| Literature DB >> 21201891 |
Viktor A Tafeenko1, Leonid A Aslanov, Mahmud I Khasanov, Sergei S Mochalov.
Abstract
In the title compound, C(16)H(13)NO(4), the indole system is essentially planar, whereas the dioxane ring adopts a twist conformation. The mol-ecules are linked into chains by -O- H⋯O=C- hydrogen bonds and these chains are linked into rods by means of N-H⋯O hydrogen bonds. Exept for weak C-H⋯O inter-actions between the rods, no other inter-molecular contacts of inter-est are present.Entities:
Year: 2008 PMID: 21201891 PMCID: PMC2960860 DOI: 10.1107/S1600536808003012
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H13NO4 | |
| Monoclinic, | Melting point = 485–486 K |
| Hall symbol: -P 2ybc | Cu |
| Cell parameters from 25 reflections | |
| θ = 26–42º | |
| µ = 0.85 mm−1 | |
| β = 92.602 (10)º | |
| Prism, colorless | |
| 0.08 × 0.06 × 0.04 mm |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 73.9º |
| Monochromator: graphite | θmin = 3.3º |
| Non–profiled ω scans | |
| Absorption correction: none | |
| 2892 measured reflections | 2 standard reflections |
| 2653 independent reflections | every 120 min |
| 1784 reflections with | intensity decay: none |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| | |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.23 e Å−3 | |
| 2653 reflections | Δρmin = −0.24 e Å−3 |
| 192 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0051 (6) |
| Secondary atom site location: difference Fourier map |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.3338 (2) | 0.50617 (7) | 1.1457 (3) | 0.0654 (5) | |
| O2 | 0.3093 (2) | 0.70474 (6) | 0.9980 (3) | 0.0549 (5) | |
| H2 | 0.2370 | 0.6906 | 1.0585 | 0.082* | |
| O3 | 0.1250 (2) | 0.65694 (7) | 0.3005 (3) | 0.0568 (5) | |
| O4 | 0.1351 (3) | 0.48070 (7) | 0.7532 (4) | 0.0737 (6) | |
| N7 | 0.2877 (2) | 0.68919 (8) | 0.5922 (3) | 0.0498 (5) | |
| H7 | 0.2972 | 0.7182 | 0.5321 | 0.060* | |
| C2 | 0.2445 (4) | 0.46150 (12) | 1.1374 (6) | 0.0810 (10) | |
| H2A | 0.1463 | 0.4671 | 1.2100 | 0.097* | |
| H2B | 0.3003 | 0.4360 | 1.2259 | 0.097* | |
| C3 | 0.2138 (5) | 0.44427 (12) | 0.8942 (7) | 0.0878 (11) | |
| H3A | 0.3117 | 0.4361 | 0.8260 | 0.105* | |
| H3B | 0.1510 | 0.4144 | 0.8956 | 0.105* | |
| C5 | 0.1581 (3) | 0.56216 (9) | 0.6119 (4) | 0.0536 (6) | |
| H5 | 0.0937 | 0.5541 | 0.4826 | 0.064* | |
| C6 | 0.2011 (3) | 0.65333 (9) | 0.4881 (4) | 0.0467 (6) | |
| C8 | 0.3642 (3) | 0.67510 (9) | 0.8154 (4) | 0.0455 (6) | |
| C9 | 0.3521 (3) | 0.58711 (9) | 1.0021 (4) | 0.0498 (6) | |
| H9 | 0.4163 | 0.5955 | 1.1313 | 0.060* | |
| C10 | 0.2183 (3) | 0.60935 (9) | 0.6404 (4) | 0.0467 (6) | |
| C11 | 0.3138 (3) | 0.62151 (9) | 0.8321 (4) | 0.0446 (5) | |
| C12 | 0.1965 (3) | 0.52745 (10) | 0.7811 (5) | 0.0542 (6) | |
| C13 | 0.2925 (3) | 0.53960 (9) | 0.9759 (4) | 0.0510 (6) | |
| C14 | 0.5399 (3) | 0.68000 (9) | 0.8127 (4) | 0.0458 (6) | |
| C15 | 0.6197 (3) | 0.66247 (10) | 0.6231 (4) | 0.0555 (6) | |
| H15 | 0.5636 | 0.6499 | 0.4937 | 0.067* | |
| C16 | 0.7790 (3) | 0.66338 (11) | 0.6228 (5) | 0.0645 (7) | |
| H16 | 0.8301 | 0.6514 | 0.4946 | 0.077* | |
| C17 | 0.8631 (4) | 0.68214 (12) | 0.8136 (5) | 0.0683 (8) | |
| H17 | 0.9712 | 0.6829 | 0.8143 | 0.082* | |
| C18 | 0.7876 (3) | 0.69959 (11) | 1.0011 (5) | 0.0678 (8) | |
| H18 | 0.8449 | 0.7121 | 1.1297 | 0.081* | |
| C19 | 0.6268 (3) | 0.69889 (10) | 1.0022 (4) | 0.0561 (7) | |
| H19 | 0.5767 | 0.7112 | 1.1307 | 0.067* |
| O1 | 0.0765 (13) | 0.0525 (11) | 0.0666 (12) | −0.0020 (9) | −0.0039 (10) | 0.0182 (9) |
| O2 | 0.0654 (12) | 0.0516 (10) | 0.0488 (10) | −0.0046 (8) | 0.0138 (8) | −0.0083 (8) |
| O3 | 0.0575 (11) | 0.0718 (12) | 0.0406 (9) | −0.0020 (9) | −0.0038 (8) | 0.0054 (8) |
| O4 | 0.0847 (15) | 0.0480 (11) | 0.0870 (15) | −0.0136 (10) | −0.0131 (12) | 0.0040 (10) |
| N7 | 0.0603 (13) | 0.0463 (11) | 0.0421 (10) | −0.0032 (9) | −0.0049 (9) | 0.0071 (9) |
| C2 | 0.097 (3) | 0.0529 (18) | 0.093 (2) | −0.0106 (16) | 0.0003 (19) | 0.0230 (17) |
| C3 | 0.107 (3) | 0.0513 (18) | 0.104 (3) | −0.0006 (18) | −0.011 (2) | 0.0065 (18) |
| C5 | 0.0578 (15) | 0.0547 (15) | 0.0480 (13) | −0.0073 (12) | −0.0020 (11) | −0.0051 (12) |
| C6 | 0.0464 (13) | 0.0567 (15) | 0.0371 (11) | 0.0029 (11) | 0.0021 (10) | 0.0008 (10) |
| C8 | 0.0575 (14) | 0.0446 (13) | 0.0343 (11) | −0.0017 (11) | −0.0001 (10) | −0.0005 (9) |
| C9 | 0.0564 (14) | 0.0511 (14) | 0.0417 (12) | −0.0030 (11) | −0.0005 (10) | 0.0034 (11) |
| C10 | 0.0512 (13) | 0.0500 (14) | 0.0388 (11) | −0.0035 (11) | 0.0017 (10) | −0.0004 (10) |
| C11 | 0.0505 (13) | 0.0459 (13) | 0.0373 (12) | −0.0014 (10) | 0.0022 (10) | 0.0010 (10) |
| C12 | 0.0608 (16) | 0.0454 (14) | 0.0565 (15) | −0.0078 (12) | 0.0027 (12) | −0.0041 (12) |
| C13 | 0.0556 (14) | 0.0469 (14) | 0.0506 (13) | −0.0001 (11) | 0.0042 (11) | 0.0074 (11) |
| C14 | 0.0567 (14) | 0.0436 (13) | 0.0370 (11) | −0.0025 (11) | 0.0011 (10) | 0.0021 (10) |
| C15 | 0.0610 (16) | 0.0649 (17) | 0.0407 (12) | −0.0025 (13) | 0.0027 (11) | −0.0039 (12) |
| C16 | 0.0606 (16) | 0.074 (2) | 0.0594 (17) | 0.0007 (14) | 0.0109 (13) | −0.0030 (15) |
| C17 | 0.0570 (16) | 0.076 (2) | 0.0716 (19) | −0.0002 (14) | 0.0011 (14) | 0.0022 (16) |
| C18 | 0.0635 (18) | 0.076 (2) | 0.0624 (17) | −0.0039 (15) | −0.0152 (14) | −0.0050 (15) |
| C19 | 0.0672 (17) | 0.0599 (16) | 0.0404 (12) | 0.0001 (13) | −0.0040 (11) | −0.0032 (11) |
| O1—C13 | 1.362 (3) | C8—C11 | 1.515 (3) |
| O1—C2 | 1.430 (4) | C8—C14 | 1.518 (3) |
| O2—C8 | 1.415 (3) | C9—C11 | 1.374 (3) |
| O2—H2 | 0.8200 | C9—C13 | 1.387 (3) |
| O3—C6 | 1.236 (3) | C9—H9 | 0.9300 |
| O4—C12 | 1.375 (3) | C10—C11 | 1.380 (3) |
| O4—C3 | 1.424 (4) | C12—C13 | 1.396 (3) |
| N7—C6 | 1.344 (3) | C14—C19 | 1.386 (3) |
| N7—C8 | 1.460 (3) | C14—C15 | 1.393 (3) |
| N7—H7 | 0.8600 | C15—C16 | 1.370 (4) |
| C2—C3 | 1.480 (5) | C15—H15 | 0.9300 |
| C2—H2A | 0.9700 | C16—C17 | 1.378 (4) |
| C2—H2B | 0.9700 | C16—H16 | 0.9300 |
| C3—H3A | 0.9700 | C17—C18 | 1.363 (4) |
| C3—H3B | 0.9700 | C17—H17 | 0.9300 |
| C5—C12 | 1.376 (4) | C18—C19 | 1.384 (4) |
| C5—C10 | 1.382 (3) | C18—H18 | 0.9300 |
| C5—H5 | 0.9300 | C19—H19 | 0.9300 |
| C6—C10 | 1.477 (3) | ||
| C13—O1—C2 | 114.4 (2) | C13—C9—H9 | 120.9 |
| C8—O2—H2 | 109.5 | C11—C10—C5 | 121.3 (2) |
| C12—O4—C3 | 113.5 (2) | C11—C10—C6 | 108.5 (2) |
| C6—N7—C8 | 114.7 (2) | C5—C10—C6 | 130.2 (2) |
| C6—N7—H7 | 122.6 | C9—C11—C10 | 121.1 (2) |
| C8—N7—H7 | 122.6 | C9—C11—C8 | 129.1 (2) |
| O1—C2—C3 | 111.7 (3) | C10—C11—C8 | 109.8 (2) |
| O1—C2—H2A | 109.3 | O4—C12—C5 | 117.7 (2) |
| C3—C2—H2A | 109.3 | O4—C12—C13 | 121.2 (2) |
| O1—C2—H2B | 109.3 | C5—C12—C13 | 121.0 (2) |
| C3—C2—H2B | 109.3 | O1—C13—C9 | 116.9 (2) |
| H2A—C2—H2B | 107.9 | O1—C13—C12 | 122.7 (2) |
| O4—C3—C2 | 112.1 (3) | C9—C13—C12 | 120.4 (2) |
| O4—C3—H3A | 109.2 | C19—C14—C15 | 117.8 (2) |
| C2—C3—H3A | 109.2 | C19—C14—C8 | 121.7 (2) |
| O4—C3—H3B | 109.2 | C15—C14—C8 | 120.3 (2) |
| C2—C3—H3B | 109.2 | C16—C15—C14 | 121.5 (3) |
| H3A—C3—H3B | 107.9 | C16—C15—H15 | 119.2 |
| C12—C5—C10 | 117.9 (2) | C14—C15—H15 | 119.2 |
| C12—C5—H5 | 121.0 | C15—C16—C17 | 119.6 (3) |
| C10—C5—H5 | 121.0 | C15—C16—H16 | 120.2 |
| O3—C6—N7 | 126.1 (2) | C17—C16—H16 | 120.2 |
| O3—C6—C10 | 127.7 (2) | C18—C17—C16 | 119.9 (3) |
| N7—C6—C10 | 106.23 (19) | C18—C17—H17 | 120.0 |
| O2—C8—N7 | 110.3 (2) | C16—C17—H17 | 120.0 |
| O2—C8—C11 | 112.82 (19) | C17—C18—C19 | 120.7 (3) |
| N7—C8—C11 | 100.69 (18) | C17—C18—H18 | 119.7 |
| O2—C8—C14 | 108.89 (19) | C19—C18—H18 | 119.7 |
| N7—C8—C14 | 112.20 (19) | C18—C19—C14 | 120.4 (3) |
| C11—C8—C14 | 111.8 (2) | C18—C19—H19 | 119.8 |
| C11—C9—C13 | 118.2 (2) | C14—C19—H19 | 119.8 |
| C11—C9—H9 | 120.9 | ||
| C13—O1—C2—C3 | 40.4 (4) | C3—O4—C12—C5 | 162.9 (3) |
| C12—O4—C3—C2 | 45.2 (4) | C3—O4—C12—C13 | −18.1 (4) |
| O1—C2—C3—O4 | −57.6 (4) | C10—C5—C12—O4 | 179.4 (2) |
| C8—N7—C6—O3 | 179.2 (2) | C10—C5—C12—C13 | 0.3 (4) |
| C8—N7—C6—C10 | −1.7 (3) | C2—O1—C13—C9 | 167.3 (3) |
| C6—N7—C8—O2 | −117.5 (2) | C2—O1—C13—C12 | −13.5 (4) |
| C6—N7—C8—C11 | 1.8 (3) | C11—C9—C13—O1 | 179.3 (2) |
| C6—N7—C8—C14 | 120.9 (2) | C11—C9—C13—C12 | 0.1 (4) |
| C12—C5—C10—C11 | −0.1 (4) | O4—C12—C13—O1 | 1.5 (4) |
| C12—C5—C10—C6 | 178.4 (3) | C5—C12—C13—O1 | −179.5 (2) |
| O3—C6—C10—C11 | 179.9 (2) | O4—C12—C13—C9 | −179.3 (2) |
| N7—C6—C10—C11 | 0.8 (3) | C5—C12—C13—C9 | −0.4 (4) |
| O3—C6—C10—C5 | 1.3 (4) | O2—C8—C14—C19 | 16.7 (3) |
| N7—C6—C10—C5 | −177.8 (3) | N7—C8—C14—C19 | 139.1 (2) |
| C13—C9—C11—C10 | 0.2 (4) | C11—C8—C14—C19 | −108.6 (3) |
| C13—C9—C11—C8 | −178.9 (2) | O2—C8—C14—C15 | −167.4 (2) |
| C5—C10—C11—C9 | −0.2 (4) | N7—C8—C14—C15 | −45.1 (3) |
| C6—C10—C11—C9 | −178.9 (2) | C11—C8—C14—C15 | 67.2 (3) |
| C5—C10—C11—C8 | 179.0 (2) | C19—C14—C15—C16 | 0.5 (4) |
| C6—C10—C11—C8 | 0.3 (3) | C8—C14—C15—C16 | −175.6 (2) |
| O2—C8—C11—C9 | −64.5 (3) | C14—C15—C16—C17 | −0.2 (4) |
| N7—C8—C11—C9 | 178.0 (2) | C15—C16—C17—C18 | 0.1 (5) |
| C14—C8—C11—C9 | 58.6 (3) | C16—C17—C18—C19 | −0.3 (5) |
| O2—C8—C11—C10 | 116.3 (2) | C17—C18—C19—C14 | 0.5 (5) |
| N7—C8—C11—C10 | −1.2 (3) | C15—C14—C19—C18 | −0.6 (4) |
| C14—C8—C11—C10 | −120.5 (2) | C8—C14—C19—C18 | 175.3 (2) |
| H··· | ||||
| O2—H2···O3i | 0.82 | 1.95 | 2.725 (3) | 158 |
| N7—H7···O2ii | 0.86 | 2.09 | 2.922 (3) | 161 |
| C5—H5···O4iii | 0.93 | 2.52 | 3.404 (3) | 160 |
| C19—H19···O2 | 0.93 | 2.40 | 2.734 (4) | 101 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2⋯O3i | 0.82 | 1.95 | 2.725 (3) | 158 |
| N7—H7⋯O2ii | 0.86 | 2.09 | 2.922 (3) | 161 |
| C5—H5⋯O4iii | 0.93 | 2.52 | 3.404 (3) | 160 |
| C19—H19⋯O2 | 0.93 | 2.40 | 2.734 (4) | 101 |
Symmetry codes: (i) ; (ii) ; (iii) .