| Literature DB >> 21201625 |
Wei-Li Shang1, Yan Bai, Chao-Zhong Ma, Zhi-Min Li.
Abstract
In the title complex, [Co(NCS)(2)(C(6)Entities:
Year: 2008 PMID: 21201625 PMCID: PMC2960658 DOI: 10.1107/S160053680802357X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(NCS)2(C6H12N4)(CH4O)2(H2O)] | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 7990 reflections |
| θ = 2.3–28.3º | |
| µ = 1.25 mm−1 | |
| Block, purple | |
| 0.30 × 0.30 × 0.25 mm |
| Bruker APEXII diffractometer | 4287 independent reflections |
| Radiation source: sealed tube | 3528 reflections with |
| Monochromator: graphite | |
| θmax = 28.3º | |
| φ and ω scans | θmin = 2.3º |
| Absorption correction: multi-scan(SADABS; Bruker, 2000) | |
| 20785 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max = 0.001 | |
| 4287 reflections | Δρmax = 0.64 e Å−3 |
| 217 parameters | Δρmin = −0.61 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Co1 | 0.553065 (15) | 1.038335 (14) | 0.283547 (14) | 0.02795 (7) | |
| N1 | 0.65439 (11) | 0.97495 (10) | 0.35331 (10) | 0.0373 (3) | |
| C1 | 0.71280 (12) | 0.94096 (11) | 0.39145 (11) | 0.0309 (3) | |
| S1 | 0.79561 (4) | 0.89311 (4) | 0.44512 (4) | 0.05772 (17) | |
| N2 | 0.45742 (11) | 1.10745 (11) | 0.21469 (10) | 0.0412 (4) | |
| C2 | 0.40515 (12) | 1.14790 (11) | 0.17538 (10) | 0.0318 (3) | |
| S2 | 0.33147 (4) | 1.20788 (3) | 0.12175 (3) | 0.04690 (13) | |
| N3 | 0.43978 (9) | 0.94296 (9) | 0.32720 (8) | 0.0262 (3) | |
| N4 | 0.27067 (9) | 0.91344 (9) | 0.34713 (9) | 0.0310 (3) | |
| N5 | 0.38399 (10) | 0.86701 (9) | 0.45350 (9) | 0.0329 (3) | |
| N6 | 0.37919 (10) | 0.79376 (9) | 0.31828 (9) | 0.0320 (3) | |
| C3 | 0.34122 (11) | 0.97472 (10) | 0.31390 (11) | 0.0295 (3) | |
| H3A | 0.3336 | 1.0306 | 0.3412 | 0.035* | |
| H3B | 0.3304 | 0.9829 | 0.2545 | 0.035* | |
| C4 | 0.45227 (12) | 0.92901 (11) | 0.41871 (10) | 0.0311 (3) | |
| H4A | 0.5159 | 0.9078 | 0.4291 | 0.037* | |
| H4B | 0.4455 | 0.9843 | 0.4473 | 0.037* | |
| C5 | 0.44845 (11) | 0.85686 (11) | 0.28545 (10) | 0.0301 (3) | |
| H5A | 0.4387 | 0.8639 | 0.2258 | 0.036* | |
| H5B | 0.5120 | 0.8344 | 0.2939 | 0.036* | |
| C6 | 0.28784 (12) | 0.90063 (12) | 0.43761 (10) | 0.0359 (4) | |
| H6A | 0.2798 | 0.9556 | 0.4665 | 0.043* | |
| H6B | 0.2416 | 0.8600 | 0.4597 | 0.043* | |
| C7 | 0.28332 (12) | 0.82913 (11) | 0.30472 (11) | 0.0341 (4) | |
| H7A | 0.2726 | 0.8364 | 0.2452 | 0.041* | |
| H7B | 0.2368 | 0.7881 | 0.3257 | 0.041* | |
| C8 | 0.39459 (13) | 0.78357 (11) | 0.40908 (11) | 0.0355 (4) | |
| H8A | 0.3493 | 0.7420 | 0.4312 | 0.043* | |
| H8B | 0.4577 | 0.7607 | 0.4188 | 0.043* | |
| O1 | 0.52358 (11) | 1.12213 (8) | 0.39015 (8) | 0.0416 (3) | |
| H1 | 0.5632 (16) | 1.1230 (15) | 0.4256 (16) | 0.054 (7)* | |
| C9 | 0.4697 (2) | 1.19973 (17) | 0.39250 (16) | 0.0775 (9) | |
| H9A | 0.4301 | 1.1996 | 0.4413 | 0.116* | |
| H9D | 0.4308 | 1.2033 | 0.3433 | 0.116* | |
| H9B | 0.5116 | 1.2489 | 0.3945 | 0.116* | |
| O2 | 0.58559 (9) | 0.95999 (9) | 0.17962 (8) | 0.0368 (3) | |
| H2 | 0.6396 (16) | 0.9493 (13) | 0.1762 (13) | 0.039 (6)* | |
| C10 | 0.54971 (15) | 0.97087 (17) | 0.09672 (13) | 0.0556 (6) | |
| H10D | 0.5700 | 0.9230 | 0.0625 | 0.083* | |
| H10A | 0.5733 | 1.0243 | 0.0737 | 0.083* | |
| H10B | 0.4817 | 0.9726 | 0.0983 | 0.083* | |
| O1W | 0.66088 (11) | 1.12763 (9) | 0.24788 (10) | 0.0439 (3) | |
| H1WA | 0.6425 (17) | 1.1713 (16) | 0.2319 (16) | 0.054 (7)* | |
| H1WB | 0.7014 (18) | 1.1426 (16) | 0.2873 (16) | 0.063 (8)* |
| Co1 | 0.02528 (12) | 0.02913 (12) | 0.02945 (12) | 0.00166 (8) | −0.00442 (8) | 0.00671 (8) |
| N1 | 0.0328 (8) | 0.0382 (8) | 0.0408 (8) | 0.0019 (6) | −0.0058 (6) | 0.0072 (6) |
| C1 | 0.0299 (8) | 0.0296 (8) | 0.0333 (8) | −0.0020 (6) | −0.0040 (7) | −0.0008 (6) |
| S1 | 0.0564 (3) | 0.0461 (3) | 0.0707 (4) | 0.0114 (2) | −0.0366 (3) | −0.0015 (3) |
| N2 | 0.0362 (8) | 0.0436 (9) | 0.0437 (9) | 0.0042 (7) | −0.0059 (7) | 0.0111 (7) |
| C2 | 0.0306 (8) | 0.0336 (8) | 0.0314 (8) | −0.0002 (7) | −0.0020 (7) | 0.0022 (7) |
| S2 | 0.0437 (3) | 0.0503 (3) | 0.0468 (3) | 0.0126 (2) | −0.0123 (2) | 0.0089 (2) |
| N3 | 0.0253 (6) | 0.0283 (7) | 0.0251 (6) | −0.0001 (5) | −0.0025 (5) | 0.0014 (5) |
| N4 | 0.0265 (7) | 0.0330 (7) | 0.0336 (7) | 0.0002 (5) | 0.0006 (6) | −0.0010 (6) |
| N5 | 0.0338 (7) | 0.0373 (8) | 0.0277 (7) | −0.0022 (6) | 0.0008 (6) | 0.0043 (6) |
| N6 | 0.0356 (7) | 0.0268 (7) | 0.0336 (7) | −0.0008 (6) | 0.0021 (6) | −0.0015 (6) |
| C3 | 0.0284 (8) | 0.0286 (8) | 0.0314 (8) | 0.0024 (6) | −0.0020 (6) | 0.0011 (6) |
| C4 | 0.0327 (9) | 0.0363 (9) | 0.0243 (7) | −0.0034 (7) | −0.0044 (6) | 0.0020 (6) |
| C5 | 0.0307 (8) | 0.0299 (8) | 0.0297 (8) | 0.0017 (6) | 0.0031 (6) | −0.0018 (6) |
| C6 | 0.0335 (9) | 0.0435 (10) | 0.0308 (8) | 0.0009 (7) | 0.0065 (7) | −0.0010 (7) |
| C7 | 0.0314 (9) | 0.0346 (9) | 0.0364 (9) | −0.0058 (7) | −0.0025 (7) | −0.0032 (7) |
| C8 | 0.0379 (9) | 0.0310 (8) | 0.0377 (9) | −0.0003 (7) | 0.0013 (7) | 0.0075 (7) |
| O1 | 0.0519 (8) | 0.0371 (7) | 0.0358 (7) | 0.0080 (6) | −0.0109 (6) | −0.0021 (5) |
| C9 | 0.116 (2) | 0.0597 (15) | 0.0565 (15) | 0.0428 (15) | −0.0207 (15) | −0.0112 (12) |
| O2 | 0.0253 (6) | 0.0531 (8) | 0.0319 (6) | 0.0018 (5) | −0.0003 (5) | 0.0017 (5) |
| C10 | 0.0418 (12) | 0.0907 (18) | 0.0343 (10) | 0.0045 (11) | −0.0045 (8) | 0.0006 (10) |
| O1W | 0.0411 (8) | 0.0344 (7) | 0.0562 (9) | −0.0044 (6) | −0.0076 (7) | 0.0132 (7) |
| Co1—N2 | 2.0400 (15) | C3—H3B | 0.9700 |
| Co1—N1 | 2.0585 (15) | C4—H4A | 0.9700 |
| Co1—O2 | 2.1024 (13) | C4—H4B | 0.9700 |
| Co1—O1W | 2.1268 (14) | C5—H5A | 0.9700 |
| Co1—O1 | 2.1760 (13) | C5—H5B | 0.9700 |
| Co1—N3 | 2.2785 (13) | C6—H6A | 0.9700 |
| N1—C1 | 1.151 (2) | C6—H6B | 0.9700 |
| C1—S1 | 1.6256 (17) | C7—H7A | 0.9700 |
| N2—C2 | 1.151 (2) | C7—H7B | 0.9700 |
| C2—S2 | 1.6327 (17) | C8—H8A | 0.9700 |
| N3—C5 | 1.487 (2) | C8—H8B | 0.9700 |
| N3—C4 | 1.489 (2) | O1—C9 | 1.415 (2) |
| N3—C3 | 1.489 (2) | O1—H1 | 0.80 (2) |
| N4—C3 | 1.470 (2) | C9—H9A | 0.9600 |
| N4—C7 | 1.473 (2) | C9—H9D | 0.9600 |
| N4—C6 | 1.480 (2) | C9—H9B | 0.9600 |
| N5—C4 | 1.465 (2) | O2—C10 | 1.428 (2) |
| N5—C8 | 1.473 (2) | O2—H2 | 0.78 (2) |
| N5—C6 | 1.474 (2) | C10—H10D | 0.9600 |
| N6—C5 | 1.473 (2) | C10—H10A | 0.9600 |
| N6—C7 | 1.474 (2) | C10—H10B | 0.9600 |
| N6—C8 | 1.476 (2) | O1W—H1WA | 0.76 (3) |
| C3—H3A | 0.9700 | O1W—H1WB | 0.88 (3) |
| N2—Co1—N1 | 176.69 (6) | N6—C5—N3 | 111.79 (12) |
| N2—Co1—O2 | 90.94 (6) | N6—C5—H5A | 109.3 |
| N1—Co1—O2 | 90.31 (6) | N3—C5—H5A | 109.3 |
| N2—Co1—O1W | 89.59 (6) | N6—C5—H5B | 109.3 |
| N1—Co1—O1W | 87.34 (6) | N3—C5—H5B | 109.3 |
| O2—Co1—O1W | 90.09 (6) | H5A—C5—H5B | 107.9 |
| N2—Co1—O1 | 89.30 (6) | N5—C6—N4 | 111.46 (13) |
| N1—Co1—O1 | 89.35 (6) | N5—C6—H6A | 109.3 |
| O2—Co1—O1 | 178.06 (6) | N4—C6—H6A | 109.3 |
| O1W—Co1—O1 | 87.99 (6) | N5—C6—H6B | 109.3 |
| N2—Co1—N3 | 92.06 (6) | N4—C6—H6B | 109.3 |
| N1—Co1—N3 | 90.98 (5) | H6A—C6—H6B | 108.0 |
| O2—Co1—N3 | 91.53 (5) | N4—C7—N6 | 111.58 (13) |
| O1W—Co1—N3 | 177.67 (6) | N4—C7—H7A | 109.3 |
| O1—Co1—N3 | 90.39 (5) | N6—C7—H7A | 109.3 |
| C1—N1—Co1 | 178.20 (15) | N4—C7—H7B | 109.3 |
| N1—C1—S1 | 179.8 (2) | N6—C7—H7B | 109.3 |
| C2—N2—Co1 | 178.33 (16) | H7A—C7—H7B | 108.0 |
| N2—C2—S2 | 178.14 (17) | N5—C8—N6 | 111.51 (13) |
| C5—N3—C4 | 107.64 (13) | N5—C8—H8A | 109.3 |
| C5—N3—C3 | 107.72 (12) | N6—C8—H8A | 109.3 |
| C4—N3—C3 | 107.34 (12) | N5—C8—H8B | 109.3 |
| C5—N3—Co1 | 112.16 (9) | N6—C8—H8B | 109.3 |
| C4—N3—Co1 | 108.08 (9) | H8A—C8—H8B | 108.0 |
| C3—N3—Co1 | 113.63 (9) | C9—O1—Co1 | 128.49 (13) |
| C3—N4—C7 | 108.37 (13) | C9—O1—H1 | 110.2 (17) |
| C3—N4—C6 | 109.12 (13) | Co1—O1—H1 | 115.6 (17) |
| C7—N4—C6 | 108.23 (13) | O1—C9—H9A | 109.5 |
| C4—N5—C8 | 108.45 (13) | O1—C9—H9D | 109.5 |
| C4—N5—C6 | 108.18 (13) | H9A—C9—H9D | 109.5 |
| C8—N5—C6 | 108.39 (14) | O1—C9—H9B | 109.5 |
| C5—N6—C7 | 108.29 (13) | H9A—C9—H9B | 109.5 |
| C5—N6—C8 | 108.81 (13) | H9D—C9—H9B | 109.5 |
| C7—N6—C8 | 108.60 (13) | C10—O2—Co1 | 126.06 (13) |
| N4—C3—N3 | 111.79 (12) | C10—O2—H2 | 107.8 (16) |
| N4—C3—H3A | 109.3 | Co1—O2—H2 | 112.9 (16) |
| N3—C3—H3A | 109.3 | O2—C10—H10D | 109.5 |
| N4—C3—H3B | 109.3 | O2—C10—H10A | 109.5 |
| N3—C3—H3B | 109.3 | H10D—C10—H10A | 109.5 |
| H3A—C3—H3B | 107.9 | O2—C10—H10B | 109.5 |
| N5—C4—N3 | 112.87 (13) | H10D—C10—H10B | 109.5 |
| N5—C4—H4A | 109.0 | H10A—C10—H10B | 109.5 |
| N3—C4—H4A | 109.0 | Co1—O1W—H1WA | 114.4 (19) |
| N5—C4—H4B | 109.0 | Co1—O1W—H1WB | 116.1 (16) |
| N3—C4—H4B | 109.0 | H1WA—O1W—H1WB | 103 (2) |
| H4A—C4—H4B | 107.8 |
| H··· | ||||
| C4—H4A···N1 | 0.97 | 2.52 | 3.119 (2) | 120 |
| C4—H4B···O1 | 0.97 | 2.56 | 3.167 (2) | 121 |
| C9—H9D···N2 | 0.96 | 2.56 | 3.181 (3) | 123 |
| O1—H1···N5i | 0.80 (2) | 2.08 (3) | 2.824 (2) | 156 (2) |
| O1W—H1WA···N6ii | 0.76 (2) | 2.07 (2) | 2.821 (2) | 168 (3) |
| O2—H2···N4iii | 0.78 (2) | 1.97 (2) | 2.7417 (18) | 172 (2) |
| O1W—H1WB···S2iii | 0.88 (3) | 2.55 (3) | 3.4146 (16) | 168 (2) |
| Co1—N2 | 2.0400 (15) |
| Co1—N1 | 2.0585 (15) |
| Co1—O2 | 2.1024 (13) |
| Co1—O1 | 2.1268 (14) |
| Co1—O1 | 2.1760 (13) |
| Co1—N3 | 2.2785 (13) |
| N2—Co1—N1 | 176.69 (6) |
| N2—Co1—O2 | 90.94 (6) |
| N1—Co1—O2 | 90.31 (6) |
| N2—Co1—O1 | 89.59 (6) |
| N1—Co1—O1 | 87.34 (6) |
| O2—Co1—O1 | 90.09 (6) |
| N2—Co1—O1 | 89.30 (6) |
| N1—Co1—O1 | 89.35 (6) |
| O2—Co1—O1 | 178.06 (6) |
| O1 | 87.99 (6) |
| N2—Co1—N3 | 92.06 (6) |
| N1—Co1—N3 | 90.98 (5) |
| O2—Co1—N3 | 91.53 (5) |
| O1 | 177.67 (6) |
| O1—Co1—N3 | 90.39 (5) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C4—H4 | 0.97 | 2.52 | 3.119 (2) | 120 |
| C4—H4 | 0.97 | 2.56 | 3.167 (2) | 121 |
| C9—H9 | 0.96 | 2.56 | 3.181 (3) | 123 |
| O1—H1⋯N5i | 0.80 (2) | 2.08 (3) | 2.824 (2) | 156 (2) |
| O1 | 0.76 (2) | 2.07 (2) | 2.821 (2) | 168 (3) |
| O2—H2⋯N4iii | 0.78 (2) | 1.97 (2) | 2.7417 (18) | 172 (2) |
| O1 | 0.88 (3) | 2.55 (3) | 3.4146 (16) | 168 (2) |
Symmetry codes: (i) ; (ii) ; (iii) .