| Literature DB >> 21201933 |
Mark A Rodriguez, Thomas Zifer, Andrew L Vance, Bryan M Wong, Francois Leonard.
Abstract
The crystal structure of the title compound, C(31)H(26)N(4)O(4), displays a trans conformation for the nitro-phenyl-diazenyl portion of the mol-ecule. Packing diagrams indicate that weak C-H⋯O hydrogen bonds, likely associated with a strong dipole moment present in the mol-ecule, dictate the arrangement of mol-ecules in the crystal structure.Entities:
Year: 2008 PMID: 21201933 PMCID: PMC2960836 DOI: 10.1107/S1600536808004108
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C31H26N4O4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 100 reflections | |
| θ = 1.6–26.0º | |
| µ = 0.09 mm−1 | |
| α = 101.134 (3)º | |
| β = 104.667 (4)º | Irregular, orange |
| γ = 99.779 (3)º | 0.20 × 0.08 × 0.06 mm |
| Bruker SMART CCD area-detector diffractometer | 4824 independent reflections |
| Radiation source: fine-focus sealed tube | 2786 reflections with |
| Monochromator: graphite | |
| Detector resolution: 0 pixels mm-1 | θmax = 26.0º |
| θmin = 1.6º | |
| phi and ω scans | |
| Absorption correction: multi-scan(SADABS; Sheldrick, 1999) | |
| 9650 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max = 0.001 | |
| 4824 reflections | Δρmax = 0.21 e Å−3 |
| 353 parameters | Δρmin = −0.21 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.4311 (4) | 0.4301 (3) | 1.1818 (2) | 0.0357 (8) | |
| H1 | 0.3552 | 0.3878 | 1.1167 | 0.043* | |
| C2 | 0.3871 (4) | 0.4647 (3) | 1.2740 (2) | 0.0380 (8) | |
| H2 | 0.2823 | 0.4455 | 1.2705 | 0.046* | |
| C3 | 0.5796 (3) | 0.4565 (3) | 1.1849 (2) | 0.0314 (8) | |
| H3 | 0.6066 | 0.4332 | 1.1218 | 0.038* | |
| C4 | 0.4936 (3) | 0.5249 (3) | 1.3672 (2) | 0.0330 (8) | |
| H4 | 0.4624 | 0.5486 | 1.4285 | 0.040* | |
| C5 | 0.6965 (3) | 0.5190 (3) | 1.2820 (2) | 0.0256 (7) | |
| C6 | 0.6513 (3) | 0.5536 (3) | 1.3752 (2) | 0.0267 (7) | |
| C7 | 0.8515 (3) | 0.5491 (3) | 1.2887 (2) | 0.0233 (7) | |
| C8 | 0.7638 (3) | 0.6146 (3) | 1.4708 (2) | 0.0295 (8) | |
| H8 | 0.7339 | 0.6371 | 1.5328 | 0.035* | |
| C9 | 0.9635 (3) | 0.6111 (3) | 1.3845 (2) | 0.0262 (7) | |
| C10 | 0.9183 (3) | 0.6438 (3) | 1.4782 (2) | 0.0271 (7) | |
| C11 | 1.1225 (3) | 0.6452 (3) | 1.3946 (2) | 0.0308 (8) | |
| H11 | 1.1560 | 0.6250 | 1.3339 | 0.037* | |
| C12 | 1.0315 (4) | 0.7073 (3) | 1.5759 (2) | 0.0363 (8) | |
| H12 | 1.0017 | 0.7292 | 1.6380 | 0.044* | |
| C13 | 1.2262 (4) | 0.7058 (3) | 1.4892 (3) | 0.0385 (9) | |
| H13 | 1.3313 | 0.7279 | 1.4938 | 0.046* | |
| C14 | 1.1804 (4) | 0.7369 (3) | 1.5816 (3) | 0.0404 (9) | |
| H14 | 1.2548 | 0.7785 | 1.6476 | 0.049* | |
| C15 | 0.8955 (3) | 0.5179 (3) | 1.1890 (2) | 0.0262 (7) | |
| C16 | 0.9915 (3) | 0.3710 (3) | 1.0822 (2) | 0.0283 (7) | |
| H16A | 1.0823 | 0.4372 | 1.0856 | 0.034* | |
| H16B | 0.9086 | 0.3672 | 1.0185 | 0.034* | |
| C17 | 1.0292 (3) | 0.2372 (3) | 1.0778 (2) | 0.0306 (8) | |
| H17A | 1.1023 | 0.2286 | 1.0364 | 0.037* | |
| H17B | 1.0808 | 0.2334 | 1.1503 | 0.037* | |
| C18 | 0.8293 (4) | 0.0686 (3) | 1.1033 (2) | 0.0326 (8) | |
| H18A | 0.9052 | 0.0919 | 1.1739 | 0.039* | |
| H18B | 0.8035 | −0.0283 | 1.0777 | 0.039* | |
| C19 | 0.6864 (4) | 0.1132 (3) | 1.1141 (2) | 0.0384 (9) | |
| H19A | 0.7124 | 0.2081 | 1.1454 | 0.058* | |
| H19B | 0.6428 | 0.0670 | 1.1595 | 0.058* | |
| H19C | 0.6117 | 0.0934 | 1.0443 | 0.058* | |
| C20 | 0.8434 (3) | 0.0764 (3) | 0.9246 (2) | 0.0252 (7) | |
| C21 | 0.9076 (3) | 0.1361 (3) | 0.8559 (2) | 0.0271 (7) | |
| H21 | 0.9850 | 0.2148 | 0.8846 | 0.032* | |
| C22 | 0.8607 (3) | 0.0830 (3) | 0.7490 (2) | 0.0274 (7) | |
| H22 | 0.9083 | 0.1238 | 0.7053 | 0.033* | |
| C23 | 0.7442 (3) | −0.0300 (3) | 0.7038 (2) | 0.0248 (7) | |
| C24 | 0.6742 (3) | −0.0860 (3) | 0.7695 (2) | 0.0275 (7) | |
| H24 | 0.5922 | −0.1614 | 0.7394 | 0.033* | |
| C25 | 0.7210 (3) | −0.0349 (3) | 0.8769 (2) | 0.0259 (7) | |
| H25 | 0.6704 | −0.0750 | 0.9195 | 0.031* | |
| C26 | 0.6993 (3) | −0.0968 (3) | 0.4302 (2) | 0.0248 (7) | |
| C27 | 0.7983 (3) | −0.1047 (3) | 0.3689 (2) | 0.0271 (7) | |
| H27 | 0.9051 | −0.0733 | 0.4009 | 0.033* | |
| C28 | 0.7414 (3) | −0.1583 (3) | 0.2614 (2) | 0.0270 (7) | |
| H28 | 0.8081 | −0.1663 | 0.2190 | 0.032* | |
| C29 | 0.5850 (3) | −0.1999 (3) | 0.2170 (2) | 0.0255 (7) | |
| C30 | 0.4844 (3) | −0.1891 (3) | 0.2755 (2) | 0.0303 (8) | |
| H30 | 0.3775 | −0.2172 | 0.2427 | 0.036* | |
| C31 | 0.5424 (3) | −0.1365 (3) | 0.3829 (2) | 0.0298 (7) | |
| H31 | 0.4751 | −0.1274 | 0.4246 | 0.036* | |
| N1 | 0.8986 (3) | 0.1256 (2) | 1.03191 (18) | 0.0281 (6) | |
| N2 | 0.6851 (3) | −0.0883 (2) | 0.59401 (18) | 0.0278 (6) | |
| N3 | 0.7671 (3) | −0.0435 (2) | 0.54054 (18) | 0.0281 (6) | |
| N4 | 0.5237 (3) | −0.2560 (2) | 0.10309 (19) | 0.0333 (7) | |
| O1 | 0.9436 (2) | 0.40590 (19) | 1.17640 (14) | 0.0297 (5) | |
| O2 | 0.8885 (3) | 0.5849 (2) | 1.12621 (17) | 0.0432 (6) | |
| O3 | 0.6111 (3) | −0.2485 (2) | 0.04881 (16) | 0.0490 (7) | |
| O4 | 0.3869 (3) | −0.3075 (2) | 0.06570 (16) | 0.0461 (6) |
| C1 | 0.030 (2) | 0.0329 (19) | 0.036 (2) | 0.0005 (16) | 0.0081 (16) | −0.0016 (16) |
| C2 | 0.030 (2) | 0.035 (2) | 0.046 (2) | 0.0021 (16) | 0.0162 (17) | 0.0015 (17) |
| C3 | 0.036 (2) | 0.0261 (18) | 0.0289 (18) | 0.0055 (15) | 0.0106 (16) | −0.0005 (14) |
| C4 | 0.036 (2) | 0.0326 (19) | 0.035 (2) | 0.0098 (16) | 0.0191 (17) | 0.0063 (16) |
| C5 | 0.0308 (19) | 0.0178 (16) | 0.0267 (18) | 0.0049 (14) | 0.0099 (15) | 0.0010 (13) |
| C6 | 0.0305 (19) | 0.0233 (17) | 0.0282 (18) | 0.0062 (14) | 0.0133 (15) | 0.0046 (14) |
| C7 | 0.0281 (18) | 0.0186 (16) | 0.0264 (17) | 0.0059 (13) | 0.0135 (14) | 0.0054 (13) |
| C8 | 0.040 (2) | 0.0282 (18) | 0.0238 (17) | 0.0098 (15) | 0.0150 (16) | 0.0049 (14) |
| C9 | 0.0315 (19) | 0.0203 (16) | 0.0285 (18) | 0.0071 (14) | 0.0084 (15) | 0.0096 (14) |
| C10 | 0.0320 (19) | 0.0227 (17) | 0.0256 (18) | 0.0058 (14) | 0.0084 (15) | 0.0045 (14) |
| C11 | 0.0299 (19) | 0.0324 (19) | 0.0326 (19) | 0.0089 (15) | 0.0110 (16) | 0.0100 (15) |
| C12 | 0.043 (2) | 0.036 (2) | 0.0251 (18) | 0.0072 (17) | 0.0068 (16) | 0.0028 (15) |
| C13 | 0.029 (2) | 0.036 (2) | 0.047 (2) | 0.0041 (16) | 0.0076 (17) | 0.0102 (17) |
| C14 | 0.044 (2) | 0.035 (2) | 0.032 (2) | 0.0020 (17) | 0.0012 (17) | 0.0036 (16) |
| C15 | 0.0232 (18) | 0.0212 (17) | 0.0312 (19) | 0.0026 (14) | 0.0074 (15) | 0.0027 (14) |
| C16 | 0.0292 (18) | 0.0356 (19) | 0.0184 (16) | 0.0067 (15) | 0.0081 (14) | 0.0021 (14) |
| C17 | 0.0261 (18) | 0.0376 (19) | 0.0230 (17) | 0.0103 (15) | 0.0047 (14) | −0.0035 (15) |
| C18 | 0.043 (2) | 0.0314 (19) | 0.0253 (18) | 0.0130 (16) | 0.0100 (16) | 0.0077 (15) |
| C19 | 0.046 (2) | 0.035 (2) | 0.036 (2) | 0.0086 (17) | 0.0176 (17) | 0.0064 (16) |
| C20 | 0.0260 (18) | 0.0265 (18) | 0.0263 (18) | 0.0137 (14) | 0.0094 (15) | 0.0052 (14) |
| C21 | 0.0234 (17) | 0.0249 (17) | 0.0292 (18) | 0.0042 (14) | 0.0072 (14) | 0.0000 (14) |
| C22 | 0.0256 (18) | 0.0321 (18) | 0.0276 (18) | 0.0088 (15) | 0.0114 (14) | 0.0076 (15) |
| C23 | 0.0248 (17) | 0.0263 (17) | 0.0204 (17) | 0.0071 (14) | 0.0052 (14) | 0.0003 (13) |
| C24 | 0.0282 (18) | 0.0263 (17) | 0.0242 (17) | 0.0053 (14) | 0.0061 (14) | 0.0007 (14) |
| C25 | 0.0292 (18) | 0.0249 (17) | 0.0242 (17) | 0.0075 (14) | 0.0095 (14) | 0.0046 (14) |
| C26 | 0.0329 (19) | 0.0179 (16) | 0.0247 (17) | 0.0092 (14) | 0.0085 (15) | 0.0048 (13) |
| C27 | 0.0248 (17) | 0.0273 (17) | 0.0256 (18) | 0.0035 (14) | 0.0053 (14) | 0.0033 (14) |
| C28 | 0.0268 (18) | 0.0322 (18) | 0.0250 (18) | 0.0079 (15) | 0.0095 (14) | 0.0104 (14) |
| C29 | 0.0332 (19) | 0.0233 (17) | 0.0178 (16) | 0.0077 (14) | 0.0045 (14) | 0.0032 (13) |
| C30 | 0.0271 (18) | 0.0328 (19) | 0.0285 (18) | 0.0077 (15) | 0.0050 (15) | 0.0056 (15) |
| C31 | 0.0293 (19) | 0.0346 (19) | 0.0268 (18) | 0.0101 (15) | 0.0096 (15) | 0.0070 (15) |
| N1 | 0.0309 (16) | 0.0331 (15) | 0.0189 (14) | 0.0075 (12) | 0.0072 (12) | 0.0028 (12) |
| N2 | 0.0308 (15) | 0.0296 (15) | 0.0245 (15) | 0.0111 (12) | 0.0093 (12) | 0.0049 (12) |
| N3 | 0.0306 (16) | 0.0308 (15) | 0.0218 (14) | 0.0083 (12) | 0.0070 (12) | 0.0037 (12) |
| N4 | 0.0376 (18) | 0.0333 (16) | 0.0253 (16) | 0.0071 (14) | 0.0045 (14) | 0.0064 (13) |
| O1 | 0.0383 (13) | 0.0302 (12) | 0.0231 (12) | 0.0128 (10) | 0.0121 (10) | 0.0043 (10) |
| O2 | 0.0657 (17) | 0.0346 (14) | 0.0456 (15) | 0.0187 (12) | 0.0329 (13) | 0.0194 (12) |
| O3 | 0.0528 (16) | 0.0625 (17) | 0.0281 (13) | 0.0052 (13) | 0.0163 (12) | 0.0045 (12) |
| O4 | 0.0316 (14) | 0.0597 (16) | 0.0327 (14) | 0.0039 (12) | −0.0035 (11) | 0.0011 (12) |
| C1—C3 | 1.352 (4) | C18—N1 | 1.460 (3) |
| C1—C2 | 1.411 (4) | C18—C19 | 1.519 (4) |
| C1—H1 | 0.9500 | C18—H18A | 0.9900 |
| C2—C4 | 1.350 (4) | C18—H18B | 0.9900 |
| C2—H2 | 0.9500 | C19—H19A | 0.9800 |
| C3—C5 | 1.431 (4) | C19—H19B | 0.9800 |
| C3—H3 | 0.9500 | C19—H19C | 0.9800 |
| C4—C6 | 1.421 (4) | C20—N1 | 1.373 (3) |
| C4—H4 | 0.9500 | C20—C25 | 1.413 (4) |
| C5—C7 | 1.400 (4) | C20—C21 | 1.416 (4) |
| C5—C6 | 1.431 (4) | C21—C22 | 1.373 (4) |
| C6—C8 | 1.397 (4) | C21—H21 | 0.9500 |
| C7—C9 | 1.399 (4) | C22—C23 | 1.392 (4) |
| C7—C15 | 1.500 (4) | C22—H22 | 0.9500 |
| C8—C10 | 1.394 (4) | C23—C24 | 1.392 (4) |
| C8—H8 | 0.9500 | C23—N2 | 1.418 (3) |
| C9—C11 | 1.429 (4) | C24—C25 | 1.376 (4) |
| C9—C10 | 1.433 (4) | C24—H24 | 0.9500 |
| C10—C12 | 1.422 (4) | C25—H25 | 0.9500 |
| C11—C13 | 1.354 (4) | C26—C27 | 1.391 (4) |
| C11—H11 | 0.9500 | C26—C31 | 1.391 (4) |
| C12—C14 | 1.349 (4) | C26—N3 | 1.423 (3) |
| C12—H12 | 0.9500 | C27—C28 | 1.381 (4) |
| C13—C14 | 1.418 (4) | C27—H27 | 0.9500 |
| C13—H13 | 0.9500 | C28—C29 | 1.384 (4) |
| C14—H14 | 0.9500 | C28—H28 | 0.9500 |
| C15—O2 | 1.207 (3) | C29—C30 | 1.378 (4) |
| C15—O1 | 1.341 (3) | C29—N4 | 1.463 (3) |
| C16—O1 | 1.457 (3) | C30—C31 | 1.379 (4) |
| C16—C17 | 1.519 (4) | C30—H30 | 0.9500 |
| C16—H16A | 0.9900 | C31—H31 | 0.9500 |
| C16—H16B | 0.9900 | N2—N3 | 1.275 (3) |
| C17—N1 | 1.457 (3) | N4—O4 | 1.229 (3) |
| C17—H17A | 0.9900 | N4—O3 | 1.230 (3) |
| C17—H17B | 0.9900 | ||
| C3—C1—C2 | 120.9 (3) | N1—C18—C19 | 114.1 (3) |
| C3—C1—H1 | 119.5 | N1—C18—H18A | 108.7 |
| C2—C1—H1 | 119.5 | C19—C18—H18A | 108.7 |
| C4—C2—C1 | 120.2 (3) | N1—C18—H18B | 108.7 |
| C4—C2—H2 | 119.9 | C19—C18—H18B | 108.7 |
| C1—C2—H2 | 119.9 | H18A—C18—H18B | 107.6 |
| C1—C3—C5 | 120.9 (3) | C18—C19—H19A | 109.5 |
| C1—C3—H3 | 119.6 | C18—C19—H19B | 109.5 |
| C5—C3—H3 | 119.6 | H19A—C19—H19B | 109.5 |
| C2—C4—C6 | 121.2 (3) | C18—C19—H19C | 109.5 |
| C2—C4—H4 | 119.4 | H19A—C19—H19C | 109.5 |
| C6—C4—H4 | 119.4 | H19B—C19—H19C | 109.5 |
| C7—C5—C6 | 119.2 (3) | N1—C20—C25 | 122.4 (3) |
| C7—C5—C3 | 122.8 (3) | N1—C20—C21 | 121.0 (3) |
| C6—C5—C3 | 118.0 (3) | C25—C20—C21 | 116.6 (3) |
| C8—C6—C4 | 122.4 (3) | C22—C21—C20 | 121.7 (3) |
| C8—C6—C5 | 118.9 (3) | C22—C21—H21 | 119.2 |
| C4—C6—C5 | 118.8 (3) | C20—C21—H21 | 119.2 |
| C9—C7—C5 | 121.6 (3) | C21—C22—C23 | 120.8 (3) |
| C9—C7—C15 | 120.1 (3) | C21—C22—H22 | 119.6 |
| C5—C7—C15 | 118.2 (3) | C23—C22—H22 | 119.6 |
| C10—C8—C6 | 122.2 (3) | C22—C23—C24 | 118.4 (3) |
| C10—C8—H8 | 118.9 | C22—C23—N2 | 124.4 (3) |
| C6—C8—H8 | 118.9 | C24—C23—N2 | 117.1 (3) |
| C7—C9—C11 | 123.4 (3) | C25—C24—C23 | 121.6 (3) |
| C7—C9—C10 | 119.1 (3) | C25—C24—H24 | 119.2 |
| C11—C9—C10 | 117.5 (3) | C23—C24—H24 | 119.2 |
| C8—C10—C12 | 121.6 (3) | C24—C25—C20 | 120.8 (3) |
| C8—C10—C9 | 118.9 (3) | C24—C25—H25 | 119.6 |
| C12—C10—C9 | 119.5 (3) | C20—C25—H25 | 119.6 |
| C13—C11—C9 | 121.1 (3) | C27—C26—C31 | 120.1 (3) |
| C13—C11—H11 | 119.5 | C27—C26—N3 | 116.6 (3) |
| C9—C11—H11 | 119.5 | C31—C26—N3 | 123.3 (3) |
| C14—C12—C10 | 121.0 (3) | C28—C27—C26 | 120.0 (3) |
| C14—C12—H12 | 119.5 | C28—C27—H27 | 120.0 |
| C10—C12—H12 | 119.5 | C26—C27—H27 | 120.0 |
| C11—C13—C14 | 121.0 (3) | C27—C28—C29 | 118.5 (3) |
| C11—C13—H13 | 119.5 | C27—C28—H28 | 120.8 |
| C14—C13—H13 | 119.5 | C29—C28—H28 | 120.8 |
| C12—C14—C13 | 120.0 (3) | C30—C29—C28 | 122.6 (3) |
| C12—C14—H14 | 120.0 | C30—C29—N4 | 118.6 (3) |
| C13—C14—H14 | 120.0 | C28—C29—N4 | 118.8 (3) |
| O2—C15—O1 | 123.0 (3) | C29—C30—C31 | 118.5 (3) |
| O2—C15—C7 | 124.5 (3) | C29—C30—H30 | 120.8 |
| O1—C15—C7 | 112.4 (3) | C31—C30—H30 | 120.8 |
| O1—C16—C17 | 107.3 (2) | C30—C31—C26 | 120.3 (3) |
| O1—C16—H16A | 110.3 | C30—C31—H31 | 119.9 |
| C17—C16—H16A | 110.3 | C26—C31—H31 | 119.9 |
| O1—C16—H16B | 110.3 | C20—N1—C17 | 120.5 (2) |
| C17—C16—H16B | 110.3 | C20—N1—C18 | 121.5 (2) |
| H16A—C16—H16B | 108.5 | C17—N1—C18 | 118.0 (2) |
| N1—C17—C16 | 115.0 (2) | N3—N2—C23 | 113.5 (2) |
| N1—C17—H17A | 108.5 | N2—N3—C26 | 112.1 (2) |
| C16—C17—H17A | 108.5 | O4—N4—O3 | 122.8 (3) |
| N1—C17—H17B | 108.5 | O4—N4—C29 | 118.6 (3) |
| C16—C17—H17B | 108.5 | O3—N4—C29 | 118.6 (3) |
| H17A—C17—H17B | 107.5 | C15—O1—C16 | 115.4 (2) |
| H··· | ||||
| C1—H1···O3i | 0.95 | 2.56 | 3.230 (4) | 128 |
| C3—H3···O4i | 0.95 | 2.65 | 3.570 (4) | 163 |
| C16—H16B···O4i | 0.99 | 2.61 | 3.462 (4) | 144 |
| C21—H21···O2ii | 0.95 | 2.31 | 3.176 (4) | 152 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C1—H1⋯O3i | 0.95 | 2.56 | 3.230 (4) | 128 |
| C3—H3⋯O4i | 0.95 | 2.65 | 3.570 (4) | 163 |
| C16—H16 | 0.99 | 2.61 | 3.462 (4) | 144 |
| C21—H21⋯O2ii | 0.95 | 2.31 | 3.176 (4) | 152 |
Symmetry codes: (i) ; (ii) .