| Literature DB >> 21201925 |
Rafael Tamazyan, Armen Ayvazyan, Ashot Martirosyan, Gohar Harutyunyan, Vahan Martirosyan.
Abstract
The title compound, C(18)H(15)ClN(2)O(2), is a potential human immunodeficiency virus type-1 (HIV-1) non-nucleoside reverse transcriptase inhibitor. The pyrrolidine ring adopts an envelope and the diazepine ring a boat conformation. In the crystal structure, two isomers (R and S) form centrosymmetric dimers via N-H⋯O hydrogen bonds.Entities:
Year: 2008 PMID: 21201925 PMCID: PMC2960833 DOI: 10.1107/S160053680800408X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H15ClN2O2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 22 reflections | |
| θ = 12.6–16.6° | |
| µ = 0.26 mm−1 | |
| α = 86.90 (3)° | |
| β = 71.35 (3)° | Prism, colourless |
| γ = 88.27 (3)° | 0.35 × 0.32 × 0.28 mm |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 30.0°, θmin = 2.2° |
| graphite | |
| θ/2θ scans | |
| 7347 measured reflections | |
| 4514 independent reflections | 3 standard reflections every 180 min |
| 3148 reflections with | intensity decay: none |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| All H-atom parameters refined | |
| 4514 reflections | (Δ/σ)max < 0.001 |
| 268 parameters | Δρmax = 0.27 e Å−3 |
| 0 restraints | Δρmin = −0.31 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C2 | 0.70626 (17) | 0.27403 (17) | 1.00932 (16) | 0.0333 (3) | |
| C3 | 0.66409 (19) | 0.11255 (18) | 1.04089 (17) | 0.0389 (3) | |
| C5 | 0.91077 (18) | 0.04305 (16) | 0.85230 (16) | 0.0343 (3) | |
| C6 | 0.9468 (2) | −0.05252 (19) | 0.74145 (19) | 0.0432 (4) | |
| C7 | 1.0802 (2) | −0.0350 (2) | 0.6255 (2) | 0.0488 (4) | |
| C8 | 1.1788 (2) | 0.0798 (2) | 0.61835 (19) | 0.0470 (4) | |
| C9 | 1.1492 (2) | 0.1717 (2) | 0.72885 (19) | 0.0418 (4) | |
| C10 | 1.01455 (17) | 0.15430 (16) | 0.84775 (16) | 0.0332 (3) | |
| C11 | 0.99809 (17) | 0.25083 (15) | 0.96767 (16) | 0.0319 (3) | |
| C14 | 0.8259 (2) | 0.37447 (19) | 1.17444 (18) | 0.0391 (3) | |
| C15 | 0.6494 (2) | 0.3646 (2) | 1.24567 (19) | 0.0493 (4) | |
| C16 | 0.5879 (2) | 0.3677 (2) | 1.11921 (19) | 0.0448 (4) | |
| C17 | 0.71935 (17) | 0.32632 (16) | 0.85722 (16) | 0.0335 (3) | |
| C18 | 0.8016 (2) | 0.45256 (19) | 0.79868 (18) | 0.0405 (4) | |
| C19 | 0.8104 (2) | 0.5045 (2) | 0.6632 (2) | 0.0519 (4) | |
| C20 | 0.7365 (3) | 0.4332 (2) | 0.5842 (2) | 0.0571 (5) | |
| C21 | 0.6523 (3) | 0.3101 (2) | 0.6421 (2) | 0.0562 (5) | |
| C22 | 0.6436 (2) | 0.2556 (2) | 0.7781 (2) | 0.0439 (4) | |
| Cl | 1.33908 (7) | 0.10803 (8) | 0.46554 (6) | 0.0735 (2) | |
| H4 | 0.745 (2) | −0.072 (2) | 0.987 (2) | 0.052 (6)* | |
| H6 | 0.874 (2) | −0.135 (2) | 0.747 (2) | 0.047 (5)* | |
| H7 | 1.101 (3) | −0.097 (2) | 0.551 (2) | 0.062 (6)* | |
| H9 | 1.219 (2) | 0.246 (2) | 0.725 (2) | 0.049 (5)* | |
| H18 | 0.851 (2) | 0.504 (2) | 0.853 (2) | 0.048 (5)* | |
| H19 | 0.864 (3) | 0.590 (3) | 0.625 (2) | 0.065 (7)* | |
| H20 | 0.745 (3) | 0.481 (2) | 0.482 (3) | 0.064 (6)* | |
| H21 | 0.599 (3) | 0.259 (2) | 0.595 (2) | 0.058 (6)* | |
| H22 | 0.584 (2) | 0.174 (2) | 0.816 (2) | 0.051 (6)* | |
| H14A | 0.856 (2) | 0.473 (2) | 1.1500 (19) | 0.040 (5)* | |
| H15A | 0.608 (3) | 0.445 (3) | 1.311 (2) | 0.065 (6)* | |
| H16A | 0.596 (2) | 0.467 (2) | 1.080 (2) | 0.052 (6)* | |
| H14B | 0.886 (2) | 0.328 (2) | 1.233 (2) | 0.048 (5)* | |
| H15B | 0.623 (2) | 0.270 (2) | 1.301 (2) | 0.054 (6)* | |
| H16B | 0.484 (3) | 0.331 (2) | 1.139 (2) | 0.055 (6)* | |
| N1 | 0.85316 (15) | 0.29356 (14) | 1.04452 (13) | 0.0327 (3) | |
| N4 | 0.77286 (16) | 0.01605 (16) | 0.96731 (15) | 0.0390 (3) | |
| O12 | 1.11592 (13) | 0.28878 (12) | 0.99545 (13) | 0.0410 (3) | |
| O13 | 0.54222 (16) | 0.07208 (16) | 1.12946 (15) | 0.0604 (4) |
| C2 | 0.0302 (7) | 0.0378 (8) | 0.0323 (7) | −0.0007 (6) | −0.0102 (5) | −0.0035 (6) |
| C3 | 0.0373 (8) | 0.0440 (9) | 0.0352 (8) | −0.0102 (6) | −0.0106 (6) | −0.0001 (6) |
| C5 | 0.0389 (8) | 0.0298 (7) | 0.0351 (7) | 0.0016 (6) | −0.0134 (6) | 0.0008 (6) |
| C6 | 0.0543 (10) | 0.0354 (8) | 0.0433 (9) | 0.0004 (7) | −0.0199 (8) | −0.0040 (7) |
| C7 | 0.0610 (11) | 0.0468 (10) | 0.0399 (9) | 0.0125 (8) | −0.0178 (8) | −0.0093 (8) |
| C8 | 0.0423 (9) | 0.0553 (11) | 0.0373 (8) | 0.0095 (8) | −0.0055 (7) | 0.0000 (8) |
| C9 | 0.0352 (8) | 0.0438 (9) | 0.0437 (9) | 0.0006 (7) | −0.0092 (7) | 0.0006 (7) |
| C10 | 0.0324 (7) | 0.0316 (7) | 0.0359 (7) | 0.0017 (5) | −0.0118 (6) | −0.0001 (6) |
| C11 | 0.0342 (7) | 0.0263 (7) | 0.0361 (7) | −0.0030 (5) | −0.0131 (6) | 0.0040 (5) |
| C14 | 0.0480 (9) | 0.0360 (8) | 0.0367 (8) | 0.0009 (7) | −0.0174 (7) | −0.0070 (7) |
| C15 | 0.0494 (10) | 0.0602 (12) | 0.0365 (9) | 0.0050 (9) | −0.0102 (7) | −0.0112 (8) |
| C16 | 0.0394 (9) | 0.0540 (11) | 0.0407 (9) | 0.0087 (8) | −0.0115 (7) | −0.0118 (8) |
| C17 | 0.0310 (7) | 0.0363 (8) | 0.0343 (7) | 0.0047 (6) | −0.0119 (6) | −0.0050 (6) |
| C18 | 0.0417 (9) | 0.0405 (9) | 0.0418 (9) | −0.0001 (7) | −0.0168 (7) | −0.0032 (7) |
| C19 | 0.0563 (11) | 0.0507 (11) | 0.0463 (10) | −0.0007 (9) | −0.0147 (8) | 0.0080 (8) |
| C20 | 0.0711 (13) | 0.0641 (13) | 0.0382 (9) | 0.0087 (10) | −0.0213 (9) | −0.0014 (9) |
| C21 | 0.0687 (13) | 0.0618 (12) | 0.0508 (11) | 0.0060 (10) | −0.0354 (10) | −0.0148 (9) |
| C22 | 0.0462 (9) | 0.0440 (9) | 0.0467 (9) | −0.0005 (7) | −0.0215 (8) | −0.0068 (8) |
| Cl | 0.0554 (3) | 0.0986 (5) | 0.0498 (3) | 0.0051 (3) | 0.0065 (2) | −0.0053 (3) |
| N1 | 0.0349 (6) | 0.0337 (6) | 0.0318 (6) | −0.0002 (5) | −0.0134 (5) | −0.0037 (5) |
| N4 | 0.0418 (7) | 0.0314 (7) | 0.0417 (7) | −0.0078 (5) | −0.0106 (6) | 0.0026 (6) |
| O12 | 0.0371 (6) | 0.0362 (6) | 0.0532 (7) | −0.0047 (4) | −0.0189 (5) | −0.0019 (5) |
| O13 | 0.0519 (8) | 0.0631 (9) | 0.0522 (8) | −0.0217 (7) | 0.0050 (6) | −0.0049 (6) |
| C2—N1 | 1.4858 (19) | C14—C15 | 1.517 (3) |
| C2—C17 | 1.527 (2) | C14—H14A | 0.956 (19) |
| C2—C3 | 1.538 (2) | C14—H14B | 0.99 (2) |
| C2—C16 | 1.539 (2) | C15—C16 | 1.522 (3) |
| C3—O13 | 1.217 (2) | C15—H15A | 0.99 (2) |
| C3—N4 | 1.356 (2) | C15—H15B | 1.00 (2) |
| C5—C10 | 1.395 (2) | C16—H16A | 0.97 (2) |
| C5—C6 | 1.396 (2) | C16—H16B | 0.96 (2) |
| C5—N4 | 1.407 (2) | C17—C22 | 1.387 (2) |
| C6—C7 | 1.375 (3) | C17—C18 | 1.393 (2) |
| C6—H6 | 1.010 (19) | C18—C19 | 1.380 (3) |
| C7—C8 | 1.385 (3) | C18—H18 | 0.95 (2) |
| C7—H7 | 0.93 (2) | C19—C20 | 1.378 (3) |
| C8—C9 | 1.374 (3) | C19—H19 | 0.94 (2) |
| C8—Cl | 1.7370 (19) | C20—C21 | 1.376 (3) |
| C9—C10 | 1.398 (2) | C20—H20 | 1.06 (2) |
| C9—H9 | 0.93 (2) | C21—C22 | 1.392 (3) |
| C10—C11 | 1.490 (2) | C21—H21 | 0.92 (2) |
| C11—O12 | 1.2391 (18) | C22—H22 | 0.92 (2) |
| C11—N1 | 1.340 (2) | N4—H4 | 0.85 (2) |
| C14—N1 | 1.472 (2) | ||
| N1—C2—C17 | 113.17 (12) | C14—C15—C16 | 102.64 (15) |
| N1—C2—C3 | 106.65 (12) | C14—C15—H15A | 111.5 (13) |
| C17—C2—C3 | 113.09 (13) | C16—C15—H15A | 113.8 (13) |
| N1—C2—C16 | 101.84 (12) | C14—C15—H15B | 110.0 (12) |
| C17—C2—C16 | 111.26 (13) | C16—C15—H15B | 109.7 (12) |
| C3—C2—C16 | 110.18 (14) | H15A—C15—H15B | 109.1 (18) |
| O13—C3—N4 | 121.24 (16) | C15—C16—C2 | 104.63 (14) |
| O13—C3—C2 | 122.47 (16) | C15—C16—H16A | 107.3 (12) |
| N4—C3—C2 | 116.26 (13) | C2—C16—H16A | 107.6 (12) |
| C10—C5—C6 | 119.46 (15) | C15—C16—H16B | 115.7 (13) |
| C10—C5—N4 | 123.50 (14) | C2—C16—H16B | 109.7 (13) |
| C6—C5—N4 | 116.96 (15) | H16A—C16—H16B | 111.4 (18) |
| C7—C6—C5 | 120.84 (17) | C22—C17—C18 | 118.84 (15) |
| C7—C6—H6 | 119.9 (11) | C22—C17—C2 | 121.50 (15) |
| C5—C6—H6 | 119.3 (11) | C18—C17—C2 | 119.56 (14) |
| C6—C7—C8 | 119.40 (17) | C19—C18—C17 | 120.52 (17) |
| C6—C7—H7 | 120.2 (14) | C19—C18—H18 | 119.7 (12) |
| C8—C7—H7 | 120.4 (14) | C17—C18—H18 | 119.8 (12) |
| C9—C8—C7 | 120.77 (17) | C20—C19—C18 | 120.54 (19) |
| C9—C8—Cl | 120.40 (15) | C20—C19—H19 | 119.1 (14) |
| C7—C8—Cl | 118.82 (15) | C18—C19—H19 | 120.3 (14) |
| C8—C9—C10 | 120.23 (17) | C21—C20—C19 | 119.41 (18) |
| C8—C9—H9 | 120.2 (12) | C21—C20—H20 | 124.0 (12) |
| C10—C9—H9 | 119.6 (12) | C19—C20—H20 | 116.5 (12) |
| C5—C10—C9 | 119.18 (15) | C20—C21—C22 | 120.71 (19) |
| C5—C10—C11 | 123.97 (14) | C20—C21—H21 | 123.0 (13) |
| C9—C10—C11 | 116.69 (14) | C22—C21—H21 | 116.3 (14) |
| O12—C11—N1 | 121.43 (14) | C17—C22—C21 | 119.96 (18) |
| O12—C11—C10 | 120.38 (14) | C17—C22—H22 | 120.9 (13) |
| N1—C11—C10 | 118.18 (13) | C21—C22—H22 | 119.1 (13) |
| N1—C14—C15 | 103.15 (14) | C11—N1—C14 | 121.27 (13) |
| N1—C14—H14A | 110.2 (11) | C11—N1—C2 | 126.30 (12) |
| C15—C14—H14A | 110.6 (11) | C14—N1—C2 | 112.36 (12) |
| N1—C14—H14B | 109.6 (11) | C3—N4—C5 | 128.71 (14) |
| C15—C14—H14B | 112.6 (11) | C3—N4—H4 | 113.7 (14) |
| H14A—C14—H14B | 110.4 (15) | C5—N4—H4 | 116.9 (14) |
| N1—C2—C3—O13 | 118.43 (17) | C3—C2—C17—C22 | 23.3 (2) |
| C17—C2—C3—O13 | −116.54 (18) | C16—C2—C17—C22 | −101.29 (18) |
| C16—C2—C3—O13 | 8.7 (2) | N1—C2—C17—C18 | −38.96 (19) |
| N1—C2—C3—N4 | −59.63 (17) | C3—C2—C17—C18 | −160.38 (14) |
| C17—C2—C3—N4 | 65.40 (18) | C16—C2—C17—C18 | 75.00 (18) |
| C16—C2—C3—N4 | −169.39 (14) | C22—C17—C18—C19 | −1.4 (2) |
| C10—C5—C6—C7 | −2.5 (2) | C2—C17—C18—C19 | −177.78 (16) |
| N4—C5—C6—C7 | −179.40 (15) | C17—C18—C19—C20 | 0.7 (3) |
| C5—C6—C7—C8 | −0.6 (3) | C18—C19—C20—C21 | 0.6 (3) |
| C6—C7—C8—C9 | 3.3 (3) | C19—C20—C21—C22 | −1.2 (3) |
| C6—C7—C8—Cl | −175.46 (14) | C18—C17—C22—C21 | 0.8 (3) |
| C7—C8—C9—C10 | −2.9 (3) | C2—C17—C22—C21 | 177.10 (16) |
| Cl—C8—C9—C10 | 175.88 (13) | C20—C21—C22—C17 | 0.5 (3) |
| C6—C5—C10—C9 | 2.9 (2) | O12—C11—N1—C14 | −6.6 (2) |
| N4—C5—C10—C9 | 179.60 (14) | C10—C11—N1—C14 | 172.75 (13) |
| C6—C5—C10—C11 | −172.22 (14) | O12—C11—N1—C2 | 170.27 (13) |
| N4—C5—C10—C11 | 4.5 (2) | C10—C11—N1—C2 | −10.4 (2) |
| C8—C9—C10—C5 | −0.3 (2) | C15—C14—N1—C11 | −165.56 (14) |
| C8—C9—C10—C11 | 175.20 (15) | C15—C14—N1—C2 | 17.18 (18) |
| C5—C10—C11—O12 | 141.38 (15) | C17—C2—N1—C11 | −50.6 (2) |
| C9—C10—C11—O12 | −33.9 (2) | C3—C2—N1—C11 | 74.38 (18) |
| C5—C10—C11—N1 | −38.0 (2) | C16—C2—N1—C11 | −170.11 (15) |
| C9—C10—C11—N1 | 146.80 (14) | C17—C2—N1—C14 | 126.50 (14) |
| N1—C14—C15—C16 | −34.22 (19) | C3—C2—N1—C14 | −108.52 (14) |
| C14—C15—C16—C2 | 39.5 (2) | C16—C2—N1—C14 | 6.98 (17) |
| N1—C2—C16—C15 | −28.50 (18) | O13—C3—N4—C5 | 172.76 (16) |
| C17—C2—C16—C15 | −149.37 (15) | C2—C3—N4—C5 | −9.1 (2) |
| C3—C2—C16—C15 | 84.38 (18) | C10—C5—N4—C3 | 43.9 (2) |
| N1—C2—C17—C22 | 144.75 (15) | C6—C5—N4—C3 | −139.36 (17) |
| H··· | ||||
| N4—H4···O12i | 0.85 (2) | 2.35 (2) | 2.997 (2) | 133 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H4⋯O12i | 0.85 (2) | 2.35 (2) | 2.997 (2) | 133 (2) |
Symmetry code: (i) .