Literature DB >> 21201725

N-Phenyl-piperidine-1-carbothio-amide.

Yu-Feng Li1, Fang-Fang Jian.   

Abstract

The title compound, C(12)H(16)N(2)S, was prepared by the reaction of with phenyl isothio-cyanate and piperidine. In the crystal structure, the mol-ecule exhibits inter-molecular N-H⋯S hydrogen bonds and weak intra-molecular C-H⋯S and C-H⋯N hydrogen-bonding inter-actions.

Entities:  

Year:  2008        PMID: 21201725      PMCID: PMC2960655          DOI: 10.1107/S1600536808025142

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Casas et al. (2002 ▶); Cowley et al. (2002 ▶); Toshiaki et al. (2003 ▶).

Experimental

Crystal data

C12H16N2S M = 220.33 Monoclinic, a = 11.661 (2) Å b = 9.5220 (19) Å c = 10.989 (2) Å β = 102.15 (3)° V = 1192.8 (4) Å3 Z = 4 Mo Kα radiation μ = 0.24 mm−1 T = 293 (2) K 0.25 × 0.20 × 0.18 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: none 2681 measured reflections 2547 independent reflections 1972 reflections with I > 2σ(I) R int = 0.009 3 standard reflections every 100 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.123 S = 1.02 2547 reflections 149 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.26 e Å−3 Δρmin = −0.38 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: NRCVAX (Gabe et al., 1989 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808025142/at2604sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808025142/at2604Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H16N2SF000 = 472
Mr = 220.33Dx = 1.227 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 11.661 (2) Åθ = 1.8–27.0º
b = 9.5220 (19) ŵ = 0.24 mm1
c = 10.989 (2) ÅT = 293 (2) K
β = 102.15 (3)ºBlock, colourless
V = 1192.8 (4) Å30.25 × 0.20 × 0.18 mm
Z = 4
Enraf–Nonius CAD-4 diffractometerRint = 0.009
Radiation source: fine-focus sealed tubeθmax = 27.0º
Monochromator: graphiteθmin = 1.8º
T = 293(2) Kh = −13→13
ω scansk = −11→0
Absorption correction: nonel = 0→13
2681 measured reflections3 standard reflections
2547 independent reflections every 100 reflections
1972 reflections with I > 2σ(I) intensity decay: none
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.040  w = 1/[σ2(Fo2) + (0.0738P)2 + 0.2418P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.123(Δ/σ)max < 0.001
S = 1.03Δρmax = 0.26 e Å3
2547 reflectionsΔρmin = −0.38 e Å3
149 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.129 (8)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.48254 (4)0.19137 (5)0.42566 (4)0.04595 (19)
N10.33547 (12)0.37786 (15)0.29140 (15)0.0441 (4)
N20.53031 (12)0.41101 (18)0.29001 (15)0.0465 (4)
C10.23443 (15)0.2923 (2)0.3048 (2)0.0507 (5)
H1A0.18780.34310.35370.061*
H1B0.26150.20600.34840.061*
C20.15982 (19)0.2580 (2)0.1783 (2)0.0655 (6)
H2B0.09000.20830.18900.079*
H2C0.20340.19660.13410.079*
C30.1237 (2)0.3906 (2)0.1007 (3)0.0701 (7)
H3A0.08370.36420.01730.084*
H3B0.06960.44500.13770.084*
C40.23033 (19)0.4800 (2)0.09364 (19)0.0558 (5)
H4A0.27940.43080.04650.067*
H4B0.20510.56760.05120.067*
C50.29967 (16)0.51043 (19)0.22297 (19)0.0449 (4)
C60.44703 (14)0.33344 (17)0.33069 (15)0.0362 (4)
C70.65404 (14)0.39270 (17)0.32415 (16)0.0388 (4)
C80.71647 (15)0.38347 (18)0.23028 (18)0.0439 (4)
H8A0.67720.38410.14730.053*
C90.83783 (16)0.3733 (2)0.2604 (2)0.0522 (5)
H9A0.87970.36730.19730.063*
C100.89689 (16)0.3721 (2)0.3832 (2)0.0538 (5)
H10A0.97820.36460.40300.065*
C110.83420 (16)0.3822 (2)0.4765 (2)0.0533 (5)
H11A0.87370.38140.55940.064*
C120.71314 (16)0.3935 (2)0.44777 (18)0.0481 (4)
H12A0.67160.40150.51100.058*
H5A0.3633 (19)0.566 (2)0.220 (2)0.055 (6)*
H5B0.2457 (19)0.561 (2)0.267 (2)0.056 (6)*
H20.5075 (17)0.463 (2)0.230 (2)0.051 (6)*
U11U22U33U12U13U23
S10.0424 (3)0.0424 (3)0.0520 (3)0.00420 (18)0.00770 (19)0.01026 (19)
N10.0343 (7)0.0404 (8)0.0576 (9)−0.0006 (6)0.0095 (6)0.0122 (7)
N20.0336 (7)0.0551 (9)0.0494 (9)−0.0004 (7)0.0058 (6)0.0162 (7)
C10.0344 (9)0.0481 (10)0.0717 (13)0.0002 (7)0.0158 (8)0.0176 (9)
C20.0502 (11)0.0419 (11)0.0962 (17)−0.0057 (9)−0.0033 (11)0.0036 (11)
C30.0613 (13)0.0556 (13)0.0792 (16)−0.0016 (10)−0.0179 (11)0.0042 (11)
C40.0655 (12)0.0503 (11)0.0525 (11)0.0128 (9)0.0142 (9)0.0097 (9)
C50.0370 (8)0.0355 (9)0.0631 (12)0.0021 (7)0.0124 (8)0.0092 (8)
C60.0351 (8)0.0369 (8)0.0367 (8)−0.0014 (6)0.0078 (6)−0.0016 (6)
C70.0335 (8)0.0343 (8)0.0475 (9)−0.0029 (6)0.0059 (7)0.0017 (7)
C80.0418 (9)0.0420 (10)0.0474 (10)−0.0041 (7)0.0081 (7)0.0007 (7)
C90.0434 (10)0.0475 (11)0.0706 (13)−0.0022 (8)0.0233 (9)−0.0035 (9)
C100.0320 (9)0.0451 (10)0.0814 (14)−0.0008 (7)0.0052 (9)0.0032 (9)
C110.0435 (10)0.0539 (12)0.0556 (11)−0.0051 (8)−0.0054 (8)0.0008 (9)
C120.0428 (9)0.0536 (11)0.0466 (10)−0.0036 (8)0.0066 (8)−0.0027 (8)
S1—C61.7056 (17)C4—C51.508 (3)
N1—C61.349 (2)C4—H4A0.9700
N1—C11.465 (2)C4—H4B0.9700
N1—C51.484 (2)C5—H5A0.92 (2)
N2—C61.368 (2)C5—H5B0.99 (2)
N2—C71.423 (2)C7—C81.385 (3)
N2—H20.82 (2)C7—C121.388 (2)
C1—C21.512 (3)C8—C91.387 (3)
C1—H1A0.9700C8—H8A0.9300
C1—H1B0.9700C9—C101.380 (3)
C2—C31.533 (3)C9—H9A0.9300
C2—H2B0.9700C10—C111.383 (3)
C2—H2C0.9700C10—H10A0.9300
C3—C41.522 (3)C11—C121.384 (3)
C3—H3A0.9700C11—H11A0.9300
C3—H3B0.9700C12—H12A0.9300
C6—N1—C1122.35 (14)H4A—C4—H4B108.2
C6—N1—C5125.33 (14)N1—C5—C4110.63 (16)
C1—N1—C5112.18 (14)N1—C5—H5A111.5 (13)
C6—N2—C7126.72 (15)C4—C5—H5A110.9 (13)
C6—N2—H2117.1 (14)N1—C5—H5B107.9 (13)
C7—N2—H2115.0 (14)C4—C5—H5B106.3 (12)
N1—C1—C2110.30 (17)H5A—C5—H5B109.3 (18)
N1—C1—H1A109.6N1—C6—N2115.41 (15)
C2—C1—H1A109.6N1—C6—S1122.54 (12)
N1—C1—H1B109.6N2—C6—S1122.05 (12)
C2—C1—H1B109.6C8—C7—C12119.93 (16)
H1A—C1—H1B108.1C8—C7—N2118.31 (16)
C1—C2—C3111.80 (18)C12—C7—N2121.62 (16)
C1—C2—H2B109.3C7—C8—C9119.78 (18)
C3—C2—H2B109.3C7—C8—H8A120.1
C1—C2—H2C109.3C9—C8—H8A120.1
C3—C2—H2C109.3C10—C9—C8120.50 (19)
H2B—C2—H2C107.9C10—C9—H9A119.7
C4—C3—C2110.95 (18)C8—C9—H9A119.7
C4—C3—H3A109.4C9—C10—C11119.48 (17)
C2—C3—H3A109.4C9—C10—H10A120.3
C4—C3—H3B109.4C11—C10—H10A120.3
C2—C3—H3B109.4C10—C11—C12120.59 (18)
H3A—C3—H3B108.0C10—C11—H11A119.7
C5—C4—C3109.95 (18)C12—C11—H11A119.7
C5—C4—H4A109.7C11—C12—C7119.70 (18)
C3—C4—H4A109.7C11—C12—H12A120.1
C5—C4—H4B109.7C7—C12—H12A120.1
C3—C4—H4B109.7
C6—N1—C1—C2−117.8 (2)C7—N2—C6—N1175.49 (17)
C5—N1—C1—C258.1 (2)C7—N2—C6—S1−3.9 (3)
N1—C1—C2—C3−54.1 (2)C6—N2—C7—C8129.22 (19)
C1—C2—C3—C452.7 (3)C6—N2—C7—C12−55.1 (3)
C2—C3—C4—C5−53.8 (3)C12—C7—C8—C90.8 (3)
C6—N1—C5—C4115.4 (2)N2—C7—C8—C9176.49 (16)
C1—N1—C5—C4−60.4 (2)C7—C8—C9—C100.1 (3)
C3—C4—C5—N157.2 (2)C8—C9—C10—C11−0.5 (3)
C1—N1—C6—N2167.41 (17)C9—C10—C11—C120.0 (3)
C5—N1—C6—N2−8.0 (3)C10—C11—C12—C70.9 (3)
C1—N1—C6—S1−13.2 (2)C8—C7—C12—C11−1.3 (3)
C5—N1—C6—S1171.48 (14)N2—C7—C12—C11−176.82 (17)
D—H···AD—HH···AD···AD—H···A
N2—H2···S1i0.82 (2)2.78 (2)3.5520 (19)156.1 (18)
C1—H1B···S10.972.543.073 (2)114
C5—H5A···N20.92 (2)2.44 (2)2.800 (2)103.8 (14)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯S1i0.82 (2)2.78 (2)3.5520 (19)156.1 (18)
C1—H1B⋯S10.972.543.073 (2)114
C5—H5A⋯N20.92 (2)2.44 (2)2.800 (2)103.8 (14)

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An unusual dimeric structure of a Cu(I) bis(thiosemicarbazone) complex: implications for the mechanism of hypoxic selectivity of the Cu(II) derivatives.

Authors:  Andrew R Cowley; Jonathan R Dilworth; Paul S Donnelly; Elena Labisbal; Antonio Sousa
Journal:  J Am Chem Soc       Date:  2002-05-15       Impact factor: 15.419

3.  Metal-induced cyclization of thiosemicarbazones derived from beta-keto amides and beta-keto esters: open-chain and cyclized ligands in zinc(II) complexes.

Authors:  José S Casas; María V Castaño; Eduardo E Castellano; Javier Ellena; María S García-Tasende; Angeles Gato; Agustín Sánchez; Luisa M Sanjuán; José Sordo
Journal:  Inorg Chem       Date:  2002-03-25       Impact factor: 5.165

4.  Reaction and characterization of thioamide dianions derived from N-benzyl thioamides.

Authors:  Toshiaki Murai; Hideo Aso; Yoshiharu Tatematsu; Yoshiaki Itoh; Hisayuki Niwa; Shinzi Kato
Journal:  J Org Chem       Date:  2003-10-31       Impact factor: 4.354

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.