Literature DB >> 21201999

Tetra-kis[3-(2-pyridylamino)pyridine-κN]nickel(II) diperchlorate ethanol disolvate.

Zhi-Min Wang1.   

Abstract

In the title compound, [Ni(C(10)H(9)N(3))(4)](ClO(4))(2)·2C(2)H(5)OH, the metal centre exhibits a four-coordinated environment with four pyridine N atoms of the four different dipyridylamine ligands. A twofold rotation axis passes through the Ni atom. N-H⋯O and N-H⋯N hydrogen bonds are present in the crystal structure.

Entities:  

Year:  2008        PMID: 21201999      PMCID: PMC2961010          DOI: 10.1107/S1600536808006569

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Moulton & Zaworotko (2001 ▶); Su et al. (2003 ▶); Zhou et al. (2006 ▶); Biradha et al. (1999 ▶); Gudbjartson et al. (1999 ▶).

Experimental

Crystal data

[Ni(C10H9N3)4](ClO4)2·2C2H6O M = 1034.55 Monoclinic, a = 27.767 (4) Å b = 10.7067 (14) Å c = 18.144 (2) Å β = 115.891 (9)° V = 4852.6 (11) Å3 Z = 4 Mo Kα radiation μ = 0.58 mm−1 T = 298 (2) K 0.32 × 0.22 × 0.17 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.836, T max = 0.908 11042 measured reflections 4315 independent reflections 2875 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.134 S = 1.08 4315 reflections 314 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.36 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808006569/at2548sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808006569/at2548Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C10H9N3)4](ClO4)2·2C2H6OF000 = 2152
Mr = 1034.55Dx = 1.416 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 4315 reflections
a = 27.767 (4) Åθ = 1.6–25.1º
b = 10.7067 (14) ŵ = 0.58 mm1
c = 18.144 (2) ÅT = 298 (2) K
β = 115.891 (9)ºBlock, green
V = 4852.6 (11) Å30.32 × 0.22 × 0.17 mm
Z = 4
Bruker APEXII area-detector diffractometer4315 independent reflections
Radiation source: fine-focus sealed tube2875 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.044
T = 298(2) Kθmax = 25.1º
φ and ω scansθmin = 1.6º
Absorption correction: multi-scan(SADABS; Sheldrick, 2004)h = −33→33
Tmin = 0.836, Tmax = 0.908k = −12→12
11042 measured reflectionsl = −21→21
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.048H-atom parameters constrained
wR(F2) = 0.134  w = 1/[σ2(Fo2) + (0.0501P)2 + 1.1196P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max = 0.084
4315 reflectionsΔρmax = 0.35 e Å3
314 parametersΔρmin = −0.36 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.50000.23720 (5)0.75000.0397 (2)
N10.54118 (10)0.1032 (2)0.72421 (16)0.0455 (6)
N20.60983 (11)−0.1938 (3)0.80972 (17)0.0586 (8)
H20.6337−0.23490.80160.070*
N30.56191 (11)−0.1786 (3)0.88745 (18)0.0577 (7)
N40.54239 (10)0.3700 (2)0.72509 (16)0.0438 (6)
N50.68140 (10)0.4606 (3)0.79766 (17)0.0550 (7)
H5B0.69450.39230.82370.066*
N60.69860 (11)0.6684 (3)0.77848 (18)0.0574 (7)
C10.56303 (12)0.0085 (3)0.77601 (19)0.0456 (8)
H10.56210.01040.82670.055*
C20.58706 (13)−0.0930 (3)0.7574 (2)0.0474 (8)
C30.58891 (14)−0.0912 (3)0.6822 (2)0.0547 (9)
H30.6051−0.15660.66770.066*
C40.56711 (14)0.0061 (3)0.6297 (2)0.0565 (9)
H40.56840.00730.57940.068*
C50.54302 (13)0.1029 (3)0.6514 (2)0.0515 (8)
H50.52790.16870.61520.062*
C60.59913 (15)−0.2364 (3)0.8729 (2)0.0544 (9)
C70.62701 (16)−0.3403 (4)0.9173 (2)0.0682 (11)
H70.6529−0.37910.90580.082*
C80.61504 (17)−0.3838 (4)0.9787 (2)0.0757 (11)
H80.6324−0.45401.00890.091*
C90.57742 (17)−0.3231 (4)0.9951 (2)0.0720 (11)
H90.5692−0.35021.03690.086*
C100.55247 (15)−0.2224 (4)0.9489 (2)0.0643 (10)
H100.5272−0.18120.96060.077*
C110.59564 (12)0.3773 (3)0.76688 (19)0.0437 (7)
H110.61270.32290.81060.052*
C120.62665 (12)0.4614 (3)0.74861 (19)0.0426 (7)
C130.60115 (12)0.5367 (3)0.6812 (2)0.0477 (8)
H130.62080.59040.66450.057*
C140.54629 (13)0.5316 (3)0.6387 (2)0.0525 (8)
H140.52850.58410.59420.063*
C150.51777 (13)0.4489 (3)0.6622 (2)0.0515 (8)
H150.48060.44750.63390.062*
C160.71742 (12)0.5563 (3)0.8097 (2)0.0480 (8)
C170.77153 (13)0.5330 (4)0.8563 (2)0.0653 (10)
H170.78350.45420.87840.078*
C180.80698 (16)0.6289 (5)0.8690 (3)0.0827 (13)
H180.84340.61630.90070.099*
C190.78839 (18)0.7437 (4)0.8349 (3)0.0815 (13)
H190.81180.80940.84150.098*
C200.73503 (16)0.7584 (4)0.7913 (3)0.0701 (11)
H200.72260.83660.76860.084*
Cl10.39899 (4)0.22782 (8)0.51603 (5)0.0580 (3)
O10.42456 (13)0.2385 (3)0.60132 (16)0.0903 (10)
O20.43498 (15)0.2706 (3)0.4854 (2)0.1180 (13)
O30.38628 (16)0.1017 (3)0.4956 (2)0.1268 (14)
O40.35263 (17)0.2973 (5)0.4863 (4)0.196 (2)
O50.7269 (3)0.2376 (3)0.8974 (3)0.166 (2)
H5A0.70750.25710.91900.249*
C210.7270 (3)0.0252 (6)0.9344 (4)0.143 (2)
H21A0.75320.05530.98630.215*
H21B0.7396−0.05060.92060.215*
H21C0.69400.00940.93780.215*
C220.7186 (3)0.1150 (6)0.8741 (4)0.151 (3)
H22A0.74160.09480.84820.181*
H22B0.68190.10680.83270.181*
U11U22U33U12U13U23
Ni10.0470 (3)0.0271 (3)0.0562 (4)0.0000.0329 (3)0.000
N10.0539 (16)0.0367 (15)0.0564 (16)0.0018 (12)0.0340 (14)0.0022 (13)
N20.070 (2)0.0493 (17)0.0644 (19)0.0226 (15)0.0365 (17)0.0081 (15)
N30.0660 (19)0.0489 (18)0.0645 (19)0.0046 (14)0.0344 (17)0.0068 (15)
N40.0470 (16)0.0328 (14)0.0556 (16)0.0043 (12)0.0261 (14)0.0038 (13)
N50.0428 (16)0.0420 (16)0.071 (2)0.0045 (12)0.0166 (15)0.0154 (14)
N60.0506 (17)0.0438 (18)0.073 (2)−0.0016 (14)0.0221 (16)0.0044 (15)
C10.057 (2)0.0342 (17)0.0531 (19)0.0017 (15)0.0311 (17)0.0019 (16)
C20.0508 (19)0.0390 (18)0.058 (2)0.0035 (15)0.0285 (17)−0.0007 (16)
C30.065 (2)0.046 (2)0.064 (2)0.0063 (17)0.0384 (19)−0.0056 (18)
C40.072 (2)0.052 (2)0.059 (2)0.0061 (18)0.041 (2)0.0009 (18)
C50.063 (2)0.046 (2)0.058 (2)0.0033 (16)0.0376 (18)0.0063 (17)
C60.061 (2)0.044 (2)0.054 (2)0.0017 (17)0.0212 (18)−0.0013 (17)
C70.079 (3)0.054 (2)0.068 (3)0.017 (2)0.029 (2)0.011 (2)
C80.086 (3)0.056 (3)0.065 (3)0.003 (2)0.014 (2)0.012 (2)
C90.075 (3)0.075 (3)0.059 (2)−0.012 (2)0.023 (2)0.014 (2)
C100.061 (2)0.069 (3)0.065 (2)−0.0037 (19)0.029 (2)0.006 (2)
C110.045 (2)0.0372 (18)0.0494 (19)0.0069 (14)0.0213 (16)0.0081 (15)
C120.0455 (18)0.0325 (16)0.0498 (18)0.0019 (13)0.0208 (16)0.0001 (14)
C130.051 (2)0.0383 (18)0.054 (2)−0.0073 (15)0.0230 (17)0.0052 (16)
C140.048 (2)0.0414 (19)0.057 (2)−0.0002 (15)0.0123 (17)0.0124 (16)
C150.0446 (19)0.0412 (19)0.063 (2)−0.0004 (15)0.0184 (17)0.0032 (17)
C160.0405 (18)0.047 (2)0.056 (2)−0.0021 (15)0.0204 (16)−0.0038 (16)
C170.043 (2)0.061 (2)0.079 (3)0.0068 (17)0.0141 (19)0.003 (2)
C180.043 (2)0.095 (4)0.101 (3)−0.008 (2)0.024 (2)−0.006 (3)
C190.064 (3)0.077 (3)0.096 (3)−0.026 (2)0.029 (3)−0.005 (3)
C200.067 (3)0.054 (2)0.078 (3)−0.0135 (19)0.022 (2)0.006 (2)
Cl10.0655 (6)0.0541 (6)0.0529 (5)−0.0062 (4)0.0243 (5)−0.0040 (4)
O10.104 (2)0.120 (3)0.0521 (16)−0.0282 (18)0.0392 (17)−0.0173 (15)
O20.150 (3)0.146 (3)0.084 (2)−0.053 (2)0.076 (2)0.000 (2)
O30.183 (4)0.082 (2)0.152 (3)−0.060 (2)0.106 (3)−0.062 (2)
O40.095 (3)0.162 (4)0.274 (6)0.057 (3)0.026 (4)0.053 (4)
O50.221 (6)0.067 (2)0.128 (4)0.010 (3)0.001 (3)0.019 (2)
C210.189 (7)0.092 (4)0.147 (6)−0.001 (4)0.072 (5)0.004 (4)
C220.187 (7)0.080 (4)0.129 (5)−0.028 (4)0.017 (5)0.013 (4)
Ni1—N1i2.013 (2)C9—C101.356 (5)
Ni1—N12.013 (2)C9—H90.9300
Ni1—N42.019 (2)C10—H100.9300
Ni1—N4i2.019 (2)C11—C121.382 (4)
N1—C11.335 (4)C11—H110.9300
N1—C51.344 (4)C12—C131.375 (4)
N2—C61.382 (4)C13—C141.375 (4)
N2—C21.393 (4)C13—H130.9300
N2—H20.8600C14—C151.373 (4)
N3—C61.326 (4)C14—H140.9300
N3—C101.336 (4)C15—H150.9300
N4—C111.337 (4)C16—C171.388 (5)
N4—C151.342 (4)C17—C181.371 (5)
N5—C161.381 (4)C17—H170.9300
N5—C121.386 (4)C18—C191.371 (6)
N5—H5B0.8600C18—H180.9300
N6—C161.332 (4)C19—C201.350 (6)
N6—C201.342 (4)C19—H190.9300
C1—C21.392 (4)C20—H200.9300
C1—H10.9300Cl1—O41.377 (4)
C2—C31.388 (4)Cl1—O11.397 (3)
C3—C41.362 (5)Cl1—O31.404 (3)
C3—H30.9300Cl1—O21.415 (3)
C4—C51.381 (4)O5—C221.368 (6)
C4—H40.9300O5—H5A0.8200
C5—H50.9300C21—C221.397 (7)
C6—C71.394 (5)C21—H21A0.9600
C7—C81.376 (5)C21—H21B0.9600
C7—H70.9300C21—H21C0.9600
C8—C91.369 (5)C22—H22A0.9700
C8—H80.9300C22—H22B0.9700
N1i—Ni1—N189.08 (14)N4—C11—C12123.5 (3)
N1i—Ni1—N4179.09 (11)N4—C11—H11118.2
N1—Ni1—N490.24 (10)C12—C11—H11118.2
N1i—Ni1—N4i90.24 (10)C13—C12—C11117.5 (3)
N1—Ni1—N4i179.09 (11)C13—C12—N5124.7 (3)
N4—Ni1—N4i90.44 (13)C11—C12—N5117.7 (3)
C1—N1—C5119.3 (3)C12—C13—C14119.3 (3)
C1—N1—Ni1120.49 (19)C12—C13—H13120.4
C5—N1—Ni1120.0 (2)C14—C13—H13120.4
C6—N2—C2128.5 (3)C15—C14—C13120.0 (3)
C6—N2—H2115.7C15—C14—H14120.0
C2—N2—H2115.7C13—C14—H14120.0
C6—N3—C10117.1 (3)N4—C15—C14121.4 (3)
C11—N4—C15118.2 (3)N4—C15—H15119.3
C11—N4—Ni1121.5 (2)C14—C15—H15119.3
C15—N4—Ni1120.2 (2)N6—C16—N5118.6 (3)
C16—N5—C12127.8 (3)N6—C16—C17122.7 (3)
C16—N5—H5B116.1N5—C16—C17118.7 (3)
C12—N5—H5B116.1C18—C17—C16118.4 (4)
C16—N6—C20116.6 (3)C18—C17—H17120.8
N1—C1—C2122.8 (3)C16—C17—H17120.8
N1—C1—H1118.6C17—C18—C19119.6 (4)
C2—C1—H1118.6C17—C18—H18120.2
C3—C2—C1117.0 (3)C19—C18—H18120.2
C3—C2—N2118.7 (3)C20—C19—C18118.0 (4)
C1—C2—N2124.3 (3)C20—C19—H19121.0
C4—C3—C2120.2 (3)C18—C19—H19121.0
C4—C3—H3119.9N6—C20—C19124.7 (4)
C2—C3—H3119.9N6—C20—H20117.7
C3—C4—C5119.8 (3)C19—C20—H20117.7
C3—C4—H4120.1O4—Cl1—O1109.0 (3)
C5—C4—H4120.1O4—Cl1—O3109.4 (3)
N1—C5—C4120.9 (3)O1—Cl1—O3108.6 (2)
N1—C5—H5119.6O4—Cl1—O2111.8 (3)
C4—C5—H5119.6O1—Cl1—O2107.7 (2)
N3—C6—N2118.7 (3)O3—Cl1—O2110.3 (2)
N3—C6—C7122.8 (3)C22—O5—H5A109.5
N2—C6—C7118.5 (3)C22—C21—H21A109.5
C8—C7—C6118.0 (4)C22—C21—H21B109.5
C8—C7—H7121.0H21A—C21—H21B109.5
C6—C7—H7121.0C22—C21—H21C109.5
C9—C8—C7119.5 (4)H21A—C21—H21C109.5
C9—C8—H8120.3H21B—C21—H21C109.5
C7—C8—H8120.3O5—C22—C21118.1 (6)
C10—C9—C8118.4 (4)O5—C22—H22A107.8
C10—C9—H9120.8C21—C22—H22A107.8
C8—C9—H9120.8O5—C22—H22B107.8
N3—C10—C9124.2 (4)C21—C22—H22B107.8
N3—C10—H10117.9H22A—C22—H22B107.1
C9—C10—H10117.9
N1i—Ni1—N1—C1−48.8 (2)C6—C7—C8—C9−1.2 (6)
N4—Ni1—N1—C1130.6 (2)C7—C8—C9—C101.0 (6)
N1i—Ni1—N1—C5125.6 (3)C6—N3—C10—C9−1.8 (6)
N4—Ni1—N1—C5−55.0 (3)C8—C9—C10—N30.5 (6)
N1—Ni1—N4—C11−59.8 (2)C15—N4—C11—C12−0.2 (4)
N4i—Ni1—N4—C11120.8 (3)Ni1—N4—C11—C12175.7 (2)
N1—Ni1—N4—C15116.0 (2)N4—C11—C12—C13−3.4 (4)
N4i—Ni1—N4—C15−63.4 (2)N4—C11—C12—N5179.0 (3)
C5—N1—C1—C2−1.2 (5)C16—N5—C12—C1325.5 (5)
Ni1—N1—C1—C2173.2 (2)C16—N5—C12—C11−157.0 (3)
N1—C1—C2—C31.7 (5)C11—C12—C13—C144.5 (4)
N1—C1—C2—N2−179.5 (3)N5—C12—C13—C14−178.0 (3)
C6—N2—C2—C3−157.8 (3)C12—C13—C14—C15−2.2 (5)
C6—N2—C2—C123.3 (6)C11—N4—C15—C142.7 (4)
C1—C2—C3—C4−0.9 (5)Ni1—N4—C15—C14−173.3 (2)
N2—C2—C3—C4−179.9 (3)C13—C14—C15—N4−1.5 (5)
C2—C3—C4—C5−0.2 (5)C20—N6—C16—N5−179.7 (3)
C1—N1—C5—C40.0 (5)C20—N6—C16—C172.8 (5)
Ni1—N1—C5—C4−174.4 (2)C12—N5—C16—N67.6 (5)
C3—C4—C5—N10.6 (5)C12—N5—C16—C17−174.8 (3)
C10—N3—C6—N2179.8 (3)N6—C16—C17—C18−1.5 (5)
C10—N3—C6—C71.5 (5)N5—C16—C17—C18−179.0 (3)
C2—N2—C6—N31.4 (6)C16—C17—C18—C19−0.9 (6)
C2—N2—C6—C7179.8 (3)C17—C18—C19—C201.8 (7)
N3—C6—C7—C8−0.1 (6)C16—N6—C20—C19−1.9 (6)
N2—C6—C7—C8−178.4 (3)C18—C19—C20—N6−0.4 (7)
D—H···AD—HH···AD···AD—H···A
N5—H5B···O50.862.072.928 (5)174
N2—H2···N6ii0.862.273.129 (4)176
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N5—H5B⋯O50.862.072.928 (5)174
N2—H2⋯N6i0.862.273.129 (4)176

Symmetry code: (i) .

  3 in total

1.  From molecules to crystal engineering: supramolecular isomerism and polymorphism in network solids.

Authors:  B Moulton; M J Zaworotko
Journal:  Chem Rev       Date:  2001-06       Impact factor: 60.622

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Ligand-directed molecular architectures: self-assembly of two-dimensional rectangular metallacycles and three-dimensional trigonal or tetragonal prisms.

Authors:  Cheng-Yong Su; Yue-Peng Cai; Chun-Long Chen; Mark D Smith; Wolfgang Kaim; Hans-Conrad zur Loye
Journal:  J Am Chem Soc       Date:  2003-07-16       Impact factor: 15.419

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.