| Literature DB >> 21201875 |
Abstract
The title complex, (NH(4))(2)[Co(C(3)H(3)O(4))(2)(H(2)O)(2)]·2H(2)O, features a six-coordinate Co atom located on a center of symmetry. The octa-hedral O(6) coordination geometry is defined by two bidentate malonate ligands and two water mol-ecules, with the latter in a trans configuration. The mol-ecules are linked through O-H⋯O and N-H⋯O hydrogen-bonding inter-actions, forming a three-dimensional supra-molecular network.Entities:
Year: 2008 PMID: 21201875 PMCID: PMC2960805 DOI: 10.1107/S1600536808004625
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (NH4)2[Co(C3H3O4)2(H2O)2]·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1285 reflections | |
| θ = 2.9–25.5º | |
| µ = 1.29 mm−1 | |
| α = 89.032 (5)º | |
| β = 73.076 (5)º | Block, purple |
| γ = 88.062 (5)º | 0.24 × 0.21 × 0.18 mm |
| Bruker SMART APEX CCD diffractometer | 1285 independent reflections |
| Radiation source: fine-focus sealed tube | 1246 reflections with |
| Monochromator: graphite | |
| θmax = 25.5º | |
| φ and ω scans | θmin = 2.9º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 1996) | |
| 1817 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 1285 reflections | Δρmax = 0.39 e Å−3 |
| 97 parameters | Δρmin = −0.76 e Å−3 |
| 4 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.0000 | 1.0000 | 0.5000 | 0.0246 (2) | |
| C1 | 0.2349 (4) | 0.7294 (4) | 0.2083 (4) | 0.0302 (6) | |
| C2 | 0.3182 (4) | 0.6385 (4) | 0.3572 (4) | 0.0371 (7) | |
| H2A | 0.3696 | 0.5128 | 0.3143 | 0.045* | |
| H2B | 0.4320 | 0.7108 | 0.3638 | 0.045* | |
| C3 | 0.1802 (4) | 0.6198 (3) | 0.5553 (3) | 0.0265 (5) | |
| N1 | 0.1772 (4) | 0.2806 (4) | 0.0011 (3) | 0.0438 (6) | |
| H1B | 0.0825 | 0.2715 | 0.1031 | 0.053* | |
| H1A | 0.2558 | 0.1845 | −0.0309 | 0.053* | |
| H1C | 0.1082 | 0.3123 | −0.0726 | 0.053* | |
| H1D | 0.2470 | 0.3754 | 0.0071 | 0.053* | |
| O1 | 0.1213 (3) | 0.8738 (3) | 0.2439 (2) | 0.0322 (4) | |
| O2 | 0.2920 (4) | 0.6563 (3) | 0.0484 (3) | 0.0501 (6) | |
| O3 | 0.0789 (3) | 0.7649 (2) | 0.6328 (2) | 0.0315 (4) | |
| O4 | 0.1752 (3) | 0.4670 (2) | 0.6380 (3) | 0.0371 (5) | |
| O5 | 0.2733 (3) | 1.1242 (3) | 0.4906 (3) | 0.0347 (5) | |
| H5A | 0.3694 | 1.1179 | 0.3893 | 0.042* | |
| H5B | 0.2513 | 1.2374 | 0.5296 | 0.042* | |
| O6 | 0.6141 (3) | 0.0563 (3) | 0.2034 (3) | 0.0391 (5) | |
| H6B | 0.7011 | 0.0079 | 0.2521 | 0.047* | |
| H6A | 0.6729 | 0.1133 | 0.1038 | 0.047* |
| Co1 | 0.0283 (3) | 0.0183 (3) | 0.0245 (3) | 0.00435 (19) | −0.0037 (2) | −0.00096 (19) |
| C1 | 0.0355 (14) | 0.0214 (13) | 0.0272 (13) | −0.0012 (11) | 0.0012 (11) | −0.0005 (10) |
| C2 | 0.0345 (15) | 0.0327 (15) | 0.0364 (15) | 0.0115 (12) | 0.0003 (12) | 0.0024 (12) |
| C3 | 0.0301 (13) | 0.0227 (13) | 0.0276 (13) | 0.0007 (10) | −0.0103 (11) | −0.0007 (10) |
| N1 | 0.0573 (17) | 0.0370 (14) | 0.0322 (13) | 0.0090 (12) | −0.0063 (12) | −0.0035 (10) |
| O1 | 0.0394 (11) | 0.0270 (10) | 0.0266 (9) | 0.0088 (8) | −0.0047 (8) | −0.0021 (7) |
| O2 | 0.0817 (18) | 0.0295 (11) | 0.0280 (11) | 0.0148 (11) | −0.0001 (11) | −0.0061 (8) |
| O3 | 0.0435 (11) | 0.0218 (9) | 0.0250 (9) | 0.0067 (8) | −0.0040 (8) | 0.0008 (7) |
| O4 | 0.0534 (13) | 0.0203 (10) | 0.0353 (11) | 0.0045 (9) | −0.0099 (9) | 0.0013 (8) |
| O5 | 0.0310 (10) | 0.0241 (10) | 0.0430 (11) | 0.0009 (8) | −0.0012 (8) | −0.0054 (8) |
| O6 | 0.0400 (11) | 0.0414 (12) | 0.0322 (11) | −0.0001 (9) | −0.0054 (9) | 0.0059 (9) |
| Co1—O1 | 2.0502 (18) | C2—H2B | 0.9699 |
| Co1—O1i | 2.0502 (18) | C3—O4 | 1.231 (3) |
| Co1—O3i | 2.0592 (17) | C3—O3 | 1.272 (3) |
| Co1—O3 | 2.0592 (17) | N1—H1B | 0.8500 |
| Co1—O5i | 2.1020 (19) | N1—H1A | 0.8500 |
| Co1—O5 | 2.1020 (19) | N1—H1C | 0.8500 |
| C1—O2 | 1.252 (3) | N1—H1D | 0.8500 |
| C1—O1 | 1.253 (3) | O5—H5A | 0.8498 |
| C1—C2 | 1.516 (4) | O5—H5B | 0.8498 |
| C2—C3 | 1.512 (4) | O6—H6B | 0.8500 |
| C2—H2A | 0.9699 | O6—H6A | 0.8378 |
| O1—Co1—O1i | 180 | C1—C2—H2A | 107.8 |
| O1—Co1—O3i | 89.76 (7) | C3—C2—H2B | 107.3 |
| O1i—Co1—O3i | 90.24 (7) | C1—C2—H2B | 107.8 |
| O1—Co1—O3 | 90.24 (7) | H2A—C2—H2B | 107.1 |
| O1i—Co1—O3 | 89.76 (7) | O4—C3—O3 | 122.4 (2) |
| O3i—Co1—O3 | 180 | O4—C3—C2 | 119.0 (2) |
| O1—Co1—O5i | 87.61 (8) | O3—C3—C2 | 118.6 (2) |
| O1i—Co1—O5i | 92.39 (8) | H1B—N1—H1A | 116.6 |
| O3i—Co1—O5i | 90.37 (8) | H1B—N1—H1C | 99.2 |
| O3—Co1—O5i | 89.63 (8) | H1A—N1—H1C | 116.0 |
| O1—Co1—O5 | 92.39 (8) | H1B—N1—H1D | 109.3 |
| O1i—Co1—O5 | 87.61 (8) | H1A—N1—H1D | 108.6 |
| O3i—Co1—O5 | 89.63 (8) | H1C—N1—H1D | 106.4 |
| O3—Co1—O5 | 90.37 (8) | C1—O1—Co1 | 127.52 (17) |
| O5i—Co1—O5 | 180 | C3—O3—Co1 | 127.00 (16) |
| O2—C1—O1 | 122.7 (3) | Co1—O5—H5A | 118.7 |
| O2—C1—C2 | 116.3 (2) | Co1—O5—H5B | 109.9 |
| O1—C1—C2 | 121.0 (2) | H5A—O5—H5B | 111.0 |
| C3—C2—C1 | 118.6 (2) | H6B—O6—H6A | 109.3 |
| C3—C2—H2A | 107.7 |
| H··· | ||||
| O5—H5A···O6ii | 0.85 | 1.90 | 2.723 (3) | 164 |
| O5—H5B···O4ii | 0.85 | 1.82 | 2.663 (3) | 172 |
| O6—H6A···O1iii | 0.84 | 2.57 | 3.336 (3) | 153 |
| O6—H6A···O2iii | 0.84 | 1.95 | 2.704 (3) | 149 |
| O6—H6B···O3iv | 0.85 | 2.57 | 3.063 (3) | 118 |
| O6—H6B···O5iv | 0.85 | 2.17 | 2.879 (3) | 141 |
| N1—H1A···O6v | 0.85 | 2.16 | 2.950 (3) | 155 |
| N1—H1B···O3vi | 0.85 | 1.97 | 2.805 (3) | 165 |
| N1—H1C···O4vii | 0.85 | 2.33 | 2.988 (3) | 135 |
| N1—H1D···O2 | 0.85 | 2.06 | 2.857 (4) | 155 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H5 | 0.85 | 1.90 | 2.723 (3) | 164 |
| O5—H5 | 0.85 | 1.82 | 2.663 (3) | 172 |
| O6—H6 | 0.84 | 2.57 | 3.336 (3) | 153 |
| O6—H6 | 0.84 | 1.95 | 2.704 (3) | 149 |
| O6—H6 | 0.85 | 2.57 | 3.063 (3) | 118 |
| O6—H6 | 0.85 | 2.17 | 2.879 (3) | 141 |
| N1—H1 | 0.85 | 2.16 | 2.950 (3) | 155 |
| N1—H1 | 0.85 | 1.97 | 2.805 (3) | 165 |
| N1—H1 | 0.85 | 2.33 | 2.988 (3) | 135 |
| N1—H1 | 0.85 | 2.06 | 2.857 (4) | 155 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .