Literature DB >> 21201785

(E,E)-1,5-Di-2-thienylpenta-1,4-dien-3-one.

S Murugavel, G Ganesh, A Subbiahpandi, Ramalingam Murugan, S Srimannarayanan.   

Abstract

In the title compound, C(13)H(10)OS(2), the dihedral angle between the thio-phene rings is 14.3 (1)°. The mol-ecular structure is stabilized by C-H⋯π inter-actions between a thio-phene H atom and an adjacent thio-phene ring, and by inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2008        PMID: 21201785      PMCID: PMC2960723          DOI: 10.1107/S1600536808026603

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the bioactivity of chalcones, see: Go et al. (2005 ▶). For uses in organic solid-state photochemistry, see: Gould et al. (1995 ▶); For a related structure, see: Arshad et al. (2008 ▶). For the non-linear optical properties of bis-chalcones, see: Uchida et al. (1998 ▶).

Experimental

Crystal data

C13H10OS2 M = 246.35 Orthorhombic, a = 12.1141 (4) Å b = 7.4449 (3) Å c = 27.246 (1) Å V = 2457.27 (16) Å3 Z = 8 Mo Kα radiation μ = 0.41 mm−1 T = 293 (2) K 0.26 × 0.15 × 0.15 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.984, T max = 0.987 13976 measured reflections 2373 independent reflections 1719 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.210 S = 1.01 2373 reflections 145 parameters H-atom parameters constrained Δρmax = 0.49 e Å−3 Δρmin = −0.36 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia (1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808026603/lx2066sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808026603/lx2066Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H10OS2F000 = 1024
Mr = 246.35Dx = 1.332 Mg m3
Orthorhombic, PbcaMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 10259 reflections
a = 12.1141 (4) Åθ = 2.3–30.3º
b = 7.4449 (3) ŵ = 0.41 mm1
c = 27.246 (1) ÅT = 293 (2) K
V = 2457.27 (16) Å3Block, colourless
Z = 80.26 × 0.15 × 0.15 mm
Bruker APEXII CCD area-detector diffractometer2373 independent reflections
Radiation source: fine-focus sealed tube1719 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.023
Detector resolution: 10 pixels mm-1θmax = 26.0º
T = 293(2) Kθmin = 1.5º
ω scansh = −11→14
Absorption correction: Multi-scan(SADABS; Sheldrick, 1996)k = −7→9
Tmin = 0.984, Tmax = 0.987l = −32→31
13976 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.057H-atom parameters constrained
wR(F2) = 0.211  w = 1/[σ2(Fo2) + (0.1295P)2 + 1.4091P] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max < 0.001
2373 reflectionsΔρmax = 0.49 e Å3
145 parametersΔρmin = −0.36 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.52710 (7)0.54328 (13)0.23889 (4)0.0733 (4)
S20.53529 (8)0.23805 (14)0.51370 (4)0.0801 (4)
O10.82061 (18)0.5548 (4)0.38920 (9)0.0734 (7)
C10.5312 (3)0.2113 (6)0.57495 (18)0.0876 (13)
H10.47680.14550.59100.105*
C20.6135 (4)0.2934 (6)0.59817 (16)0.0907 (12)
H20.62090.29040.63210.109*
C30.6903 (3)0.3874 (5)0.56716 (12)0.0667 (9)
H30.75250.45070.57730.080*
C40.6519 (3)0.3642 (4)0.51665 (13)0.0612 (8)
C50.7055 (3)0.4350 (4)0.47339 (13)0.0610 (8)
H50.77550.48430.47740.073*
C60.6638 (3)0.4359 (4)0.42854 (13)0.0612 (8)
H60.59380.38810.42360.073*
C70.7236 (2)0.5093 (4)0.38617 (12)0.0573 (8)
C80.6611 (2)0.5283 (4)0.34019 (12)0.0594 (8)
H80.59010.48100.33840.071*
C90.7027 (2)0.6109 (4)0.30106 (12)0.0565 (7)
H90.77330.65830.30450.068*
C100.6513 (2)0.6354 (4)0.25413 (12)0.0536 (7)
C110.6974 (2)0.7299 (4)0.21337 (11)0.0541 (7)
H110.76530.78820.21320.065*
C120.6228 (3)0.7207 (6)0.17301 (14)0.0794 (10)
H120.63640.77640.14310.095*
C130.5322 (3)0.6260 (6)0.18183 (15)0.0774 (11)
H130.47710.60740.15860.093*
U11U22U33U12U13U23
S10.0542 (6)0.0750 (6)0.0909 (8)−0.0090 (4)−0.0089 (4)−0.0068 (5)
S20.0619 (6)0.0821 (7)0.0962 (9)−0.0065 (4)0.0047 (4)0.0076 (5)
O10.0483 (13)0.1008 (18)0.0710 (16)−0.0067 (11)0.0009 (10)−0.0029 (12)
C10.069 (2)0.090 (3)0.103 (3)0.0109 (19)0.018 (2)0.033 (2)
C20.091 (3)0.113 (3)0.068 (2)0.012 (3)0.000 (2)0.013 (2)
C30.071 (2)0.073 (2)0.056 (2)−0.0057 (16)−0.0001 (15)0.0110 (15)
C40.0558 (17)0.0542 (15)0.074 (2)0.0020 (13)0.0024 (14)0.0003 (14)
C50.0527 (16)0.0593 (17)0.071 (2)−0.0027 (13)−0.0005 (15)−0.0028 (14)
C60.0510 (16)0.0621 (17)0.071 (2)−0.0018 (13)0.0012 (14)−0.0036 (15)
C70.0497 (17)0.0576 (16)0.065 (2)0.0021 (13)0.0033 (13)−0.0081 (14)
C80.0467 (15)0.0646 (17)0.067 (2)−0.0029 (13)0.0012 (14)−0.0081 (15)
C90.0435 (14)0.0592 (16)0.067 (2)−0.0007 (12)−0.0031 (13)−0.0097 (14)
C100.0457 (15)0.0511 (14)0.0641 (19)0.0013 (12)−0.0020 (13)−0.0103 (13)
C110.0442 (14)0.0624 (17)0.0558 (18)−0.0046 (12)−0.0030 (12)−0.0082 (13)
C120.081 (2)0.096 (3)0.062 (2)0.013 (2)0.0044 (18)−0.0026 (18)
C130.063 (2)0.091 (3)0.078 (3)0.0085 (18)−0.0146 (17)−0.022 (2)
S1—C131.673 (5)C6—C71.468 (5)
S1—C101.704 (3)C6—H60.9300
S2—C11.682 (5)C7—C81.471 (5)
S2—C41.699 (3)C8—C91.330 (5)
O1—C71.225 (4)C8—H80.9300
C1—C21.330 (6)C9—C101.434 (4)
C1—H10.9300C9—H90.9300
C2—C31.438 (5)C10—C111.429 (4)
C2—H20.9300C11—C121.425 (5)
C3—C41.463 (5)C11—H110.9300
C3—H30.9300C12—C131.326 (5)
C4—C51.445 (5)C12—H120.9300
C5—C61.322 (5)C13—H130.9300
C5—H50.9300
C13—S1—C1092.62 (17)O1—C7—C8121.6 (3)
C1—S2—C492.5 (2)C6—C7—C8116.8 (3)
C2—C1—S2113.3 (3)C9—C8—C7122.1 (3)
C2—C1—H1123.3C9—C8—H8118.9
S2—C1—H1123.3C7—C8—H8118.9
C1—C2—C3115.4 (4)C8—C9—C10127.5 (3)
C1—C2—H2122.3C8—C9—H9116.3
C3—C2—H2122.3C10—C9—H9116.3
C2—C3—C4106.8 (3)C9—C10—C11125.9 (3)
C2—C3—H3126.6C9—C10—S1123.3 (2)
C4—C3—H3126.6C11—C10—S1110.7 (2)
C5—C4—C3125.6 (3)C12—C11—C10109.1 (3)
C5—C4—S2122.5 (3)C12—C11—H11125.4
C3—C4—S2112.0 (2)C10—C11—H11125.4
C6—C5—C4125.7 (3)C13—C12—C11114.2 (4)
C6—C5—H5117.1C13—C12—H12122.9
C4—C5—H5117.1C11—C12—H12122.9
C5—C6—C7122.7 (3)C12—C13—S1113.3 (3)
C5—C6—H6118.7C12—C13—H13123.4
C7—C6—H6118.7S1—C13—H13123.4
O1—C7—C6121.5 (3)
C4—S2—C1—C20.3 (4)O1—C7—C8—C9−6.5 (5)
S2—C1—C2—C3−0.5 (5)C6—C7—C8—C9172.5 (3)
C1—C2—C3—C40.5 (5)C7—C8—C9—C10178.8 (3)
C2—C3—C4—C5−179.2 (3)C8—C9—C10—C11177.9 (3)
C2—C3—C4—S2−0.3 (4)C8—C9—C10—S1−5.4 (4)
C1—S2—C4—C5179.0 (3)C13—S1—C10—C9−177.9 (3)
C1—S2—C4—C30.1 (3)C13—S1—C10—C11−0.8 (2)
C3—C4—C5—C6−170.2 (3)C9—C10—C11—C12178.5 (3)
S2—C4—C5—C611.1 (5)S1—C10—C11—C121.5 (3)
C4—C5—C6—C7−179.5 (3)C10—C11—C12—C13−1.6 (4)
C5—C6—C7—O18.6 (5)C11—C12—C13—S11.0 (4)
C5—C6—C7—C8−170.4 (3)C10—S1—C13—C12−0.1 (3)
D—H···AD—HH···AD···AD—H···A
C1—H1···O1i0.932.473.374 (5)165
C13—H13···O1ii0.932.333.255 (4)171
C11—H11···Cgiii0.933.123.936 (5)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1⋯O1i0.932.473.374 (5)165
C13—H13⋯O1ii0.932.333.255 (4)171
C11—H11⋯Cgiii0.933.123.936 (5)148

Symmetry codes: (i) ; (ii) ; (iii) . Cg is the centroid of the C10/C11/C12/C13/S1 thio­phene ring.

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Chalcones: an update on cytotoxic and chemoprotective properties.

Authors:  M L Go; X Wu; X L Liu
Journal:  Curr Med Chem       Date:  2005       Impact factor: 4.530

3.  (1E,4E)-1,5-Bis(4-methyl-phen-yl)penta-1,4-dien-3-one.

Authors:  Muhammad Nadeem Arshad; Muhammad Nawaz Tahir; Muhammad Nadeem Asghar; Islam Ullah Khan; Muhammad Ashfaq
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-05
  3 in total

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