Literature DB >> 21201635

cis-Bis-[2-(diphenyl-phosphino)benzene-thiolato-κP,S]palladium(II).

Jaime Fierro-Arias1, David Morales-Morales, Simón Hernández-Ortega.   

Abstract

The title compound, [Pd(C(18)H(14)PS)(2)], was synthesized by the reaction of (Ph(2)PC(6)H(4)SH) with [PdCl(2)(NCC(6)H(5))(2)] in a 2:1 molar ratio in the presence of a slight excess of NEt(3 )as base in dichloro-methane. The compound crystallizes with the Pd(II) atom on a twofold rotation axis. The palladium center has a slightly distorted square-planar environment, with the two P-S chelating ligands adopting a cis configuration. The present structure is a pseudo-polymorph of [Pd(C(18)H(14)PS)(2)]·CH(2)Cl(2).

Entities:  

Year:  2008        PMID: 21201635      PMCID: PMC2960604          DOI: 10.1107/S1600536808026718

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Andreasen et al. (1999 ▶); Braunstein & Naud (2001 ▶); Real et al. (2000 ▶); Canseco-Gonzalez et al. (2003 ▶, 2004 ▶); Dilworth & Weatley (2000 ▶); Dilworth et al. (2000 ▶); Gómez-Benítez et al. (2003 ▶, 2007a ▶,b ▶); Morales-Morales et al. (2002a ▶,b ▶); Ortner et al. (2000 ▶); Ríos-Moreno et al. (2005 ▶); Taguchi et al. (1999 ▶).

Experimental

Crystal data

[Pd(C18H14PS)2] M = 693.04 Trigonal, a = 9.306 (1) Å c = 30.069 (8) Å V = 2255.2 (7) Å3 Z = 3 Mo Kα radiation μ = 0.89 mm−1 T = 298 (2) K 0.16 × 0.07 × 0.04 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.877, T max = 0.967 18737 measured reflections 2749 independent reflections 1811 reflections with I > 2σ(I) R int = 0.113

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.084 S = 0.82 2749 reflections 186 parameters H-atom parameters constrained Δρmax = 1.40 e Å−3 Δρmin = −0.31 e Å−3 Absolute structure: Flack (1983 ▶), 1113 Friedel Pairs Flack parameter: −0.05 (6) Data collection: SMART (Bruker, 1999 ▶); cell refinement: SAINT (Bruker, 1999 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I. DOI: 10.1107/S1600536808026718/bt2741sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808026718/bt2741Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Pd(C18H14PS)2]Z = 3
Mr = 693.04F000 = 1056
Trigonal, P3221Dx = 1.531 Mg m3
Hall symbol: P 32 2"Mo Kα radiation λ = 0.71073 Å
a = 9.306 (1) ÅCell parameters from 2935 reflections
b = 9.306 (1) Åθ = 2.5–19.9º
c = 30.069 (8) ŵ = 0.89 mm1
α = 90ºT = 298 (2) K
β = 90ºPrism, yellow
γ = 120º0.16 × 0.07 × 0.04 mm
V = 2255.2 (7) Å3
Bruker SMART APEX CCD area-detector diffractometer2749 independent reflections
Radiation source: fine-focus sealed tube1811 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.113
Detector resolution: 0.83 pixels mm-1θmax = 25.3º
T = 298(2) Kθmin = 2.0º
ω scansh = −11→11
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)k = −11→11
Tmin = 0.877, Tmax = 0.967l = −36→36
18737 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.046  w = 1/[σ2(Fo2) + (0.025P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.084(Δ/σ)max = 0.001
S = 0.82Δρmax = 1.40 e Å3
2749 reflectionsΔρmin = −0.31 e Å3
186 parametersExtinction correction: none
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), 1113 Friedel Pairs
Secondary atom site location: difference Fourier mapFlack parameter: −0.05 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Pd0.48559 (7)0.48559 (7)0.00000.0377 (2)
P10.2993 (2)0.3605 (2)0.05647 (6)0.0399 (5)
S10.6481 (2)0.6901 (2)0.05082 (7)0.0592 (6)
C10.5327 (8)0.6409 (8)0.0997 (2)0.0408 (18)
C20.3770 (9)0.4982 (8)0.1037 (2)0.0397 (18)
C30.2892 (10)0.4667 (9)0.1433 (2)0.060 (2)
H30.18540.37190.14580.072*
C40.3528 (12)0.5730 (12)0.1790 (2)0.072 (3)
H40.29180.55090.20510.086*
C50.5077 (12)0.7126 (11)0.1757 (3)0.069 (3)
H50.55260.78370.19990.083*
C60.5958 (10)0.7467 (9)0.1367 (2)0.059 (2)
H60.69950.84190.13470.070*
C70.2670 (9)0.1641 (8)0.0782 (2)0.0457 (19)
C80.1239 (11)0.0432 (10)0.0973 (3)0.076 (3)
H80.03170.05700.09870.091*
C90.1143 (15)−0.0996 (12)0.1145 (3)0.095 (3)
H90.0142−0.18080.12650.114*
C100.2415 (15)−0.1239 (12)0.1144 (3)0.083 (3)
H100.2336−0.21820.12750.100*
C110.3848 (12)−0.0089 (12)0.0949 (3)0.085 (3)
H110.4754−0.02540.09390.102*
C120.3967 (11)0.1320 (11)0.0765 (2)0.064 (2)
H120.49490.20790.06250.077*
C130.0948 (8)0.3330 (8)0.0457 (2)0.0414 (19)
C140.0640 (11)0.4611 (12)0.0535 (2)0.064 (2)
H140.14500.55700.06730.076*
C15−0.0844 (10)0.4507 (12)0.0413 (3)0.065 (3)
H15−0.10310.53860.04650.078*
C16−0.2044 (12)0.3062 (16)0.0212 (3)0.094 (4)
H16−0.30330.29800.01180.113*
C17−0.1781 (11)0.1752 (13)0.0151 (3)0.105 (3)
H17−0.26090.07660.00290.125*
C18−0.0297 (10)0.1907 (11)0.0272 (3)0.080 (3)
H18−0.01270.10140.02280.096*
U11U22U33U12U13U23
Pd0.0332 (3)0.0332 (3)0.0451 (4)0.0155 (4)−0.0016 (2)0.0016 (2)
P10.0406 (11)0.0357 (12)0.0438 (12)0.0193 (9)−0.0009 (9)0.0022 (9)
S10.0476 (13)0.0509 (13)0.0634 (14)0.0129 (10)−0.0031 (10)−0.0121 (11)
C10.051 (5)0.038 (4)0.042 (4)0.029 (4)−0.011 (4)−0.002 (3)
C20.050 (5)0.041 (4)0.037 (4)0.029 (4)−0.002 (4)0.000 (3)
C30.094 (7)0.061 (5)0.034 (5)0.046 (5)−0.007 (5)−0.002 (4)
C40.105 (8)0.091 (7)0.038 (5)0.064 (7)0.003 (5)0.005 (5)
C50.105 (8)0.067 (6)0.048 (6)0.053 (6)−0.025 (5)−0.019 (5)
C60.057 (6)0.057 (5)0.062 (5)0.029 (5)−0.010 (5)−0.018 (4)
C70.050 (5)0.035 (5)0.042 (4)0.014 (4)0.003 (3)0.002 (3)
C80.073 (6)0.046 (6)0.111 (7)0.033 (5)0.040 (5)0.031 (5)
C90.119 (10)0.055 (7)0.103 (8)0.038 (7)0.040 (8)0.039 (6)
C100.138 (9)0.044 (6)0.069 (6)0.046 (7)−0.023 (6)0.000 (5)
C110.096 (8)0.079 (8)0.100 (8)0.059 (7)−0.039 (6)−0.006 (6)
C120.046 (6)0.064 (6)0.082 (6)0.027 (4)−0.004 (5)0.011 (5)
C130.040 (4)0.039 (5)0.040 (4)0.016 (4)0.010 (3)0.003 (3)
C140.063 (6)0.071 (7)0.060 (5)0.036 (5)0.014 (5)0.023 (5)
C150.056 (5)0.096 (8)0.065 (6)0.055 (6)0.005 (4)0.012 (5)
C160.068 (7)0.185 (13)0.059 (6)0.085 (9)0.018 (5)0.027 (7)
C170.053 (6)0.153 (10)0.119 (7)0.060 (7)−0.031 (6)−0.039 (7)
C180.059 (6)0.095 (8)0.095 (7)0.045 (6)−0.012 (5)−0.021 (6)
Pd—P1i2.2861 (18)C8—C91.386 (10)
Pd—P12.2861 (18)C8—H80.9300
Pd—S12.316 (2)C9—C101.312 (10)
Pd—S1i2.316 (2)C9—H90.9300
P1—C21.805 (7)C10—C111.358 (11)
P1—C71.818 (7)C10—H100.9300
P1—C131.818 (7)C11—C121.375 (10)
S1—C11.740 (7)C11—H110.9300
C1—C21.398 (8)C12—H120.9300
C1—C61.405 (8)C13—C181.367 (9)
C2—C31.390 (9)C13—C141.379 (9)
C3—C41.376 (9)C14—C151.384 (9)
C3—H30.9300C14—H140.9300
C4—C51.379 (11)C15—C161.386 (11)
C4—H40.9300C15—H150.9300
C5—C61.374 (9)C16—C171.369 (12)
C5—H50.9300C16—H160.9300
C6—H60.9300C17—C181.364 (10)
C7—C81.368 (9)C17—H170.9300
C7—C121.382 (8)C18—H180.9300
P1i—Pd—P1101.33 (9)C7—C8—C9121.0 (9)
P1i—Pd—S1171.41 (7)C7—C8—H8119.5
P1—Pd—S186.90 (7)C9—C8—H8119.5
P1i—Pd—S1i86.90 (7)C10—C9—C8122.2 (11)
P1—Pd—S1i171.41 (7)C10—C9—H9118.9
S1—Pd—S1i85.00 (11)C8—C9—H9118.9
C2—P1—C7103.7 (3)C9—C10—C11118.7 (11)
C2—P1—C13105.1 (3)C9—C10—H10120.6
C7—P1—C13106.7 (3)C11—C10—H10120.6
C2—P1—Pd106.9 (2)C10—C11—C12120.3 (10)
C7—P1—Pd118.7 (2)C10—C11—H11119.9
C13—P1—Pd114.4 (2)C12—C11—H11119.9
C1—S1—Pd106.1 (2)C11—C12—C7122.0 (9)
C2—C1—C6117.9 (7)C11—C12—H12119.0
C2—C1—S1122.3 (5)C7—C12—H12119.0
C6—C1—S1119.8 (6)C18—C13—C14117.7 (7)
C3—C2—C1119.7 (6)C18—C13—P1122.0 (6)
C3—C2—P1122.7 (6)C14—C13—P1120.2 (6)
C1—C2—P1117.6 (6)C13—C14—C15121.8 (10)
C4—C3—C2121.3 (8)C13—C14—H14119.1
C4—C3—H3119.3C15—C14—H14119.1
C2—C3—H3119.3C14—C15—C16118.3 (10)
C3—C4—C5119.5 (8)C14—C15—H15120.8
C3—C4—H4120.2C16—C15—H15120.8
C5—C4—H4120.2C17—C16—C15120.4 (9)
C6—C5—C4120.0 (7)C17—C16—H16119.8
C6—C5—H5120.0C15—C16—H16119.8
C4—C5—H5120.0C18—C17—C16119.5 (10)
C5—C6—C1121.5 (7)C18—C17—H17120.3
C5—C6—H6119.2C16—C17—H17120.3
C1—C6—H6119.2C17—C18—C13122.2 (8)
C8—C7—C12115.7 (8)C17—C18—H18118.9
C8—C7—P1125.5 (6)C13—C18—H18118.9
C12—C7—P1118.8 (6)
P1i—Pd—P1—C2−177.7 (2)S1—C1—C6—C5179.5 (6)
S1—Pd—P1—C24.8 (2)C2—P1—C7—C889.7 (7)
S1i—Pd—P1—C2−14.7 (6)C13—P1—C7—C8−21.0 (8)
P1i—Pd—P1—C765.6 (2)Pd—P1—C7—C8−152.0 (6)
S1—Pd—P1—C7−111.9 (3)C2—P1—C7—C12−89.0 (7)
S1i—Pd—P1—C7−131.4 (5)C13—P1—C7—C12160.3 (6)
P1i—Pd—P1—C13−61.9 (2)Pd—P1—C7—C1229.3 (7)
S1—Pd—P1—C13120.6 (3)C12—C7—C8—C91.4 (12)
S1i—Pd—P1—C13101.1 (5)P1—C7—C8—C9−177.3 (7)
P1i—Pd—S1—C1−167.4 (5)C7—C8—C9—C101.8 (16)
P1—Pd—S1—C1−4.1 (2)C8—C9—C10—C11−3.2 (18)
S1i—Pd—S1—C1173.0 (2)C9—C10—C11—C121.5 (16)
Pd—S1—C1—C22.5 (6)C10—C11—C12—C71.8 (14)
Pd—S1—C1—C6−177.4 (5)C8—C7—C12—C11−3.1 (12)
C6—C1—C2—C31.0 (10)P1—C7—C12—C11175.7 (6)
S1—C1—C2—C3−178.9 (5)C2—P1—C13—C18−150.7 (6)
C6—C1—C2—P1−178.5 (5)C7—P1—C13—C18−40.9 (7)
S1—C1—C2—P11.6 (8)Pd—P1—C13—C1892.5 (6)
C7—P1—C2—C3−58.1 (6)C2—P1—C13—C1433.4 (6)
C13—P1—C2—C353.8 (6)C7—P1—C13—C14143.1 (5)
Pd—P1—C2—C3175.7 (5)Pd—P1—C13—C14−83.5 (6)
C7—P1—C2—C1121.4 (6)C18—C13—C14—C15−3.0 (11)
C13—P1—C2—C1−126.8 (5)P1—C13—C14—C15173.1 (6)
Pd—P1—C2—C1−4.9 (6)C13—C14—C15—C160.7 (12)
C1—C2—C3—C4−0.3 (11)C14—C15—C16—C172.4 (14)
P1—C2—C3—C4179.1 (6)C15—C16—C17—C18−3.0 (14)
C2—C3—C4—C5−0.9 (11)C16—C17—C18—C130.5 (14)
C3—C4—C5—C61.5 (12)C14—C13—C18—C172.4 (12)
C4—C5—C6—C1−0.8 (11)P1—C13—C18—C17−173.6 (6)
C2—C1—C6—C5−0.4 (10)
Pd—P12.2861 (18)
Pd—S12.316 (2)
P1i—Pd—P1101.33 (9)
P1i—Pd—S1171.41 (7)
P1—Pd—S186.90 (7)
S1—Pd—S1i85.00 (11)

Symmetry code: (i) .

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1.  rac-Carbon-yl{1-[(diphenyl-phosphino)meth-yl]ethanethiol-ato}(triphenyl-phosphine)rhodium(I).

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2.  [2-(Diphenyl-phosphan-yl)benzene-thiol-ato-κP,S](pyridine-2-thiol-ato-κS)(triphenyl-phosphine-κP)palladium(II).

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