 (17)0.0608 (19)−0.0081 (13)−0.0045 (14)−0.0024 (14)
C150.0445 (15)0.0411 (15)0.0420 (15)−0.0022 (12)0.0000 (12)−0.0062 (12)
C160.0401 (14)0.0293 (12)0.0294 (12)0.0008 (11)0.0026 (11)0.0015 (10)
N170.0405 (12)0.0364 (11)0.0295 (11)−0.0032 (10)0.0088 (9)0.0005 (9)
N180.0467 (13)0.0425 (13)0.0332 (12)0.0003 (10)0.0102 (10)0.0000 (9)
N190.0478 (13)0.0429 (12)0.0291 (11)0.0050 (11)0.0099 (10)0.0025 (9)
N200.0505 (14)0.0447 (13)0.0287 (11)0.0032 (11)0.0060 (10)−0.0049 (10)
C200.0429 (15)0.0370 (14)0.0373 (14)−0.0021 (12)0.0045 (12)0.0000 (11)
N210.0537 (14)0.0359 (12)0.0386 (12)−0.0020 (11)0.0054 (11)0.0000 (10)
C220.067 (2)0.0500 (18)0.0426 (16)−0.0033 (15)0.0075 (15)0.0075 (14)
C230.069 (2)0.086 (3)0.0469 (17)−0.0004 (19)0.0247 (16)0.0100 (18)
C240.068 (2)0.081 (2)0.066 (2)0.0221 (19)0.0282 (18)0.0054 (19)
C250.0602 (19)0.0541 (19)0.0534 (18)0.0129 (16)0.0153 (15)0.0094 (15)
C260.0448 (15)0.0314 (14)0.0418 (15)0.0009 (12)0.0066 (12)−0.0003 (11)
N270.0533 (15)0.0432 (13)0.0511 (14)0.0121 (11)0.0145 (12)0.0072 (11)
N280.0587 (16)0.0535 (15)0.0535 (15)0.0171 (13)0.0207 (13)0.0091 (12)
N290.0618 (16)0.0559 (15)0.0484 (14)0.0193 (13)0.0228 (12)0.0112 (12)
N300.0565 (15)0.0568 (15)0.0440 (13)0.0168 (12)0.0189 (12)0.0100 (12)
Cl10.0474 (4)0.0528 (4)0.0465 (4)0.0002 (3)0.0006 (3)0.0051 (3)
O110.0928 (19)0.109 (2)0.0586 (15)−0.0223 (17)0.0069 (14)0.0235 (15)
O120.104 (2)0.095 (2)0.113 (2)0.0239 (18)−0.0123 (19)0.0464 (19)
O130.0612 (17)0.168 (3)0.098 (2)−0.0375 (19)0.0047 (15)−0.009 (2)
O140.141 (3)0.111 (2)0.137 (3)−0.016 (2)0.042 (3)−0.068 (2)
Zn1—O1Wi2.1079 (18)C12—H120.9300
Zn1—O1W2.1079 (18)C13—C141.381 (4)
Zn1—N17i2.149 (2)C13—H130.9300
Zn1—N172.149 (2)C14—C151.375 (4)
Zn1—N11i2.170 (2)C14—H140.9300
Zn1—N112.170 (2)C15—H150.9300
O1W—H1WA0.8646C16—N201.325 (3)
O1W—H1WB0.8638C16—N171.341 (3)
C1—N191.470 (3)N17—N181.319 (3)
C1—C21.519 (4)N18—N191.319 (3)
C1—C2'1.569 (17)N19—N201.331 (3)
C1—H1C0.9700C20—N211.343 (3)
C1—H1B0.9700C20—C251.385 (4)
C1—H1A'0.9700C20—C261.471 (4)
C1—H1B'0.9700N21—C221.339 (4)
C2—C31.503 (5)C22—C231.373 (5)
C2—H2A0.9700C22—H220.9300
C2—H2B0.9699C23—C241.383 (5)
C2'—C3'1.485 (17)C23—H230.9300
C2'—H2A'0.9700C24—C251.375 (4)
C2'—H2B'0.9700C24—H240.9300
C3—N291.505 (4)C25—H250.9300
C3—H3A0.9701C26—N301.331 (3)
C3—H3B0.9700C26—N271.348 (3)
C3'—N291.534 (14)N27—N281.321 (3)
C3'—H3A'0.9699N28—N291.313 (3)
C3'—H3B'0.9700N29—N301.327 (3)
C10—N111.353 (3)Cl1—O121.387 (3)
C10—C151.373 (4)Cl1—O131.406 (3)
C10—C161.470 (3)Cl1—O141.420 (3)
N11—C121.342 (3)Cl1—O111.421 (3)
C12—C131.385 (4)
O1Wi—Zn1—O1W180.00 (9)C10—N11—Zn1115.41 (16)
O1Wi—Zn1—N17i90.32 (8)N11—C12—C13122.5 (3)
O1W—Zn1—N17i89.68 (8)N11—C12—H12118.7
O1Wi—Zn1—N1789.68 (8)C13—C12—H12118.7
O1W—Zn1—N1790.32 (8)C14—C13—C12119.1 (3)
N17i—Zn1—N17180.00 (4)C14—C13—H13120.5
O1Wi—Zn1—N11i89.32 (8)C12—C13—H13120.5
O1W—Zn1—N11i90.68 (8)C15—C14—C13119.1 (3)
N17i—Zn1—N11i77.40 (8)C15—C14—H14120.5
N17—Zn1—N11i102.60 (8)C13—C14—H14120.5
O1Wi—Zn1—N1190.68 (8)C10—C15—C14118.7 (3)
O1W—Zn1—N1189.32 (8)C10—C15—H15120.7
N17i—Zn1—N11102.60 (8)C14—C15—H15120.7
N17—Zn1—N1177.40 (8)N20—C16—N17112.2 (2)
N11i—Zn1—N11180.00 (9)N20—C16—C10127.0 (2)
Zn1—O1W—H1WA113.6N17—C16—C10120.9 (2)
Zn1—O1W—H1WB114.1N18—N17—C16107.2 (2)
H1WA—O1W—H1WB107.9N18—N17—Zn1140.15 (17)
N19—C1—C2113.0 (3)C16—N17—Zn1112.61 (16)
N19—C1—C2'108.8 (8)N17—N18—N19104.8 (2)
N19—C1—H1C109.1N18—N19—N20114.7 (2)
C2—C1—H1C109.6N18—N19—C1121.8 (2)
N19—C1—H1B108.9N20—N19—C1123.4 (2)
C2—C1—H1B108.3C16—N20—N19101.1 (2)
H1C—C1—H1B107.8N21—C20—C25123.0 (3)
N19—C1—H1A'109.6N21—C20—C26116.6 (2)
C2'—C1—H1A'108.6C25—C20—C26120.4 (2)
C2'—C1—H1B'111.6C22—N21—C20116.9 (2)
H1A'—C1—H1B'108.1N21—C22—C23123.8 (3)
C3—C2—C1110.2 (3)N21—C22—H22118.1
C3—C2—H2A109.9C23—C22—H22118.1
C1—C2—H2A110.0C22—C23—C24118.6 (3)
C3—C2—H2B109.3C22—C23—H23120.7
C1—C2—H2B109.4C24—C23—H23120.7
H2A—C2—H2B108.0C25—C24—C23118.9 (3)
C3'—C2'—C1115.7 (15)C25—C24—H24120.6
C3'—C2'—H2A'106.3C23—C24—H24120.6
C1—C2'—H2A'106.9C24—C25—C20118.8 (3)
C3'—C2'—H2B'110.7C24—C25—H25120.6
C1—C2'—H2B'109.7C20—C25—H25120.6
H2A'—C2'—H2B'107.1N30—C26—N27112.1 (2)
C2—C3—N29108.8 (3)N30—C26—C20122.2 (2)
C2—C3—H3A109.5N27—C26—C20125.5 (2)
N29—C3—H3A109.8N28—N27—C26106.2 (2)
C2—C3—H3B110.3N29—N28—N27106.0 (2)
N29—C3—H3B110.2N28—N29—N30114.3 (2)
H3A—C3—H3B108.2N28—N29—C3123.6 (3)
C2'—C3'—N2999.4 (12)N30—N29—C3121.5 (3)
C2'—C3'—H3A'114.6N28—N29—C3'115.9 (7)
N29—C3'—H3A'113.1N30—N29—C3'119.4 (9)
C2'—C3'—H3B'109.5N29—N30—C26101.5 (2)
N29—C3'—H3B'110.4O12—Cl1—O13111.2 (2)
H3A'—C3'—H3B'109.4O12—Cl1—O14108.5 (2)
N11—C10—C15123.4 (2)O13—Cl1—O14110.3 (2)
N11—C10—C16113.5 (2)O12—Cl1—O11109.3 (2)
C15—C10—C16123.0 (2)O13—Cl1—O11109.19 (18)
C12—N11—C10117.2 (2)O14—Cl1—O11108.3 (2)
C12—N11—Zn1127.24 (17)
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O110.862.012.869 (3)172
O1W—H1WB···N21ii0.861.972.833 (3)178
Table 1

Selected bond lengths (Å)

Zn1—O1W2.1079 (18)
Zn1—N172.149 (2)
Zn1—N112.170 (2)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O110.862.012.869 (3)172
O1W—H1WB⋯N21i0.861.972.833 (3)178

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Syntheses, crystal structures, and luminescent properties of three novel zinc coordination polymers with tetrazolyl ligands.

Authors:  Xi-Sen Wang; Yun-Zhi Tang; Xue-Feng Huang; Zhi-Rong Qu; Chi-Ming Che; Philip Wai Hong Chan; Ren-Gen Xiong
Journal:  Inorg Chem       Date:  2005-07-25       Impact factor: 5.165

3.  Synthesis, X-ray structures and luminescence properties of three multidimensional metal-organic frameworks incorporating the versatile 5-(pyrimidyl)tetrazolato bridging ligand.

Authors:  A Rodríguez-Diéguez; A Salinas-Castillo; S Galli; N Masciocchi; J M Gutiérrez-Zorrilla; P Vitoria; E Colacio
Journal:  Dalton Trans       Date:  2007-03-21       Impact factor: 4.390

  3 in total
  1 in total

1.  Structural characterization of two benzene-1,2-di-amine complexes of zinc chloride: a mol-ecular compound and a co-crystal salt.

Authors:  Patricia L Zick; David K Geiger
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2016-06-24
  1 in total

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