Literature DB >> 21201891

8-Hydr-oxy-8-phenyl-2,3,7,8-tetra-hydro-6H-1,4-dioxino[2,3-f]isoindol-6-one.

Viktor A Tafeenko1, Leonid A Aslanov, Mahmud I Khasanov, Sergei S Mochalov.   

Abstract

In the title compound, C(16)H(13)NO(4), the indole system is essentially planar, whereas the dioxane ring adopts a twist conformation. The mol-ecules are linked into chains by -O- H⋯O=C- hydrogen bonds and these chains are linked into rods by means of N-H⋯O hydrogen bonds. Exept for weak C-H⋯O inter-actions between the rods, no other inter-molecular contacts of inter-est are present.

Entities:  

Year:  2008        PMID: 21201891      PMCID: PMC2960860          DOI: 10.1107/S1600536808003012

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of the appropriate nitrile hydrolysis, see: Moorthy & Singhal (2005 ▶).

Experimental

Crystal data

C16H13NO4 M = 283.27 Monoclinic, a = 8.6001 (17) Å b = 27.005 (5) Å c = 5.7221 (5) Å β = 92.602 (10)° V = 1327.6 (4) Å3 Z = 4 Cu Kα radiation μ = 0.85 mm−1 T = 291 (2) K 0.08 × 0.06 × 0.04 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: none 2892 measured reflections 2653 independent reflections 1784 reflections with I > 2σ(I) R int = 0.025 2 standard reflections frequency: 120 min intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.147 S = 1.05 2653 reflections 192 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2000 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808003012/rk2073sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808003012/rk2073Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H13NO4F000 = 592
Mr = 283.27Dx = 1.417 Mg m3
Monoclinic, P21/cMelting point = 485–486 K
Hall symbol: -P 2ybcCu Kα radiation λ = 1.54184 Å
a = 8.6001 (17) ÅCell parameters from 25 reflections
b = 27.005 (5) Åθ = 26–42º
c = 5.7221 (5) ŵ = 0.85 mm1
β = 92.602 (10)ºT = 291 (2) K
V = 1327.6 (4) Å3Prism, colorless
Z = 40.08 × 0.06 × 0.04 mm
Enraf–Nonius CAD-4 diffractometerRint = 0.025
Radiation source: fine-focus sealed tubeθmax = 73.9º
Monochromator: graphiteθmin = 3.3º
T = 291(2) Kh = −10→10
Non–profiled ω scansk = 0→32
Absorption correction: nonel = 0→7
2892 measured reflections2 standard reflections
2653 independent reflections every 120 min
1784 reflections with I > 2σ(I) intensity decay: none
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.054  w = 1/[σ2(Fo2) + (0.061P)2 + 0.4104P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.147(Δ/σ)max < 0.001
S = 1.05Δρmax = 0.23 e Å3
2653 reflectionsΔρmin = −0.24 e Å3
192 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0051 (6)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.3338 (2)0.50617 (7)1.1457 (3)0.0654 (5)
O20.3093 (2)0.70474 (6)0.9980 (3)0.0549 (5)
H20.23700.69061.05850.082*
O30.1250 (2)0.65694 (7)0.3005 (3)0.0568 (5)
O40.1351 (3)0.48070 (7)0.7532 (4)0.0737 (6)
N70.2877 (2)0.68919 (8)0.5922 (3)0.0498 (5)
H70.29720.71820.53210.060*
C20.2445 (4)0.46150 (12)1.1374 (6)0.0810 (10)
H2A0.14630.46711.21000.097*
H2B0.30030.43601.22590.097*
C30.2138 (5)0.44427 (12)0.8942 (7)0.0878 (11)
H3A0.31170.43610.82600.105*
H3B0.15100.41440.89560.105*
C50.1581 (3)0.56216 (9)0.6119 (4)0.0536 (6)
H50.09370.55410.48260.064*
C60.2011 (3)0.65333 (9)0.4881 (4)0.0467 (6)
C80.3642 (3)0.67510 (9)0.8154 (4)0.0455 (6)
C90.3521 (3)0.58711 (9)1.0021 (4)0.0498 (6)
H90.41630.59551.13130.060*
C100.2183 (3)0.60935 (9)0.6404 (4)0.0467 (6)
C110.3138 (3)0.62151 (9)0.8321 (4)0.0446 (5)
C120.1965 (3)0.52745 (10)0.7811 (5)0.0542 (6)
C130.2925 (3)0.53960 (9)0.9759 (4)0.0510 (6)
C140.5399 (3)0.68000 (9)0.8127 (4)0.0458 (6)
C150.6197 (3)0.66247 (10)0.6231 (4)0.0555 (6)
H150.56360.64990.49370.067*
C160.7790 (3)0.66338 (11)0.6228 (5)0.0645 (7)
H160.83010.65140.49460.077*
C170.8631 (4)0.68214 (12)0.8136 (5)0.0683 (8)
H170.97120.68290.81430.082*
C180.7876 (3)0.69959 (11)1.0011 (5)0.0678 (8)
H180.84490.71211.12970.081*
C190.6268 (3)0.69889 (10)1.0022 (4)0.0561 (7)
H190.57670.71121.13070.067*
U11U22U33U12U13U23
O10.0765 (13)0.0525 (11)0.0666 (12)−0.0020 (9)−0.0039 (10)0.0182 (9)
O20.0654 (12)0.0516 (10)0.0488 (10)−0.0046 (8)0.0138 (8)−0.0083 (8)
O30.0575 (11)0.0718 (12)0.0406 (9)−0.0020 (9)−0.0038 (8)0.0054 (8)
O40.0847 (15)0.0480 (11)0.0870 (15)−0.0136 (10)−0.0131 (12)0.0040 (10)
N70.0603 (13)0.0463 (11)0.0421 (10)−0.0032 (9)−0.0049 (9)0.0071 (9)
C20.097 (3)0.0529 (18)0.093 (2)−0.0106 (16)0.0003 (19)0.0230 (17)
C30.107 (3)0.0513 (18)0.104 (3)−0.0006 (18)−0.011 (2)0.0065 (18)
C50.0578 (15)0.0547 (15)0.0480 (13)−0.0073 (12)−0.0020 (11)−0.0051 (12)
C60.0464 (13)0.0567 (15)0.0371 (11)0.0029 (11)0.0021 (10)0.0008 (10)
C80.0575 (14)0.0446 (13)0.0343 (11)−0.0017 (11)−0.0001 (10)−0.0005 (9)
C90.0564 (14)0.0511 (14)0.0417 (12)−0.0030 (11)−0.0005 (10)0.0034 (11)
C100.0512 (13)0.0500 (14)0.0388 (11)−0.0035 (11)0.0017 (10)−0.0004 (10)
C110.0505 (13)0.0459 (13)0.0373 (12)−0.0014 (10)0.0022 (10)0.0010 (10)
C120.0608 (16)0.0454 (14)0.0565 (15)−0.0078 (12)0.0027 (12)−0.0041 (12)
C130.0556 (14)0.0469 (14)0.0506 (13)−0.0001 (11)0.0042 (11)0.0074 (11)
C140.0567 (14)0.0436 (13)0.0370 (11)−0.0025 (11)0.0011 (10)0.0021 (10)
C150.0610 (16)0.0649 (17)0.0407 (12)−0.0025 (13)0.0027 (11)−0.0039 (12)
C160.0606 (16)0.074 (2)0.0594 (17)0.0007 (14)0.0109 (13)−0.0030 (15)
C170.0570 (16)0.076 (2)0.0716 (19)−0.0002 (14)0.0011 (14)0.0022 (16)
C180.0635 (18)0.076 (2)0.0624 (17)−0.0039 (15)−0.0152 (14)−0.0050 (15)
C190.0672 (17)0.0599 (16)0.0404 (12)0.0001 (13)−0.0040 (11)−0.0032 (11)
O1—C131.362 (3)C8—C111.515 (3)
O1—C21.430 (4)C8—C141.518 (3)
O2—C81.415 (3)C9—C111.374 (3)
O2—H20.8200C9—C131.387 (3)
O3—C61.236 (3)C9—H90.9300
O4—C121.375 (3)C10—C111.380 (3)
O4—C31.424 (4)C12—C131.396 (3)
N7—C61.344 (3)C14—C191.386 (3)
N7—C81.460 (3)C14—C151.393 (3)
N7—H70.8600C15—C161.370 (4)
C2—C31.480 (5)C15—H150.9300
C2—H2A0.9700C16—C171.378 (4)
C2—H2B0.9700C16—H160.9300
C3—H3A0.9700C17—C181.363 (4)
C3—H3B0.9700C17—H170.9300
C5—C121.376 (4)C18—C191.384 (4)
C5—C101.382 (3)C18—H180.9300
C5—H50.9300C19—H190.9300
C6—C101.477 (3)
C13—O1—C2114.4 (2)C13—C9—H9120.9
C8—O2—H2109.5C11—C10—C5121.3 (2)
C12—O4—C3113.5 (2)C11—C10—C6108.5 (2)
C6—N7—C8114.7 (2)C5—C10—C6130.2 (2)
C6—N7—H7122.6C9—C11—C10121.1 (2)
C8—N7—H7122.6C9—C11—C8129.1 (2)
O1—C2—C3111.7 (3)C10—C11—C8109.8 (2)
O1—C2—H2A109.3O4—C12—C5117.7 (2)
C3—C2—H2A109.3O4—C12—C13121.2 (2)
O1—C2—H2B109.3C5—C12—C13121.0 (2)
C3—C2—H2B109.3O1—C13—C9116.9 (2)
H2A—C2—H2B107.9O1—C13—C12122.7 (2)
O4—C3—C2112.1 (3)C9—C13—C12120.4 (2)
O4—C3—H3A109.2C19—C14—C15117.8 (2)
C2—C3—H3A109.2C19—C14—C8121.7 (2)
O4—C3—H3B109.2C15—C14—C8120.3 (2)
C2—C3—H3B109.2C16—C15—C14121.5 (3)
H3A—C3—H3B107.9C16—C15—H15119.2
C12—C5—C10117.9 (2)C14—C15—H15119.2
C12—C5—H5121.0C15—C16—C17119.6 (3)
C10—C5—H5121.0C15—C16—H16120.2
O3—C6—N7126.1 (2)C17—C16—H16120.2
O3—C6—C10127.7 (2)C18—C17—C16119.9 (3)
N7—C6—C10106.23 (19)C18—C17—H17120.0
O2—C8—N7110.3 (2)C16—C17—H17120.0
O2—C8—C11112.82 (19)C17—C18—C19120.7 (3)
N7—C8—C11100.69 (18)C17—C18—H18119.7
O2—C8—C14108.89 (19)C19—C18—H18119.7
N7—C8—C14112.20 (19)C18—C19—C14120.4 (3)
C11—C8—C14111.8 (2)C18—C19—H19119.8
C11—C9—C13118.2 (2)C14—C19—H19119.8
C11—C9—H9120.9
C13—O1—C2—C340.4 (4)C3—O4—C12—C5162.9 (3)
C12—O4—C3—C245.2 (4)C3—O4—C12—C13−18.1 (4)
O1—C2—C3—O4−57.6 (4)C10—C5—C12—O4179.4 (2)
C8—N7—C6—O3179.2 (2)C10—C5—C12—C130.3 (4)
C8—N7—C6—C10−1.7 (3)C2—O1—C13—C9167.3 (3)
C6—N7—C8—O2−117.5 (2)C2—O1—C13—C12−13.5 (4)
C6—N7—C8—C111.8 (3)C11—C9—C13—O1179.3 (2)
C6—N7—C8—C14120.9 (2)C11—C9—C13—C120.1 (4)
C12—C5—C10—C11−0.1 (4)O4—C12—C13—O11.5 (4)
C12—C5—C10—C6178.4 (3)C5—C12—C13—O1−179.5 (2)
O3—C6—C10—C11179.9 (2)O4—C12—C13—C9−179.3 (2)
N7—C6—C10—C110.8 (3)C5—C12—C13—C9−0.4 (4)
O3—C6—C10—C51.3 (4)O2—C8—C14—C1916.7 (3)
N7—C6—C10—C5−177.8 (3)N7—C8—C14—C19139.1 (2)
C13—C9—C11—C100.2 (4)C11—C8—C14—C19−108.6 (3)
C13—C9—C11—C8−178.9 (2)O2—C8—C14—C15−167.4 (2)
C5—C10—C11—C9−0.2 (4)N7—C8—C14—C15−45.1 (3)
C6—C10—C11—C9−178.9 (2)C11—C8—C14—C1567.2 (3)
C5—C10—C11—C8179.0 (2)C19—C14—C15—C160.5 (4)
C6—C10—C11—C80.3 (3)C8—C14—C15—C16−175.6 (2)
O2—C8—C11—C9−64.5 (3)C14—C15—C16—C17−0.2 (4)
N7—C8—C11—C9178.0 (2)C15—C16—C17—C180.1 (5)
C14—C8—C11—C958.6 (3)C16—C17—C18—C19−0.3 (5)
O2—C8—C11—C10116.3 (2)C17—C18—C19—C140.5 (5)
N7—C8—C11—C10−1.2 (3)C15—C14—C19—C18−0.6 (4)
C14—C8—C11—C10−120.5 (2)C8—C14—C19—C18175.3 (2)
D—H···AD—HH···AD···AD—H···A
O2—H2···O3i0.821.952.725 (3)158
N7—H7···O2ii0.862.092.922 (3)161
C5—H5···O4iii0.932.523.404 (3)160
C19—H19···O20.932.402.734 (4)101
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯O3i0.821.952.725 (3)158
N7—H7⋯O2ii0.862.092.922 (3)161
C5—H5⋯O4iii0.932.523.404 (3)160
C19—H19⋯O20.932.402.734 (4)101

Symmetry codes: (i) ; (ii) ; (iii) .

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