| Literature DB >> 21201677 |
Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.
Abstract
In the title compound, C(13)H(14)O(3)S, the methyl group of the methyl-sulfanyl substituent is almost perpendicular to the plane of the benzofuran fragment [80.5 (9)°]. The carboxylic acid groups are involved in inter-molecular O-H⋯O hydrogen bonds, which link the mol-ecules into centrosymmetric dimers. These dimers are further packed into stacks along the a axis by C-H⋯π inter-actions.Entities:
Year: 2008 PMID: 21201677 PMCID: PMC2960535 DOI: 10.1107/S1600536808024288
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H14O3S | |
| Monoclinic, | Mo |
| Hall symbol: -P_2ybc | Cell parameters from 4188 reflections |
| θ = 3.0–28.3º | |
| µ = 0.26 mm−1 | |
| β = 104.451 (2)º | Block, colorless |
| 0.40 × 0.20 × 0.10 mm | |
| Bruker SMART CCD diffractometer | 2595 independent reflections |
| Radiation source: fine-focus sealed tube | 2269 reflections with |
| Monochromator: graphite | |
| Detector resolution: 10.0 pixels mm-1 | θmax = 27.0º |
| θmin = 1.2º | |
| φ and ω scans | |
| Absorption correction: none | |
| 6673 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difmap (O-H) and geom (C-H) |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 2595 reflections | Δρmax = 0.42 e Å−3 |
| 161 parameters | Δρmin = −0.25 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S | 0.36076 (2) | 0.71244 (9) | 0.66542 (3) | 0.02429 (16) | |
| O1 | 0.22123 (6) | 0.3898 (3) | 0.81259 (8) | 0.0204 (3) | |
| O2 | 0.40090 (8) | 0.3577 (3) | 0.94500 (11) | 0.0324 (4) | |
| H2O | 0.4453 (16) | 0.310 (6) | 0.970 (2) | 0.049 (8)* | |
| O3 | 0.45128 (7) | 0.7710 (3) | 0.96729 (10) | 0.0284 (3) | |
| C1 | 0.29079 (9) | 0.5385 (3) | 0.70833 (12) | 0.0189 (4) | |
| C2 | 0.23677 (9) | 0.3392 (4) | 0.65574 (12) | 0.0189 (4) | |
| C3 | 0.21948 (10) | 0.2279 (4) | 0.56064 (13) | 0.0235 (4) | |
| H3 | 0.2463 | 0.2811 | 0.5129 | 0.028* | |
| C4 | 0.16167 (10) | 0.0365 (4) | 0.53846 (13) | 0.0252 (4) | |
| H4 | 0.1490 | −0.0418 | 0.4739 | 0.030* | |
| C5 | 0.12090 (10) | −0.0469 (4) | 0.60716 (13) | 0.0229 (4) | |
| C6 | 0.13800 (9) | 0.0629 (4) | 0.70363 (13) | 0.0209 (4) | |
| C7 | 0.19588 (9) | 0.2551 (3) | 0.72277 (12) | 0.0187 (4) | |
| C8 | 0.27891 (9) | 0.5601 (4) | 0.80010 (12) | 0.0192 (4) | |
| C9 | 0.05928 (11) | −0.2584 (4) | 0.57689 (16) | 0.0311 (5) | |
| H9A | 0.0729 | −0.4181 | 0.6195 | 0.047* | |
| H9B | 0.0543 | −0.3097 | 0.5074 | 0.047* | |
| H9C | 0.0105 | −0.1849 | 0.5841 | 0.047* | |
| C10 | 0.09738 (11) | −0.0203 (4) | 0.78102 (15) | 0.0316 (5) | |
| H10A | 0.1197 | 0.0752 | 0.8434 | 0.047* | |
| H10B | 0.1029 | −0.2159 | 0.7921 | 0.047* | |
| H10C | 0.0430 | 0.0256 | 0.7581 | 0.047* | |
| C11 | 0.31794 (10) | 0.7259 (4) | 0.88784 (13) | 0.0221 (4) | |
| H11A | 0.2865 | 0.7255 | 0.9370 | 0.026* | |
| H11B | 0.3218 | 0.9152 | 0.8663 | 0.026* | |
| C12 | 0.39713 (10) | 0.6221 (4) | 0.93705 (12) | 0.0197 (4) | |
| C13 | 0.43420 (11) | 0.4564 (4) | 0.68607 (16) | 0.0315 (4) | |
| H13A | 0.4529 | 0.4230 | 0.7576 | 0.047* | |
| H13B | 0.4766 | 0.5183 | 0.6592 | 0.047* | |
| H13C | 0.4130 | 0.2887 | 0.6526 | 0.047* |
| S | 0.0226 (3) | 0.0218 (3) | 0.0288 (3) | −0.00298 (17) | 0.00704 (18) | 0.00404 (18) |
| O1 | 0.0180 (6) | 0.0248 (7) | 0.0181 (6) | −0.0020 (5) | 0.0039 (4) | −0.0033 (5) |
| O2 | 0.0245 (7) | 0.0204 (7) | 0.0432 (8) | 0.0008 (5) | −0.0081 (6) | 0.0012 (6) |
| O3 | 0.0204 (6) | 0.0229 (7) | 0.0377 (7) | −0.0021 (5) | −0.0005 (5) | −0.0019 (6) |
| C1 | 0.0161 (8) | 0.0183 (8) | 0.0211 (8) | 0.0002 (6) | 0.0021 (6) | 0.0017 (7) |
| C2 | 0.0157 (8) | 0.0201 (9) | 0.0192 (8) | 0.0011 (6) | 0.0009 (6) | 0.0004 (7) |
| C3 | 0.0239 (9) | 0.0265 (10) | 0.0196 (8) | −0.0009 (7) | 0.0041 (7) | −0.0021 (7) |
| C4 | 0.0266 (9) | 0.0251 (10) | 0.0206 (8) | −0.0013 (7) | −0.0002 (7) | −0.0060 (7) |
| C5 | 0.0179 (8) | 0.0190 (9) | 0.0277 (9) | 0.0006 (6) | −0.0019 (7) | −0.0017 (7) |
| C6 | 0.0165 (8) | 0.0190 (9) | 0.0258 (9) | 0.0008 (6) | 0.0027 (6) | 0.0019 (7) |
| C7 | 0.0171 (8) | 0.0195 (9) | 0.0178 (8) | 0.0019 (6) | 0.0009 (6) | −0.0014 (7) |
| C8 | 0.0153 (8) | 0.0186 (9) | 0.0218 (8) | 0.0012 (6) | 0.0011 (6) | −0.0010 (7) |
| C9 | 0.0256 (10) | 0.0243 (10) | 0.0384 (11) | −0.0052 (7) | −0.0012 (8) | −0.0028 (8) |
| C10 | 0.0259 (10) | 0.0350 (11) | 0.0354 (10) | −0.0061 (8) | 0.0106 (8) | 0.0015 (9) |
| C11 | 0.0206 (9) | 0.0203 (9) | 0.0221 (8) | 0.0014 (7) | −0.0006 (7) | −0.0047 (7) |
| C12 | 0.0218 (9) | 0.0209 (9) | 0.0156 (7) | −0.0002 (7) | 0.0032 (6) | −0.0027 (7) |
| C13 | 0.0258 (10) | 0.0310 (11) | 0.0402 (11) | 0.0012 (8) | 0.0127 (8) | 0.0018 (9) |
| S—C1 | 1.7506 (17) | C5—C9 | 1.507 (2) |
| S—C13 | 1.803 (2) | C6—C7 | 1.388 (2) |
| O1—C8 | 1.383 (2) | C6—C10 | 1.502 (2) |
| O1—C7 | 1.387 (2) | C8—C11 | 1.491 (2) |
| O2—C12 | 1.312 (2) | C9—H9A | 0.9800 |
| O2—H2O | 0.83 (3) | C9—H9B | 0.9800 |
| O3—C12 | 1.212 (2) | C9—H9C | 0.9800 |
| C1—C8 | 1.348 (2) | C10—H10A | 0.9800 |
| C1—C2 | 1.449 (2) | C10—H10B | 0.9800 |
| C2—C7 | 1.388 (2) | C10—H10C | 0.9800 |
| C2—C3 | 1.392 (2) | C11—C12 | 1.512 (2) |
| C3—C4 | 1.385 (3) | C11—H11A | 0.9900 |
| C3—H3 | 0.9500 | C11—H11B | 0.9900 |
| C4—C5 | 1.404 (3) | C13—H13A | 0.9800 |
| C4—H4 | 0.9500 | C13—H13B | 0.9800 |
| C5—C6 | 1.407 (2) | C13—H13C | 0.9800 |
| C1—S—C13 | 99.52 (9) | C5—C9—H9A | 109.5 |
| C8—O1—C7 | 105.6 (1) | C5—C9—H9B | 109.5 |
| C12—O2—H2O | 110 (2) | H9A—C9—H9B | 109.5 |
| C8—C1—C2 | 106.5 (2) | C5—C9—H9C | 109.5 |
| C8—C1—S | 125.5 (1) | H9A—C9—H9C | 109.5 |
| C2—C1—S | 127.9 (1) | H9B—C9—H9C | 109.5 |
| C7—C2—C3 | 119.2 (2) | C6—C10—H10A | 109.5 |
| C7—C2—C1 | 105.6 (1) | C6—C10—H10B | 109.5 |
| C3—C2—C1 | 135.3 (2) | H10A—C10—H10B | 109.5 |
| C4—C3—C2 | 117.3 (2) | C6—C10—H10C | 109.5 |
| C4—C3—H3 | 121.3 | H10A—C10—H10C | 109.5 |
| C2—C3—H3 | 121.3 | H10B—C10—H10C | 109.5 |
| C3—C4—C5 | 122.9 (2) | C8—C11—C12 | 112.5 (1) |
| C3—C4—H4 | 118.6 | C8—C11—H11A | 109.1 |
| C5—C4—H4 | 118.6 | C12—C11—H11A | 109.1 |
| C4—C5—C6 | 120.4 (2) | C8—C11—H11B | 109.1 |
| C4—C5—C9 | 119.3 (2) | C12—C11—H11B | 109.1 |
| C6—C5—C9 | 120.3 (2) | H11A—C11—H11B | 107.8 |
| C7—C6—C5 | 115.0 (2) | O3—C12—O2 | 123.7 (2) |
| C7—C6—C10 | 121.9 (2) | O3—C12—C11 | 122.7 (2) |
| C5—C6—C10 | 123.1 (2) | O2—C12—C11 | 113.5 (2) |
| O1—C7—C6 | 124.4 (2) | S—C13—H13A | 109.5 |
| O1—C7—C2 | 110.4 (1) | S—C13—H13B | 109.5 |
| C6—C7—C2 | 125.3 (2) | H13A—C13—H13B | 109.5 |
| C1—C8—O1 | 111.9 (2) | S—C13—H13C | 109.5 |
| C1—C8—C11 | 131.4 (2) | H13A—C13—H13C | 109.5 |
| O1—C8—C11 | 116.7 (2) | H13B—C13—H13C | 109.5 |
| C13—S—C1—C8 | 96.66 (17) | C10—C6—C7—O1 | −0.7 (3) |
| C13—S—C1—C2 | −80.90 (17) | C5—C6—C7—C2 | −0.8 (3) |
| C8—C1—C2—C7 | −0.11 (19) | C10—C6—C7—C2 | 178.93 (17) |
| S—C1—C2—C7 | 177.82 (13) | C3—C2—C7—O1 | −179.69 (15) |
| C8—C1—C2—C3 | 179.6 (2) | C1—C2—C7—O1 | 0.06 (18) |
| S—C1—C2—C3 | −2.5 (3) | C3—C2—C7—C6 | 0.6 (3) |
| C7—C2—C3—C4 | −0.1 (3) | C1—C2—C7—C6 | −179.65 (16) |
| C1—C2—C3—C4 | −179.80 (19) | C2—C1—C8—O1 | 0.13 (19) |
| C2—C3—C4—C5 | 0.0 (3) | S—C1—C8—O1 | −177.87 (12) |
| C3—C4—C5—C6 | −0.3 (3) | C2—C1—C8—C11 | 178.24 (17) |
| C3—C4—C5—C9 | −179.47 (17) | S—C1—C8—C11 | 0.2 (3) |
| C4—C5—C6—C7 | 0.7 (2) | C7—O1—C8—C1 | −0.09 (18) |
| C9—C5—C6—C7 | 179.84 (16) | C7—O1—C8—C11 | −178.51 (14) |
| C4—C5—C6—C10 | −179.11 (17) | C1—C8—C11—C12 | −72.5 (2) |
| C9—C5—C6—C10 | 0.1 (3) | O1—C8—C11—C12 | 105.56 (17) |
| C8—O1—C7—C6 | 179.73 (16) | C8—C11—C12—O3 | 138.89 (18) |
| C8—O1—C7—C2 | 0.01 (18) | C8—C11—C12—O2 | −42.1 (2) |
| C5—C6—C7—O1 | 179.48 (15) |
| H··· | ||||
| C9—H9A···Cgi | 0.98 | 2.86 | 3.617 (2) | 135 |
| O2—H2O···O3ii | 0.83 (3) | 1.89 (3) | 2.717 (2) | 175 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C9—H9 | 0.98 | 2.86 | 3.617 (2) | 135 |
| O2—H2 | 0.83 (3) | 1.89 (3) | 2.717 (2) | 175 (3) |
Symmetry codes: (ii) (i) ; . Cg is the centroid of the C2–C7 benzene ring.