Literature DB >> 21201906

4-[(5R*,10bR*)-2-Methyl-1,10b-dihydro-pyrazolo[1,5-c][1,3]benzoxazin-5-yl]benzoic acid.

Viktor Kettmann1, Jan Světlík.   

Abstract

In the title compound, C(18)H(16)N(2)O(3), a potential inhibitor of the cyclo-oxygenase-2 isoenzyme, the pyrazoline ring exists in a flattened envelope conformation with one C atom deviating by 0.463 Å from the mean plane of the remaining four atoms. The puckering of the central oxazine ring is more severe, with one N atom and one C atom displaced by 0.235 (6) and 0.370 (2) Å, respectively, on opposite sides of the mean plane defined by the other four atoms; the conformation is that of a half-chair. As a result, the mol-ecule as a whole is not planar. The carboxyl group is involved in an inter-molecular O-H⋯N hydrogen bond, which links the mol-ecules into centrosymmetric dimers.

Entities:  

Year:  2008        PMID: 21201906      PMCID: PMC2960786          DOI: 10.1107/S1600536808003607

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Palomer et al. (2002 ▶); Subbaramaiah et al. (2002 ▶); Světlík et al. (2005 ▶).

Experimental

Crystal data

C18H16N2O3 M = 308.33 Triclinic, a = 6.638 (2) Å b = 10.997 (3) Å c = 11.141 (3) Å α = 70.78 (2)° β = 80.85 (3)° γ = 79.15 (2)° V = 750.1 (4) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 296 (2) K 0.30 × 0.20 × 0.15 mm

Data collection

Siemens P4 diffractometer Absorption correction: none 5341 measured reflections 4312 independent reflections 3216 reflections with I > 2σ(I) R int = 0.019 3 standard reflections every 97 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.152 S = 1.01 4312 reflections 210 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.22 e Å−3 Data collection: XSCANS (Siemens, 1991 ▶); cell refinement: XSCANS; data reduction: XSCANS; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808003607/bi2280sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808003607/bi2280Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H16N2O3Z = 2
Mr = 308.33F000 = 324
Triclinic, P1Dx = 1.365 Mg m3
Hall symbol: -P 1Melting point: 477 K
a = 6.638 (2) ÅMo Kα radiation λ = 0.71073 Å
b = 10.997 (3) ÅCell parameters from 20 reflections
c = 11.141 (3) Åθ = 7–18º
α = 70.78 (2)ºµ = 0.09 mm1
β = 80.85 (3)ºT = 296 (2) K
γ = 79.15 (2)ºPrism, colourless
V = 750.1 (4) Å30.30 × 0.20 × 0.15 mm
Siemens P4 diffractometerRint = 0.019
Radiation source: fine-focus sealed tubeθmax = 30.0º
Monochromator: graphiteθmin = 2.0º
T = 296(2) Kh = −1→9
ω/2θ scansk = −14→14
Absorption correction: nonel = −15→15
5341 measured reflections3 standard reflections
4312 independent reflections every 97 reflections
3216 reflections with I > 2σ(I) intensity decay: none
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H-atom parameters constrained
wR(F2) = 0.152  w = 1/[σ2(Fo2) + (0.0853P)2 + 0.0987P] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max = 0.001
4312 reflectionsΔρmax = 0.29 e Å3
210 parametersΔρmin = −0.22 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3065 (2)0.63515 (13)0.03856 (13)0.0364 (3)
H1A0.33690.6320−0.04850.044*
H1B0.43380.61490.07800.044*
C20.1553 (2)0.54630 (12)0.11427 (12)0.0324 (3)
N30.01255 (17)0.59887 (10)0.18002 (10)0.0314 (2)
N40.05040 (17)0.72620 (10)0.16410 (10)0.0304 (2)
C5−0.1328 (2)0.81721 (13)0.17228 (12)0.0342 (3)
H5−0.09110.89760.17360.041*
O6−0.25382 (16)0.84950 (11)0.06661 (9)0.0440 (3)
C7−0.1451 (2)0.87381 (13)−0.05137 (12)0.0371 (3)
C8−0.2589 (3)0.93655 (15)−0.15442 (14)0.0479 (4)
H8−0.39990.9630−0.14090.057*
C9−0.1623 (3)0.95933 (18)−0.27641 (16)0.0586 (5)
H9−0.23811.0010−0.34580.070*
C100.0466 (3)0.92058 (17)−0.29635 (15)0.0560 (5)
H100.11160.9354−0.37920.067*
C110.1589 (3)0.86000 (14)−0.19372 (13)0.0449 (4)
H110.30030.8352−0.20790.054*
C120.0646 (2)0.83525 (12)−0.06896 (12)0.0347 (3)
C130.1871 (2)0.76641 (13)0.04385 (12)0.0330 (3)
H130.28080.82220.05100.040*
C140.1724 (2)0.40903 (14)0.11858 (15)0.0418 (3)
H14A0.29250.35980.15890.063*
H14B0.18400.40440.03320.063*
H14C0.05170.37370.16650.063*
C15−0.2727 (2)0.76809 (12)0.29245 (12)0.0329 (3)
C16−0.2086 (2)0.75161 (17)0.40981 (14)0.0448 (4)
H16−0.08300.77520.41370.054*
C17−0.3307 (3)0.70033 (17)0.52093 (14)0.0462 (4)
H17−0.28650.68900.59950.055*
C18−0.5184 (2)0.66557 (13)0.51636 (12)0.0342 (3)
C19−0.5837 (2)0.68431 (14)0.39930 (13)0.0374 (3)
H19−0.71030.66210.39520.045*
C20−0.4614 (2)0.73595 (14)0.28820 (13)0.0381 (3)
H20−0.50700.74920.20960.046*
C21−0.6403 (2)0.60087 (13)0.63696 (13)0.0361 (3)
O7−0.5895 (2)0.58142 (13)0.74163 (10)0.0520 (3)
O8−0.80628 (16)0.56450 (11)0.61698 (10)0.0454 (3)
H8A−0.85710.51790.68450.068*
U11U22U33U12U13U23
C10.0382 (7)0.0364 (7)0.0318 (6)−0.0088 (5)0.0038 (5)−0.0084 (5)
C20.0362 (6)0.0317 (6)0.0286 (6)−0.0074 (5)−0.0017 (5)−0.0077 (5)
N30.0364 (6)0.0285 (5)0.0281 (5)−0.0088 (4)−0.0002 (4)−0.0065 (4)
N40.0362 (5)0.0290 (5)0.0256 (5)−0.0104 (4)0.0017 (4)−0.0072 (4)
C50.0423 (7)0.0310 (6)0.0282 (6)−0.0086 (5)0.0016 (5)−0.0082 (5)
O60.0434 (5)0.0498 (6)0.0273 (5)−0.0018 (5)−0.0005 (4)−0.0009 (4)
C70.0514 (8)0.0290 (6)0.0273 (6)−0.0098 (6)−0.0004 (5)−0.0034 (5)
C80.0585 (9)0.0417 (8)0.0359 (7)−0.0042 (7)−0.0097 (7)−0.0015 (6)
C90.0890 (14)0.0478 (9)0.0316 (7)−0.0059 (9)−0.0143 (8)−0.0009 (6)
C100.0856 (13)0.0474 (9)0.0279 (7)−0.0115 (9)0.0037 (8)−0.0058 (6)
C110.0624 (9)0.0362 (7)0.0313 (7)−0.0126 (7)0.0087 (6)−0.0072 (5)
C120.0507 (8)0.0253 (6)0.0270 (6)−0.0126 (5)0.0018 (5)−0.0055 (4)
C130.0368 (6)0.0331 (6)0.0288 (6)−0.0134 (5)0.0036 (5)−0.0079 (5)
C140.0464 (8)0.0351 (7)0.0449 (8)−0.0074 (6)−0.0004 (6)−0.0149 (6)
C150.0403 (7)0.0287 (6)0.0276 (6)−0.0059 (5)0.0024 (5)−0.0081 (5)
C160.0447 (8)0.0600 (9)0.0340 (7)−0.0227 (7)0.0018 (6)−0.0147 (6)
C170.0524 (9)0.0628 (10)0.0270 (6)−0.0203 (7)−0.0002 (6)−0.0139 (6)
C180.0396 (7)0.0322 (6)0.0289 (6)−0.0055 (5)0.0031 (5)−0.0098 (5)
C190.0359 (7)0.0410 (7)0.0329 (6)−0.0087 (5)−0.0014 (5)−0.0076 (5)
C200.0426 (7)0.0417 (7)0.0277 (6)−0.0085 (6)−0.0042 (5)−0.0063 (5)
C210.0405 (7)0.0337 (6)0.0311 (6)−0.0055 (5)0.0038 (5)−0.0097 (5)
O70.0637 (7)0.0646 (7)0.0285 (5)−0.0204 (6)0.0024 (5)−0.0126 (5)
O80.0457 (6)0.0506 (6)0.0336 (5)−0.0165 (5)0.0032 (4)−0.0029 (4)
C1—C21.4934 (19)C11—C121.3915 (19)
C1—C131.5249 (19)C11—H110.930
C1—H1A0.970C12—C131.5101 (19)
C1—H1B0.970C13—H130.980
C2—N31.2730 (17)C14—H14A0.960
C2—C141.4776 (19)C14—H14B0.960
N3—N41.4178 (15)C14—H14C0.960
N4—C51.4335 (18)C15—C201.376 (2)
N4—C131.4793 (17)C15—C161.3839 (19)
C5—O61.4409 (17)C16—C171.379 (2)
C5—C151.5047 (18)C16—H160.930
C5—H50.980C17—C181.384 (2)
O6—C71.3637 (17)C17—H170.930
C7—C121.379 (2)C18—C191.3783 (19)
C7—C81.387 (2)C18—C211.4856 (19)
C8—C91.371 (2)C19—C201.380 (2)
C8—H80.930C19—H190.930
C9—C101.377 (3)C20—H200.930
C9—H90.930C21—O71.2053 (17)
C10—C111.375 (2)C21—O81.3140 (18)
C10—H100.930O8—H8A0.820
C2—C1—C13100.79 (11)C7—C12—C13120.90 (12)
C2—C1—H1A111.6C11—C12—C13121.16 (14)
C13—C1—H1A111.6N4—C13—C12111.46 (11)
C2—C1—H1B111.6N4—C13—C1100.98 (10)
C13—C1—H1B111.6C12—C13—C1112.93 (11)
H1A—C1—H1B109.4N4—C13—H13110.4
N3—C2—C14122.55 (13)C12—C13—H13110.4
N3—C2—C1113.23 (12)C1—C13—H13110.4
C14—C2—C1124.16 (12)C2—C14—H14A109.5
C2—N3—N4108.71 (11)C2—C14—H14B109.5
N3—N4—C5114.05 (10)H14A—C14—H14B109.5
N3—N4—C13107.26 (9)C2—C14—H14C109.5
C5—N4—C13114.20 (10)H14A—C14—H14C109.5
N4—C5—O6113.73 (11)H14B—C14—H14C109.5
N4—C5—C15112.11 (11)C20—C15—C16119.21 (13)
O6—C5—C15106.99 (11)C20—C15—C5121.22 (12)
N4—C5—H5107.9C16—C15—C5119.55 (13)
O6—C5—H5107.9C17—C16—C15120.12 (14)
C15—C5—H5107.9C17—C16—H16119.9
C7—O6—C5115.49 (11)C15—C16—H16119.9
O6—C7—C12122.64 (12)C16—C17—C18120.50 (13)
O6—C7—C8116.04 (14)C16—C17—H17119.8
C12—C7—C8121.29 (14)C18—C17—H17119.8
C9—C8—C7119.60 (17)C19—C18—C17119.28 (13)
C9—C8—H8120.2C19—C18—C21120.86 (13)
C7—C8—H8120.2C17—C18—C21119.74 (13)
C8—C9—C10120.15 (16)C18—C19—C20120.10 (13)
C8—C9—H9119.9C18—C19—H19119.9
C10—C9—H9119.9C20—C19—H19119.9
C11—C10—C9119.92 (15)C15—C20—C19120.77 (13)
C11—C10—H10120.0C15—C20—H20119.6
C9—C10—H10120.0C19—C20—H20119.6
C10—C11—C12121.10 (16)O7—C21—O8123.78 (13)
C10—C11—H11119.4O7—C21—C18123.50 (14)
C12—C11—H11119.4O8—C21—C18112.71 (12)
C7—C12—C11117.93 (14)C21—O8—H8A109.5
C13—C1—C2—N3−15.79 (15)N3—N4—C13—C1−29.67 (12)
C13—C1—C2—C14166.98 (12)C5—N4—C13—C1−157.08 (11)
C14—C2—N3—N4174.46 (11)C7—C12—C13—N411.07 (17)
C1—C2—N3—N4−2.82 (15)C11—C12—C13—N4−167.94 (12)
C2—N3—N4—C5148.89 (11)C7—C12—C13—C1123.94 (13)
C2—N3—N4—C1321.40 (13)C11—C12—C13—C1−55.08 (17)
N3—N4—C5—O6−68.94 (13)C2—C1—C13—N426.12 (12)
C13—N4—C5—O654.89 (15)C2—C1—C13—C12−93.01 (13)
N3—N4—C5—C1552.60 (14)N4—C5—C15—C20−112.18 (15)
C13—N4—C5—C15176.43 (10)O6—C5—C15—C2013.15 (17)
N4—C5—O6—C7−44.40 (16)N4—C5—C15—C1666.12 (17)
C15—C5—O6—C7−168.75 (11)O6—C5—C15—C16−168.55 (12)
C5—O6—C7—C1217.97 (19)C20—C15—C16—C171.7 (2)
C5—O6—C7—C8−164.03 (12)C5—C15—C16—C17−176.64 (14)
O6—C7—C8—C9−177.12 (14)C15—C16—C17—C18−0.4 (3)
C12—C7—C8—C90.9 (2)C16—C17—C18—C19−0.8 (2)
C7—C8—C9—C10−0.3 (3)C16—C17—C18—C21175.18 (15)
C8—C9—C10—C11−0.6 (3)C17—C18—C19—C200.7 (2)
C9—C10—C11—C120.9 (3)C21—C18—C19—C20−175.28 (13)
O6—C7—C12—C11177.24 (13)C16—C15—C20—C19−1.9 (2)
C8—C7—C12—C11−0.7 (2)C5—C15—C20—C19176.45 (13)
O6—C7—C12—C13−1.8 (2)C18—C19—C20—C150.7 (2)
C8—C7—C12—C13−179.70 (13)C19—C18—C21—O7179.54 (14)
C10—C11—C12—C7−0.2 (2)C17—C18—C21—O73.6 (2)
C10—C11—C12—C13178.82 (14)C19—C18—C21—O81.05 (19)
N3—N4—C13—C1290.51 (12)C17—C18—C21—O8−174.89 (13)
C5—N4—C13—C12−36.89 (15)
D—H···AD—HH···AD···AD—H···A
O8—H8A···N3i0.821.932.7356 (17)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O8—H8A⋯N3i0.821.932.7356 (17)168

Symmetry code: (i) .

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