Literature DB >> 21201880

catena-Poly[[bis-[μ-2-(3-pyrid-yl)-1H-benzimidazole]-κN:N;κN:N-disilver(I)]-μ-2,5-dicarboxy-benzene-1,4-dicarboxyl-ato-κO:O].

Jie Chen1.   

Abstract

The title coordination polymer, [Ag(2)(C(10)H(4)O(8))(C(12)n class="Species">H(9)N(3))(2)](n), was prepared by a hydro-thermal method. The Ag(I) atom exists in a strongly distorted trigonal coordination environment. Two Ag(I) ions related by an inversion centre are coordinated by two 2-(3-pyrid-yl)benzimidazole ligands, forming a centrosymmetric cyclic dimer. The bridging bidentate 2,5-dicarboxy-benzene-1,4-dicarboxyl-ate ligand is also located on an inversion centre and connects the binuclear units, generating a one-dimensional polymer. The almost-planar conformation of this ligand allows it to form a strong intra-molecular O-H⋯O hydrogen bond. Finally, inter-molecular N-H⋯O hydrogen bonds aggregate the chains into a three-dimensional framework.

Entities:  

Year:  2008        PMID: 21201880      PMCID: PMC2960835          DOI: 10.1107/S1600536808004984

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Alcalde et al. (1992 ▶); Cao et al. (2002 ▶); Hu et al. (2004 ▶); Li et al. (2003 ▶); Xia et al. (2007 ▶).

Experimental

Crystal data

[Ag2(C10H4O8)(C12H9N3)2] M = 858.32 Monoclinic, a = 4.8940 (11) Å b = 16.011 (4) Å c = 19.077 (4) Å β = 92.393 (3)° V = 1493.6 (6) Å3 Z = 2 Mo Kα radiation μ = 1.38 mm−1 T = 293 (2) K 0.48 × 0.13 × 0.13 mm

Data collection

Rigaku Mercury CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2000 ▶) T min = 0.806, T max = 0.842 11420 measured reflections 3405 independent reflections 3079 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.075 S = 1.07 3405 reflections 230 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.50 e Å−3 Δρmin = −0.85 e Å−3 Data collection: CrystalClear (Rigaku, 2000 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: CrystalStructure (Rigaku, 2000 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808004984/bh2158sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808004984/bh2158Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ag2(C10H4O8)(C12H9N3)2]F000 = 852
Mr = 858.32Dx = 1.909 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3641 reflections
a = 4.8940 (11) Åθ = 2.5–27.5º
b = 16.011 (4) ŵ = 1.38 mm1
c = 19.077 (4) ÅT = 293 (2) K
β = 92.393 (3)ºPrism, colourless
V = 1493.6 (6) Å30.48 × 0.13 × 0.13 mm
Z = 2
Rigaku Mercury CCD diffractometer3405 independent reflections
Radiation source: fine-focus sealed tube3079 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.023
T = 293(2) Kθmax = 27.5º
ω scansθmin = 2.5º
Absorption correction: multi-scan(CrystalClear; Rigaku, 2000)h = −6→6
Tmin = 0.806, Tmax = 0.842k = −20→20
11420 measured reflectionsl = −18→24
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.030H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.075  w = 1/[σ2(Fo2) + (0.0366P)2 + 0.9191P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.005
3405 reflectionsΔρmax = 0.50 e Å3
230 parametersΔρmin = −0.85 e Å3
1 restraintExtinction correction: none
Primary atom site location: structure-invariant direct methods
xyzUiso*/Ueq
Ag10.71244 (4)0.134099 (11)1.018347 (10)0.04125 (9)
C11.1680 (5)−0.15500 (14)1.13812 (13)0.0343 (5)
H1A1.2997−0.19631.13360.041*
C21.0649 (5)−0.14053 (14)1.20320 (14)0.0359 (5)
H2A1.1275−0.17171.24180.043*
C30.8688 (5)−0.07976 (15)1.21087 (12)0.0329 (5)
H3B0.7980−0.06951.25450.039*
C40.7781 (4)−0.03380 (13)1.15231 (12)0.0265 (4)
C50.8913 (5)−0.05275 (13)1.08884 (12)0.0324 (5)
H5A0.8300−0.02321.04930.039*
C60.5728 (4)0.03242 (13)1.15806 (11)0.0264 (4)
C70.3021 (5)0.13812 (13)1.13776 (12)0.0269 (4)
C80.1575 (5)0.20687 (14)1.11051 (13)0.0347 (5)
H8A0.18600.22691.06560.042*
C9−0.0299 (5)0.24392 (16)1.15313 (14)0.0386 (6)
H9A−0.12870.29001.13650.046*
C10−0.0745 (5)0.21380 (16)1.22058 (14)0.0383 (6)
H10A−0.20390.23991.24740.046*
C110.0682 (5)0.14644 (15)1.24842 (13)0.0332 (5)
H11A0.03960.12671.29340.040*
C120.2577 (4)0.10963 (13)1.20541 (11)0.0264 (4)
C130.5075 (5)0.32005 (13)0.96973 (12)0.0322 (5)
C140.4884 (5)0.41435 (13)0.98108 (11)0.0271 (4)
C150.3175 (5)0.47238 (13)0.94531 (11)0.0271 (4)
C160.1144 (5)0.45603 (15)0.88456 (12)0.0320 (5)
C170.3352 (5)0.55568 (14)0.96571 (12)0.0297 (5)
H17A0.22140.59390.94220.036*
N11.0845 (4)−0.11132 (12)1.08101 (11)0.0347 (4)
N20.5015 (4)0.08847 (11)1.10831 (9)0.0273 (4)
N30.4299 (4)0.04296 (11)1.21627 (9)0.0273 (4)
H3A0.44430.01311.25370.033*
O10.6918 (4)0.28180 (11)1.00119 (11)0.0484 (5)
O20.3341 (4)0.28260 (11)0.92949 (12)0.0486 (5)
H2B0.217 (7)0.316 (2)0.912 (2)0.082 (13)*
O30.0298 (4)0.51666 (11)0.84962 (9)0.0440 (4)
O40.0356 (4)0.38153 (11)0.87095 (10)0.0456 (5)
U11U22U33U12U13U23
Ag10.05515 (15)0.02899 (12)0.04086 (13)0.01185 (8)0.01680 (9)0.00789 (7)
C10.0358 (12)0.0225 (10)0.0449 (14)0.0059 (9)0.0042 (10)0.0043 (9)
C20.0383 (13)0.0301 (12)0.0393 (13)0.0058 (10)0.0011 (10)0.0093 (9)
C30.0362 (12)0.0305 (12)0.0320 (12)0.0041 (10)0.0018 (9)0.0010 (9)
C40.0274 (11)0.0187 (9)0.0333 (11)−0.0010 (8)0.0010 (8)−0.0001 (8)
C50.0411 (13)0.0216 (10)0.0347 (12)0.0054 (9)0.0037 (10)0.0026 (8)
C60.0283 (11)0.0205 (10)0.0303 (11)−0.0005 (8)−0.0007 (8)−0.0007 (8)
C70.0263 (11)0.0219 (10)0.0323 (11)−0.0002 (8)−0.0002 (8)−0.0008 (8)
C80.0368 (13)0.0280 (11)0.0386 (13)0.0034 (10)−0.0037 (10)0.0050 (9)
C90.0372 (13)0.0284 (12)0.0492 (15)0.0097 (10)−0.0073 (11)−0.0006 (10)
C100.0324 (12)0.0360 (13)0.0463 (14)0.0081 (10)0.0001 (10)−0.0107 (10)
C110.0319 (12)0.0337 (12)0.0339 (12)0.0015 (9)0.0014 (9)−0.0027 (9)
C120.0259 (11)0.0223 (10)0.0307 (11)0.0005 (8)−0.0023 (8)−0.0012 (8)
C130.0455 (14)0.0189 (10)0.0327 (12)0.0017 (9)0.0057 (10)−0.0001 (8)
C140.0379 (12)0.0173 (9)0.0261 (10)0.0030 (8)0.0037 (9)0.0002 (7)
C150.0347 (12)0.0219 (10)0.0249 (10)0.0022 (9)0.0035 (8)0.0003 (8)
C160.0380 (13)0.0309 (11)0.0269 (11)0.0029 (9)0.0012 (9)−0.0016 (9)
C170.0400 (13)0.0207 (10)0.0282 (11)0.0055 (9)−0.0013 (9)0.0031 (8)
N10.0428 (12)0.0208 (9)0.0410 (11)0.0040 (8)0.0082 (9)0.0028 (8)
N20.0303 (10)0.0220 (9)0.0297 (9)0.0025 (7)0.0020 (7)0.0016 (7)
N30.0304 (10)0.0244 (9)0.0272 (9)0.0038 (7)0.0014 (7)0.0023 (7)
O10.0691 (13)0.0194 (8)0.0554 (11)0.0126 (8)−0.0126 (10)0.0003 (7)
O20.0545 (12)0.0220 (8)0.0680 (13)0.0009 (8)−0.0133 (10)−0.0091 (8)
O30.0638 (12)0.0335 (9)0.0334 (9)0.0062 (9)−0.0137 (8)−0.0009 (7)
O40.0538 (12)0.0345 (9)0.0471 (11)−0.0065 (8)−0.0147 (9)−0.0035 (8)
Ag1—N22.1663 (18)C9—H9A0.9300
Ag1—N1i2.207 (2)C10—C111.379 (3)
Ag1—O12.3889 (18)C10—H10A0.9300
C1—N11.344 (3)C11—C121.394 (3)
C1—C21.379 (4)C11—H11A0.9300
C1—H1A0.9300C12—N31.370 (3)
C2—C31.379 (3)C13—O11.226 (3)
C2—H2A0.9300C13—O21.271 (3)
C3—C41.395 (3)C13—C141.529 (3)
C3—H3B0.9300C14—C17ii1.390 (3)
C4—C51.386 (3)C14—C151.407 (3)
C4—C61.468 (3)C15—C171.391 (3)
C5—N11.344 (3)C15—C161.518 (3)
C5—H5A0.9300C16—O31.239 (3)
C6—N31.347 (3)C16—O41.277 (3)
C6—N21.342 (3)C16—O41.277 (3)
C7—C81.397 (3)C17—H17A0.9300
C7—N21.395 (3)N3—O3iii2.742 (3)
C7—C121.394 (3)N3—H3A0.8600
C8—C91.384 (4)O2—O42.399 (3)
C8—H8A0.9300O2—H2B0.846 (19)
C9—C101.400 (4)
N2—Ag1—N1i150.61 (7)C12—C11—H11A121.9
N2—Ag1—O1115.06 (7)N3—C12—C11131.3 (2)
N1i—Ag1—O193.66 (7)N3—C12—C7106.02 (18)
N1—C1—C2122.1 (2)C11—C12—C7122.7 (2)
N1—C1—H1A118.9O1—C13—O2121.3 (2)
C2—C1—H1A118.9O1—C13—C14118.2 (2)
C3—C2—C1119.8 (2)O2—C13—C14120.5 (2)
C3—C2—H2A120.1C17ii—C14—C15117.68 (19)
C1—C2—H2A120.1C17ii—C14—C13113.86 (19)
C2—C3—C4119.1 (2)C15—C14—C13128.5 (2)
C2—C3—H3B120.4C17—C15—C14117.9 (2)
C4—C3—H3B120.4C17—C15—C16114.22 (19)
C5—C4—C3117.3 (2)C14—C15—C16127.83 (19)
C5—C4—C6121.6 (2)O3—C16—O4122.1 (2)
C3—C4—C6121.1 (2)O3—C16—O4122.1 (2)
N1—C5—C4124.0 (2)O3—C16—C15118.0 (2)
N1—C5—H5A118.0O4—C16—C15119.9 (2)
C4—C5—H5A118.0O4—C16—C15119.9 (2)
N3—C6—N2111.75 (19)C15—C17—C14ii124.4 (2)
N3—C6—C4122.18 (19)C15—C17—H17A117.8
N2—C6—C4126.1 (2)C14ii—C17—H17A117.8
C8—C7—N2130.6 (2)C5—N1—C1117.7 (2)
C8—C7—C12120.4 (2)C5—N1—Ag1i123.69 (16)
N2—C7—C12108.97 (19)C1—N1—Ag1i118.53 (16)
C9—C8—C7117.2 (2)C6—N2—C7105.18 (18)
C9—C8—H8A121.4C6—N2—Ag1131.88 (15)
C7—C8—H8A121.4C7—N2—Ag1119.44 (14)
C8—C9—C10121.7 (2)C6—N3—C12108.07 (18)
C8—C9—H9A119.2C6—N3—O3iii129.98 (14)
C10—C9—H9A119.2C12—N3—O3iii119.74 (14)
C11—C10—C9121.9 (2)C6—N3—H3A126.0
C11—C10—H10A119.1C12—N3—H3A126.0
C9—C10—H10A119.1C13—O1—Ag1125.98 (17)
C10—C11—C12116.3 (2)C13—O2—O4110.37 (15)
C10—C11—H11A121.9C13—O2—H2B111 (3)
N1—C1—C2—C30.3 (4)C14—C15—C17—C14ii0.3 (4)
C1—C2—C3—C40.0 (4)C16—C15—C17—C14ii−178.4 (2)
C2—C3—C4—C50.4 (3)C4—C5—N1—C11.3 (4)
C2—C3—C4—C6−179.0 (2)C4—C5—N1—Ag1i−174.85 (17)
C3—C4—C5—N1−1.1 (4)C2—C1—N1—C5−0.9 (4)
C6—C4—C5—N1178.3 (2)C2—C1—N1—Ag1i175.50 (19)
C5—C4—C6—N3169.4 (2)N3—C6—N2—C70.7 (2)
C3—C4—C6—N3−11.2 (3)C4—C6—N2—C7−179.8 (2)
C5—C4—C6—N2−10.2 (3)N3—C6—N2—Ag1158.67 (15)
C3—C4—C6—N2169.2 (2)C4—C6—N2—Ag1−21.7 (3)
N2—C7—C8—C9−179.8 (2)C8—C7—N2—C6179.0 (2)
C12—C7—C8—C9−0.6 (3)C12—C7—N2—C6−0.3 (2)
C7—C8—C9—C10−0.3 (4)C8—C7—N2—Ag117.7 (3)
C8—C9—C10—C110.9 (4)C12—C7—N2—Ag1−161.64 (14)
C9—C10—C11—C12−0.5 (4)N1i—Ag1—N2—C657.2 (3)
C10—C11—C12—N3−179.8 (2)O1—Ag1—N2—C6−135.92 (19)
C10—C11—C12—C7−0.4 (4)N1i—Ag1—N2—C7−147.28 (17)
C8—C7—C12—N3−179.5 (2)O1—Ag1—N2—C719.57 (18)
N2—C7—C12—N3−0.1 (2)N2—C6—N3—C12−0.8 (2)
C8—C7—C12—C110.9 (4)C4—C6—N3—C12179.6 (2)
N2—C7—C12—C11−179.7 (2)N2—C6—N3—O3iii−163.40 (15)
O1—C13—C14—C17ii−8.4 (3)C4—C6—N3—O3iii17.0 (3)
O2—C13—C14—C17ii170.6 (2)C11—C12—N3—C6−180.0 (2)
O1—C13—C14—C15172.0 (2)C7—C12—N3—C60.5 (2)
O2—C13—C14—C15−9.0 (4)C11—C12—N3—O3iii−15.2 (3)
C17ii—C14—C15—C17−0.3 (4)C7—C12—N3—O3iii165.26 (14)
C13—C14—C15—C17179.3 (2)O2—C13—O1—Ag1−15.7 (4)
C17ii—C14—C15—C16178.2 (2)C14—C13—O1—Ag1163.34 (15)
C13—C14—C15—C16−2.1 (4)N2—Ag1—O1—C13−85.5 (2)
C17—C15—C16—O315.1 (3)N1i—Ag1—O1—C1388.1 (2)
C14—C15—C16—O3−163.5 (2)O1—C13—O2—O4−175.0 (2)
C17—C15—C16—O4−164.8 (2)C14—C13—O2—O46.0 (3)
C14—C15—C16—O416.6 (4)O3—C16—O4—O40.0 (4)
C17—C15—C16—O4−164.8 (2)C15—C16—O4—O40.0 (3)
C14—C15—C16—O416.6 (4)
D—H···AD—HH···AD···AD—H···A
O2—H2B···O40.846 (19)1.56 (2)2.399 (3)171 (4)
N3—H3A···O3iii0.861.922.742 (3)159
Ag1—N22.1663 (18)
Ag1—N1i2.207 (2)
Ag1—O12.3889 (18)
N2—Ag1—N1i150.61 (7)
N2—Ag1—O1115.06 (7)
N1i—Ag1—O193.66 (7)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2B⋯O40.846 (19)1.56 (2)2.399 (3)171 (4)
N3—H3A⋯O3ii0.861.922.742 (3)159

Symmetry code: (ii) .

  4 in total

1.  Syntheses and characterizations of three-dimensional channel-like polymeric lanthanide complexes constructed by 1,2,4,5-benzenetetracarboxylic acid.

Authors:  Rong Cao; Daofeng Sun; Yucang Liang; Maochun Hong; Kazuyuki Tatsumi; Qian Shi
Journal:  Inorg Chem       Date:  2002-04-22       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  New two-dimensional metal-organic networks constructed from 1,2,4,5-benzenetetracarboxylate and chelate ligands.

Authors:  Yangguang Li; Na Hao; Ying Lu; Enbo Wang; Zhenhui Kang; Changwen Hu
Journal:  Inorg Chem       Date:  2003-05-05       Impact factor: 5.165

4.  Polymeric aqua(mu4-dihydrogen benzene-1,2,4,5-tetracarboxylato)(1,10-phenanthroline)cobalt(II).

Authors:  Mao Lin Hu; Hong Ping Xiao; Ji Xin Yuan
Journal:  Acta Crystallogr C       Date:  2004-02-10       Impact factor: 1.172

  4 in total
  1 in total

1.  Poly[4-(dimethyl-amino)pyridinium [(μ(6)-5-carboxy-benzene-1,2,4-tricarboxy-ato-κO:O:O:O:O:O)diargentate(I)]].

Authors:  Xiao-Fei Zhu; Yan-Hong Zhou; Li Guan; Hong Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-25
  1 in total

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