Literature DB >> 21201715

(2S,3S)-3-(4-Chloro-phen-yl)-8-methyl-tropane-2-carboxylic acid.

Zheng-Ping Chen1, Song-Pei Wang, Xiao-Min Li, Jie Tang, Jian-Guo Lin.   

Abstract

In the title compound, C(15)H(18)ClNO(2), the inter-nal torsion angles of the tropane ring are comparable to those of tropane rings in the crystal structures reported for cocaine and its derivatives. There is an intra-molecular hydrogen bond between the N atom in the tropane ring and the O atom of the carboxyl group. The crystal structure is further stabilized by many weak C-H⋯O inter-actions between the mol-ecules in the ab plane, forming a two-dimensional supra-molecular network.

Entities:  

Year:  2008        PMID: 21201715      PMCID: PMC2960499          DOI: 10.1107/S1600536808025002

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Clarke et al. (1973 ▶); Carroll et al. (1991 ▶, 2005 ▶). For related structures, see: Meltzer et al. (1997 ▶, 2001 ▶); Zhu et al. (1999 ▶). For related literature, see: Meegalla et al. (1997 ▶). For a description of the Cambridge Structural Database, see: Allen (2002 ▶).

Experimental

Crystal data

C15H18ClNO2 M = 279.75 Monoclinic, a = 8.219 (6) Å b = 6.501 (4) Å c = 12.731 (8) Å β = 100.692 (10)° V = 668.4 (8) Å3 Z = 2 Mo Kα radiation μ = 0.28 mm−1 T = 293 (2) K 0.20 × 0.10 × 0.10 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.956, T max = 0.976 3374 measured reflections 2760 independent reflections 2264 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.125 S = 0.99 2760 reflections 177 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.25 e Å−3 Δρmin = −0.21 e Å−3 Absolute structure: Flack (1983 ▶), 1135 Friedel pairs Flack parameter: −0.15 (9) Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808025002/fj2136sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808025002/fj2136Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H18ClNO2F000 = 296
Mr = 279.75Dx = 1.390 Mg m3
Monoclinic, P21Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 742 reflections
a = 8.219 (6) Åθ = 3.3–26.8º
b = 6.501 (4) ŵ = 0.28 mm1
c = 12.731 (8) ÅT = 293 (2) K
β = 100.692 (10)ºBlock, white
V = 668.4 (8) Å30.20 × 0.10 × 0.10 mm
Z = 2
Bruker SMART APEX CCD diffractometer2760 independent reflections
Radiation source: fine-focus sealed tube2264 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.042
T = 293(2) Kθmax = 27.2º
φ and ω scansθmin = 1.6º
Absorption correction: multi-scan(SADABS; Bruker, 2001)h = −8→10
Tmin = 0.956, Tmax = 0.976k = −8→8
3374 measured reflectionsl = −16→13
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.052  w = 1/[σ2(Fo2) + (0.0695P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.125(Δ/σ)max < 0.001
S = 0.99Δρmax = 0.25 e Å3
2760 reflectionsΔρmin = −0.21 e Å3
177 parametersExtinction correction: none
2 restraintsAbsolute structure: Flack (1983), 1135 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.15 (9)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.58072 (10)0.59422 (16)0.46455 (6)0.0650 (3)
O10.9356 (2)1.0348 (4)0.03436 (15)0.0508 (6)
O20.7924 (2)1.2275 (4)0.12844 (18)0.0614 (6)
C10.9057 (3)0.6847 (5)0.2742 (2)0.0414 (7)
H20.93760.61700.21690.050*
C20.7841 (3)0.6008 (5)0.3216 (2)0.0439 (7)
H30.73540.47630.29720.053*
C30.7350 (3)0.7004 (5)0.4043 (2)0.0433 (7)
C40.8053 (4)0.8847 (5)0.4423 (2)0.0464 (7)
H40.77030.95230.49850.056*
C50.9290 (3)0.9666 (5)0.3950 (2)0.0432 (7)
H50.97791.09020.42060.052*
C60.9824 (3)0.8694 (4)0.3104 (2)0.0335 (6)
C71.1233 (3)0.9616 (4)0.2641 (2)0.0350 (6)
H71.20840.99960.32560.042*
C81.0761 (3)1.1622 (4)0.2018 (2)0.0333 (6)
H81.05361.26650.25280.040*
C91.2231 (3)1.2388 (5)0.1525 (2)0.0361 (6)
H91.19761.37070.11590.043*
N101.2558 (3)1.0745 (4)0.07558 (17)0.0362 (5)
H10X1.157 (2)1.032 (5)0.045 (2)0.039 (8)*
C111.3402 (4)0.9115 (5)0.1503 (2)0.0463 (8)
H111.39690.81170.11210.056*
C121.2061 (4)0.8080 (4)0.1992 (2)0.0413 (7)
H12A1.25450.69670.24540.050*
H12B1.12330.74970.14280.050*
C131.3871 (3)1.2488 (5)0.2315 (3)0.0478 (8)
H13A1.36881.28140.30270.057*
H13B1.45921.35240.20990.057*
C141.4630 (3)1.0344 (6)0.2289 (2)0.0532 (8)
H14A1.56881.04200.20570.064*
H14B1.47970.97170.29920.064*
C150.9197 (3)1.1414 (4)0.1143 (2)0.0377 (6)
C161.3556 (4)1.1475 (5)−0.0028 (2)0.0484 (8)
H16A1.35831.0429−0.05570.073*
H16B1.46641.17660.03340.073*
H16C1.30681.2702−0.03690.073*
U11U22U33U12U13U23
Cl10.0584 (5)0.0864 (7)0.0526 (4)−0.0214 (5)0.0165 (4)0.0042 (5)
O10.0448 (12)0.0607 (15)0.0420 (11)−0.0054 (10)−0.0048 (9)−0.0107 (10)
O20.0358 (11)0.0697 (15)0.0758 (16)0.0112 (11)0.0029 (11)−0.0032 (13)
C10.0427 (15)0.0443 (18)0.0368 (14)−0.0029 (13)0.0060 (12)−0.0063 (12)
C20.0450 (15)0.0397 (16)0.0451 (15)−0.0061 (14)0.0033 (12)−0.0024 (14)
C30.0341 (14)0.059 (2)0.0348 (14)−0.0067 (13)0.0003 (12)0.0086 (14)
C40.0455 (17)0.060 (2)0.0342 (15)−0.0006 (15)0.0076 (12)−0.0077 (14)
C50.0429 (16)0.0426 (17)0.0424 (15)−0.0034 (13)0.0036 (12)−0.0102 (14)
C60.0327 (14)0.0343 (15)0.0311 (13)0.0039 (11)−0.0008 (11)0.0017 (11)
C70.0349 (14)0.0312 (14)0.0366 (13)0.0003 (11)0.0008 (11)−0.0014 (11)
C80.0336 (13)0.0300 (14)0.0352 (13)−0.0006 (10)0.0035 (11)−0.0050 (11)
C90.0365 (14)0.0340 (15)0.0352 (14)−0.0047 (12)0.0001 (11)−0.0025 (12)
N100.0327 (11)0.0390 (13)0.0359 (11)−0.0026 (10)0.0041 (9)−0.0007 (10)
C110.0444 (17)0.0428 (18)0.0535 (18)0.0140 (13)0.0141 (14)0.0073 (14)
C120.0468 (17)0.0317 (15)0.0478 (17)0.0072 (12)0.0152 (14)0.0047 (12)
C130.0370 (16)0.059 (2)0.0447 (17)−0.0138 (15)0.0005 (13)−0.0033 (15)
C140.0316 (14)0.074 (2)0.0516 (18)0.0067 (15)0.0024 (13)0.0168 (16)
C150.0334 (14)0.0333 (14)0.0441 (15)−0.0019 (11)0.0012 (12)0.0058 (12)
C160.0463 (16)0.055 (2)0.0462 (15)−0.0037 (14)0.0140 (13)0.0037 (14)
Cl1—C31.742 (3)C9—N101.506 (4)
O1—C151.258 (3)C9—C131.526 (4)
O2—C151.229 (3)C9—H90.9800
C1—C21.373 (4)N10—C161.482 (3)
C1—C61.394 (4)N10—C111.505 (4)
C1—H20.9300N10—H10X0.881 (17)
C2—C31.360 (4)C11—C141.511 (5)
C2—H30.9300C11—C121.520 (4)
C3—C41.378 (5)C11—H110.9800
C4—C51.380 (4)C12—H12A0.9700
C4—H40.9300C12—H12B0.9700
C5—C61.388 (4)C13—C141.530 (5)
C5—H50.9300C13—H13A0.9700
C6—C71.517 (4)C13—H13B0.9700
C7—C121.533 (4)C14—H14A0.9700
C7—C81.538 (4)C14—H14B0.9700
C7—H70.9800C16—H16A0.9599
C8—C151.542 (4)C16—H16B0.9599
C8—C91.544 (4)C16—H16C0.9599
C8—H80.9800
C2—C1—C6121.2 (3)C11—N10—C9101.8 (2)
C2—C1—H2119.4C16—N10—H10X112.8 (17)
C6—C1—H2119.4C11—N10—H10X110 (2)
C3—C2—C1119.7 (3)C9—N10—H10X104.4 (19)
C3—C2—H3120.1N10—C11—C14102.7 (3)
C1—C2—H3120.1N10—C11—C12106.7 (2)
C2—C3—C4121.4 (3)C14—C11—C12114.1 (3)
C2—C3—Cl1119.8 (2)N10—C11—H11111.0
C4—C3—Cl1118.8 (2)C14—C11—H11111.0
C3—C4—C5118.5 (3)C12—C11—H11111.0
C3—C4—H4120.8C11—C12—C7111.1 (2)
C5—C4—H4120.8C11—C12—H12A109.4
C4—C5—C6121.8 (3)C7—C12—H12A109.4
C4—C5—H5119.1C11—C12—H12B109.4
C6—C5—H5119.1C7—C12—H12B109.4
C5—C6—C1117.4 (3)H12A—C12—H12B108.0
C5—C6—C7119.7 (2)C9—C13—C14105.1 (3)
C1—C6—C7122.8 (2)C9—C13—H13A110.7
C6—C7—C12113.6 (2)C14—C13—H13A110.7
C6—C7—C8113.4 (2)C9—C13—H13B110.7
C12—C7—C8111.7 (2)C14—C13—H13B110.7
C6—C7—H7105.8H13A—C13—H13B108.8
C12—C7—H7105.8C11—C14—C13105.7 (2)
C8—C7—H7105.8C11—C14—H14A110.6
C7—C8—C15113.2 (2)C13—C14—H14A110.6
C7—C8—C9109.9 (2)C11—C14—H14B110.6
C15—C8—C9110.2 (2)C13—C14—H14B110.6
C7—C8—H8107.8H14A—C14—H14B108.7
C15—C8—H8107.8O2—C15—O1126.1 (3)
C9—C8—H8107.8O2—C15—C8118.2 (3)
N10—C9—C13102.5 (2)O1—C15—C8115.7 (2)
N10—C9—C8106.5 (2)N10—C16—H16A109.5
C13—C9—C8114.1 (2)N10—C16—H16B109.5
N10—C9—H9111.1H16A—C16—H16B109.5
C13—C9—H9111.1N10—C16—H16C109.5
C8—C9—H9111.1H16A—C16—H16C109.5
C16—N10—C11113.8 (2)H16B—C16—H16C109.5
C16—N10—C9113.5 (2)
C6—C1—C2—C31.0 (4)C13—C9—N10—C16−77.9 (3)
C1—C2—C3—C4−0.2 (4)C8—C9—N10—C16162.0 (2)
C1—C2—C3—Cl1−180.0 (2)C13—C9—N10—C1144.8 (3)
C2—C3—C4—C5−0.6 (4)C8—C9—N10—C11−75.3 (2)
Cl1—C3—C4—C5179.2 (2)C16—N10—C11—C1477.3 (3)
C3—C4—C5—C60.6 (5)C9—N10—C11—C14−45.3 (2)
C4—C5—C6—C10.2 (4)C16—N10—C11—C12−162.4 (2)
C4—C5—C6—C7−177.7 (3)C9—N10—C11—C1275.1 (3)
C2—C1—C6—C5−1.0 (4)N10—C11—C12—C7−62.0 (3)
C2—C1—C6—C7176.8 (3)C14—C11—C12—C750.7 (3)
C5—C6—C7—C12160.8 (2)C6—C7—C12—C11177.2 (2)
C1—C6—C7—C12−16.9 (4)C8—C7—C12—C1147.4 (3)
C5—C6—C7—C8−70.3 (3)N10—C9—C13—C14−27.1 (3)
C1—C6—C7—C8112.0 (3)C8—C9—C13—C1487.5 (3)
C6—C7—C8—C15−53.2 (3)N10—C11—C14—C1328.0 (3)
C12—C7—C8—C1576.6 (3)C12—C11—C14—C13−87.0 (3)
C6—C7—C8—C9−177.0 (2)C9—C13—C14—C11−0.5 (3)
C12—C7—C8—C9−47.1 (3)C7—C8—C15—O2109.1 (3)
C7—C8—C9—N1062.1 (2)C9—C8—C15—O2−127.3 (3)
C15—C8—C9—N10−63.3 (3)C7—C8—C15—O1−70.6 (3)
C7—C8—C9—C13−50.1 (3)C9—C8—C15—O153.0 (3)
C15—C8—C9—C13−175.6 (2)
D—H···AD—HH···AD···AD—H···A
N10—H10X···O10.881 (17)1.80 (2)2.599 (3)150 (3)
C9—H9···O1i0.982.283.148 (4)146
C16—H16A···O2ii0.962.483.282 (4)141
C14—H14A···O2iii0.972.543.439 (4)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N10—H10X⋯O10.881 (17)1.80 (2)2.599 (3)150 (3)
C9—H9⋯O1i0.982.283.148 (4)146
C16—H16A⋯O2ii0.962.483.282 (4)141
C14—H14A⋯O2iii0.972.543.439 (4)154

Symmetry codes: (i) ; (ii) ; (iii) .

  8 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  2-Carbomethoxy-3-aryl-8-oxabicyclo[3.2.1]octanes: potent non-nitrogen inhibitors of monoamine transporters.

Authors:  P C Meltzer; A Y Liang; P Blundell; M D Gonzalez; Z Chen; C George; B K Madras
Journal:  J Med Chem       Date:  1997-08-15       Impact factor: 7.446

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Synthesis and characterization of technetium-99m-labeled tropanes as dopamine transporter-imaging agents.

Authors:  S K Meegalla; K Plössl; M P Kung; S Chumpradit; D A Stevenson; S A Kushner; W T McElgin; P D Mozley; H F Kung
Journal:  J Med Chem       Date:  1997-01-03       Impact factor: 7.446

5.  Synthesis of 6- and 7- hydroxy-8-azabicyclo[3.2.1]octanes and their binding affinity for the dopamine and serotonin transporters.

Authors:  P C Meltzer; B Wang; Z Chen; P Blundell; M Jayaraman; M D Gonzalez; C George; B K Madras
Journal:  J Med Chem       Date:  2001-08-02       Impact factor: 7.446

6.  Compounds affecting the central nervous system. 4. 3 Beta-phenyltropane-2-carboxylic esters and analogs.

Authors:  R L Clarke; S J Daum; A J Gambino; M D Aceto; J Pearl; M Levitt; W R Cumiskey; E F Bogado
Journal:  J Med Chem       Date:  1973-11       Impact factor: 7.446

7.  Synthesis and monoamine transporter binding properties of 3alpha-(substituted phenyl)nortropane-2beta-carboxylic acid methyl esters. Norepinephrine transporter selective compounds.

Authors:  F Ivy Carroll; Sameer Tyagi; Bruce E Blough; Michael J Kuhar; Hernn A Navarro
Journal:  J Med Chem       Date:  2005-06-02       Impact factor: 7.446

8.  Synthesis, ligand binding, QSAR, and CoMFA study of 3 beta-(p-substituted phenyl)tropane-2 beta-carboxylic acid methyl esters.

Authors:  F I Carroll; Y G Gao; M A Rahman; P Abraham; K Parham; A H Lewin; J W Boja; M J Kuhar
Journal:  J Med Chem       Date:  1991-09       Impact factor: 7.446

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.