| Literature DB >> 21201919 |
Rafael Tamazyan, Armen Ayvazyan, Ashot Martirosyan, Gohar Harutunyan, Vahan Martirosyan.
Abstract
In the title compound, C(18)H(17)BrN(2)O(2), which is a potential -human immunodeficiency virus type 1 (HIV-1) non-nucleoside reverse transcriptase inhibitor, the pyrrolidine ring exhibits an envelope conformation. In the crystal structure, inter-molecular N-H⋯O hydrogen bonds [N⋯O = 2.861 (3) Å] link the mol-ecules into centrosymmetric dimers.Entities:
Year: 2008 PMID: 21201919 PMCID: PMC2960799 DOI: 10.1107/S1600536808003954
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H17BrN2O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| θ = 13–16º | |
| µ = 2.38 mm−1 | |
| β = 96.99 (2)º | Spherical, colourless |
| 0.28 × 0.28 × 0.28 × 0.14 (radius) mm | |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 28.0º |
| Monochromator: graphite | θmin = 2.1º |
| θ/2θ scans | |
| Absorption correction: for a sphere(SHELXTL; Sheldrick, 2008) | |
| 3 standard reflections | |
| 8356 measured reflections | every 180 min |
| 4180 independent reflections | intensity decay: none |
| 2941 reflections with |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max = 0.001 | |
| 4180 reflections | Δρmax = 0.87 e Å−3 |
| 216 parameters | Δρmin = −0.89 e Å−3 |
| 10 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | 0.68968 (4) | 1.01480 (3) | 0.85408 (3) | 0.07187 (17) | |
| C1 | −0.0555 (2) | 0.71666 (16) | 0.64026 (16) | 0.0217 (4) | |
| N2 | 0.08435 (19) | 0.75423 (14) | 0.68588 (13) | 0.0230 (4) | |
| C3 | 0.1138 (3) | 0.7265 (2) | 0.79443 (18) | 0.0372 (6) | |
| H3A | 0.1112 | 0.7831 | 0.8379 | 0.045* | |
| H3B | 0.2051 | 0.6955 | 0.8084 | 0.045* | |
| C4 | −0.0033 (3) | 0.65609 (19) | 0.80987 (18) | 0.0330 (5) | |
| H4A | −0.0257 | 0.6581 | 0.8790 | 0.040* | |
| H4B | 0.0215 | 0.5900 | 0.7935 | 0.040* | |
| C5 | −0.1249 (3) | 0.69388 (18) | 0.73599 (17) | 0.0277 (5) | |
| H5A | −0.1656 | 0.7520 | 0.7620 | 0.033* | |
| H5B | −0.1977 | 0.6449 | 0.7224 | 0.033* | |
| C6 | −0.0375 (2) | 0.62094 (16) | 0.58089 (16) | 0.0225 (5) | |
| N7 | 0.0475 (3) | 0.62518 (17) | 0.50977 (16) | 0.0310 (5) | |
| H7A | 0.060 (3) | 0.572 (2) | 0.477 (2) | 0.026 (7)* | |
| H7B | 0.089 (3) | 0.677 (2) | 0.502 (2) | 0.038 (8)* | |
| O8 | −0.1011 (2) | 0.54709 (12) | 0.60012 (14) | 0.0357 (4) | |
| C9 | −0.1430 (2) | 0.78995 (16) | 0.57304 (17) | 0.0245 (5) | |
| C10 | −0.1242 (3) | 0.88979 (18) | 0.5831 (2) | 0.0333 (5) | |
| H10 | −0.0515 | 0.9139 | 0.6291 | 0.040* | |
| C11 | −0.2120 (3) | 0.9539 (2) | 0.5257 (2) | 0.0448 (7) | |
| H11 | −0.1975 | 1.0206 | 0.5328 | 0.054* | |
| C12 | −0.3217 (3) | 0.9190 (2) | 0.4578 (2) | 0.0484 (8) | |
| H12 | −0.3811 | 0.9621 | 0.4193 | 0.058* | |
| C13 | −0.3422 (3) | 0.8208 (2) | 0.4475 (2) | 0.0454 (7) | |
| H13 | −0.4160 | 0.7973 | 0.4021 | 0.055* | |
| C14 | −0.2534 (3) | 0.75578 (19) | 0.50447 (19) | 0.0341 (6) | |
| H14 | −0.2680 | 0.6891 | 0.4966 | 0.041* | |
| C15 | 0.1780 (2) | 0.79997 (16) | 0.63414 (17) | 0.0244 (5) | |
| O16 | 0.16487 (18) | 0.80521 (12) | 0.54045 (12) | 0.0298 (4) | |
| C17 | 0.3019 (2) | 0.84793 (17) | 0.69371 (18) | 0.0264 (5) | |
| C18 | 0.4350 (3) | 0.8311 (2) | 0.6659 (2) | 0.0356 (6) | |
| H18 | 0.4463 | 0.7867 | 0.6148 | 0.043* | |
| C19 | 0.5505 (3) | 0.8797 (2) | 0.7137 (2) | 0.0441 (7) | |
| H19 | 0.6397 | 0.8679 | 0.6955 | 0.053* | |
| C20 | 0.5317 (3) | 0.9461 (2) | 0.7890 (2) | 0.0412 (7) | |
| C21 | 0.4003 (3) | 0.9652 (2) | 0.8166 (2) | 0.0410 (6) | |
| H21 | 0.3892 | 1.0110 | 0.8666 | 0.049* | |
| C22 | 0.2853 (3) | 0.91537 (19) | 0.7691 (2) | 0.0337 (6) | |
| H22 | 0.1962 | 0.9271 | 0.7877 | 0.040* |
| Br1 | 0.0470 (2) | 0.0818 (3) | 0.0793 (3) | −0.02922 (18) | −0.02262 (18) | 0.0072 (2) |
| C1 | 0.0249 (10) | 0.0220 (11) | 0.0184 (10) | −0.0011 (8) | 0.0038 (8) | −0.0017 (8) |
| N2 | 0.0263 (9) | 0.0274 (10) | 0.0154 (9) | −0.0030 (8) | 0.0033 (7) | −0.0008 (7) |
| C3 | 0.0455 (15) | 0.0498 (16) | 0.0152 (11) | −0.0080 (12) | −0.0002 (10) | 0.0018 (11) |
| C4 | 0.0441 (14) | 0.0370 (14) | 0.0188 (11) | −0.0031 (11) | 0.0070 (10) | 0.0039 (10) |
| C5 | 0.0329 (12) | 0.0292 (12) | 0.0229 (11) | 0.0000 (10) | 0.0108 (9) | −0.0012 (9) |
| C6 | 0.0273 (11) | 0.0230 (11) | 0.0170 (10) | 0.0020 (9) | 0.0014 (8) | 0.0005 (8) |
| N7 | 0.0464 (13) | 0.0213 (11) | 0.0280 (11) | −0.0039 (10) | 0.0159 (9) | −0.0048 (9) |
| O8 | 0.0492 (11) | 0.0245 (9) | 0.0365 (10) | −0.0080 (8) | 0.0176 (8) | −0.0047 (7) |
| C9 | 0.0266 (11) | 0.0263 (11) | 0.0216 (11) | 0.0033 (9) | 0.0070 (9) | 0.0019 (9) |
| C10 | 0.0359 (13) | 0.0281 (13) | 0.0367 (14) | 0.0033 (10) | 0.0076 (11) | 0.0004 (11) |
| C11 | 0.0519 (17) | 0.0289 (13) | 0.0556 (19) | 0.0102 (12) | 0.0146 (15) | 0.0123 (13) |
| C12 | 0.0484 (17) | 0.0498 (18) | 0.0472 (17) | 0.0196 (14) | 0.0065 (14) | 0.0200 (14) |
| C13 | 0.0398 (15) | 0.0563 (19) | 0.0375 (16) | 0.0111 (13) | −0.0064 (12) | 0.0058 (13) |
| C14 | 0.0359 (13) | 0.0332 (13) | 0.0324 (13) | 0.0040 (11) | 0.0011 (11) | −0.0017 (11) |
| C15 | 0.0282 (11) | 0.0221 (11) | 0.0237 (11) | 0.0022 (9) | 0.0063 (9) | −0.0015 (9) |
| O16 | 0.0383 (9) | 0.0314 (9) | 0.0208 (8) | −0.0058 (7) | 0.0078 (7) | −0.0010 (7) |
| C17 | 0.0257 (11) | 0.0270 (11) | 0.0267 (11) | 0.0000 (9) | 0.0042 (9) | 0.0001 (10) |
| C18 | 0.0310 (13) | 0.0372 (14) | 0.0398 (15) | 0.0024 (11) | 0.0095 (11) | −0.0016 (11) |
| C19 | 0.0244 (12) | 0.0528 (17) | 0.0552 (18) | 0.0022 (11) | 0.0060 (12) | 0.0068 (15) |
| C20 | 0.0299 (13) | 0.0445 (15) | 0.0453 (16) | −0.0118 (11) | −0.0107 (11) | 0.0070 (13) |
| C21 | 0.0430 (15) | 0.0394 (15) | 0.0392 (15) | −0.0072 (12) | −0.0001 (12) | −0.0086 (12) |
| C22 | 0.0287 (12) | 0.0357 (13) | 0.0374 (14) | −0.0013 (10) | 0.0064 (10) | −0.0093 (11) |
| Br1—C20 | 1.899 (3) | C10—C11 | 1.382 (4) |
| C1—N2 | 1.493 (3) | C10—H10 | 0.9300 |
| C1—C9 | 1.527 (3) | C11—C12 | 1.385 (5) |
| C1—C5 | 1.538 (3) | C11—H11 | 0.9300 |
| C1—C6 | 1.554 (3) | C12—C13 | 1.368 (5) |
| N2—C15 | 1.350 (3) | C12—H12 | 0.9300 |
| N2—C3 | 1.487 (3) | C13—C14 | 1.392 (4) |
| C3—C4 | 1.513 (4) | C13—H13 | 0.9300 |
| C3—H3A | 0.9700 | C14—H14 | 0.9300 |
| C3—H3B | 0.9700 | C15—O16 | 1.239 (3) |
| C4—C5 | 1.520 (3) | C15—C17 | 1.496 (3) |
| C4—H4A | 0.9700 | C17—C18 | 1.388 (3) |
| C4—H4B | 0.9700 | C17—C22 | 1.389 (3) |
| C5—H5A | 0.9700 | C18—C19 | 1.378 (4) |
| C5—H5B | 0.9700 | C18—H18 | 0.9300 |
| C6—O8 | 1.226 (3) | C19—C20 | 1.383 (4) |
| C6—N7 | 1.321 (3) | C19—H19 | 0.9300 |
| N7—H7A | 0.86 (3) | C20—C21 | 1.378 (4) |
| N7—H7B | 0.83 (3) | C21—C22 | 1.383 (4) |
| C9—C10 | 1.388 (3) | C21—H21 | 0.9300 |
| C9—C14 | 1.391 (3) | C22—H22 | 0.9300 |
| N2—C1—C9 | 114.23 (18) | C11—C10—C9 | 121.0 (3) |
| N2—C1—C5 | 100.93 (17) | C11—C10—H10 | 119.5 |
| C9—C1—C5 | 110.99 (18) | C9—C10—H10 | 119.5 |
| N2—C1—C6 | 110.43 (17) | C10—C11—C12 | 120.1 (3) |
| C9—C1—C6 | 110.32 (17) | C10—C11—H11 | 120.0 |
| C5—C1—C6 | 109.54 (18) | C12—C11—H11 | 120.0 |
| C15—N2—C3 | 123.7 (2) | C13—C12—C11 | 119.6 (3) |
| C15—N2—C1 | 124.89 (18) | C13—C12—H12 | 120.2 |
| C3—N2—C1 | 111.14 (18) | C11—C12—H12 | 120.2 |
| N2—C3—C4 | 103.87 (19) | C12—C13—C14 | 120.6 (3) |
| N2—C3—H3A | 111.0 | C12—C13—H13 | 119.7 |
| C4—C3—H3A | 111.0 | C14—C13—H13 | 119.7 |
| N2—C3—H3B | 111.0 | C9—C14—C13 | 120.3 (3) |
| C4—C3—H3B | 111.0 | C9—C14—H14 | 119.8 |
| H3A—C3—H3B | 109.0 | C13—C14—H14 | 119.8 |
| C3—C4—C5 | 102.4 (2) | O16—C15—N2 | 123.2 (2) |
| C3—C4—H4A | 111.3 | O16—C15—C17 | 118.9 (2) |
| C5—C4—H4A | 111.3 | N2—C15—C17 | 117.9 (2) |
| C3—C4—H4B | 111.3 | C18—C17—C22 | 119.5 (2) |
| C5—C4—H4B | 111.3 | C18—C17—C15 | 118.6 (2) |
| H4A—C4—H4B | 109.2 | C22—C17—C15 | 121.5 (2) |
| C4—C5—C1 | 103.39 (19) | C19—C18—C17 | 120.5 (3) |
| C4—C5—H5A | 111.1 | C19—C18—H18 | 119.8 |
| C1—C5—H5A | 111.1 | C17—C18—H18 | 119.8 |
| C4—C5—H5B | 111.1 | C18—C19—C20 | 119.1 (3) |
| C1—C5—H5B | 111.1 | C18—C19—H19 | 120.5 |
| H5A—C5—H5B | 109.1 | C20—C19—H19 | 120.5 |
| O8—C6—N7 | 123.4 (2) | C21—C20—C19 | 121.5 (2) |
| O8—C6—C1 | 120.3 (2) | C21—C20—Br1 | 119.0 (2) |
| N7—C6—C1 | 116.3 (2) | C19—C20—Br1 | 119.5 (2) |
| C6—N7—H7A | 117.1 (18) | C20—C21—C22 | 119.0 (3) |
| C6—N7—H7B | 119 (2) | C20—C21—H21 | 120.5 |
| H7A—N7—H7B | 124 (3) | C22—C21—H21 | 120.5 |
| C10—C9—C14 | 118.4 (2) | C21—C22—C17 | 120.4 (2) |
| C10—C9—C1 | 122.7 (2) | C21—C22—H22 | 119.8 |
| C14—C9—C1 | 118.7 (2) | C17—C22—H22 | 119.8 |
| C9—C1—N2—C15 | −49.1 (3) | C1—C9—C10—C11 | −175.3 (2) |
| C5—C1—N2—C15 | −168.3 (2) | C9—C10—C11—C12 | 0.7 (4) |
| C6—C1—N2—C15 | 75.9 (3) | C10—C11—C12—C13 | −0.2 (5) |
| C9—C1—N2—C3 | 136.3 (2) | C11—C12—C13—C14 | −0.3 (5) |
| C5—C1—N2—C3 | 17.2 (2) | C10—C9—C14—C13 | 0.1 (4) |
| C6—C1—N2—C3 | −98.6 (2) | C1—C9—C14—C13 | 175.0 (2) |
| C15—N2—C3—C4 | −165.7 (2) | C12—C13—C14—C9 | 0.3 (4) |
| C1—N2—C3—C4 | 9.0 (3) | C3—N2—C15—O16 | 164.8 (2) |
| N2—C3—C4—C5 | −31.7 (3) | C1—N2—C15—O16 | −9.1 (3) |
| C3—C4—C5—C1 | 43.1 (2) | C3—N2—C15—C17 | −16.3 (3) |
| N2—C1—C5—C4 | −36.6 (2) | C1—N2—C15—C17 | 169.74 (19) |
| C9—C1—C5—C4 | −158.09 (19) | O16—C15—C17—C18 | −48.8 (3) |
| C6—C1—C5—C4 | 79.8 (2) | N2—C15—C17—C18 | 132.3 (2) |
| N2—C1—C6—O8 | 125.4 (2) | O16—C15—C17—C22 | 125.0 (3) |
| C9—C1—C6—O8 | −107.4 (2) | N2—C15—C17—C22 | −53.9 (3) |
| C5—C1—C6—O8 | 15.1 (3) | C22—C17—C18—C19 | 1.0 (4) |
| N2—C1—C6—N7 | −55.3 (3) | C15—C17—C18—C19 | 174.9 (2) |
| C9—C1—C6—N7 | 71.9 (3) | C17—C18—C19—C20 | −0.6 (4) |
| C5—C1—C6—N7 | −165.6 (2) | C18—C19—C20—C21 | −0.5 (4) |
| N2—C1—C9—C10 | −23.9 (3) | C18—C19—C20—Br1 | −179.2 (2) |
| C5—C1—C9—C10 | 89.4 (3) | C19—C20—C21—C22 | 1.2 (4) |
| C6—C1—C9—C10 | −149.0 (2) | Br1—C20—C21—C22 | 179.9 (2) |
| N2—C1—C9—C14 | 161.4 (2) | C20—C21—C22—C17 | −0.8 (4) |
| C5—C1—C9—C14 | −85.3 (3) | C18—C17—C22—C21 | −0.3 (4) |
| C6—C1—C9—C14 | 36.3 (3) | C15—C17—C22—C21 | −174.0 (2) |
| C14—C9—C10—C11 | −0.6 (4) |
| H··· | ||||
| N7—H7b···O16 | 0.83 (2) | 1.95 (3) | 2.726 (3) | 155 (3) |
| N7—H7a···O8i | 0.86 (3) | 2.00 (3) | 2.861 (3) | 176 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N7—H7 | 0.83 (2) | 1.95 (3) | 2.726 (3) | 155 (3) |
| N7—H7 | 0.86 (3) | 2.00 (3) | 2.861 (3) | 176 (3) |
Symmetry code: (i) .